RNA–Protein interactions for RNA: ENST00000558469.5

CUX1-216, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-216ENST00000558469 TIMM23O14925 209 aa7.75□□□□□ -1.17
CUX1-216ENST00000558469 ARPC1BO15143 372 aaKnown RBP7.75□□□□□ -1.17
CUX1-216ENST00000558469 TXNL1O43396 289 aa7.75□□□□□ -1.17
CUX1-216ENST00000558469 PGLYRP1O75594 196 aaPredicted RBP7.75□□□□□ -1.17
CUX1-216ENST00000558469 FBP1P09467 338 aa7.75□□□□□ -1.17
CUX1-216ENST00000558469 AKR1C4P17516 323 aa7.75□□□□□ -1.17
CUX1-216ENST00000558469 S100GP29377 79 aa7.75□□□□□ -1.17
CUX1-216ENST00000558469 DUTP33316 252 aaKnown RBP7.75□□□□□ -1.17
CUX1-216ENST00000558469 ARHGDIBP52566 201 aa7.75□□□□□ -1.17
CUX1-216ENST00000558469 PIGPP57054 158 aa7.75□□□□□ -1.17
CUX1-216ENST00000558469 EIF4EBP1Q13541 118 aaPredicted RBP7.75□□□□□ -1.17
CUX1-216ENST00000558469 DEFB112Q30KQ8 113 aa7.75□□□□□ -1.17
CUX1-216ENST00000558469 LCE2CQ5TA81 110 aa7.75□□□□□ -1.17
CUX1-216ENST00000558469 CCDC144NLQ6NUI1 221 aa7.75□□□□□ -1.17
CUX1-216ENST00000558469 ZNF66Q6ZN08 573 aa7.75□□□□□ -1.17
CUX1-216ENST00000558469 TBC1D26Q86UD7 250 aa7.75□□□□□ -1.17
CUX1-216ENST00000558469 ZNF383Q8NA42 475 aa7.75□□□□□ -1.17
CUX1-216ENST00000558469 OR51H1Q8NH63 302 aa7.75□□□□□ -1.17
CUX1-216ENST00000558469 TCTEX1D2Q8WW35 142 aa7.75□□□□□ -1.17
CUX1-216ENST00000558469 HSD17B10Q99714 261 aaKnown RBP7.75□□□□□ -1.17
CUX1-216ENST00000558469 C20orf85Q9H1P6 137 aa7.75□□□□□ -1.17
CUX1-216ENST00000558469 MEGF9Q9H1U4 602 aa7.75□□□□□ -1.17
CUX1-216ENST00000558469 SLC2A9Q9NRM0 540 aa7.75□□□□□ -1.17
CUX1-216ENST00000558469 NUDT15Q9NV35 164 aa7.75□□□□□ -1.17
CUX1-216ENST00000558469 COPZ2Q9P299 210 aa7.75□□□□□ -1.17
CUX1-216ENST00000558469 NSD1Q96L73 2696 aaPredicted RBP7.75□□□□□ -1.17
CUX1-216ENST00000558469 IGHV3-72A0A0B4J1Y9 119 aa7.74□□□□□ -1.17
CUX1-216ENST00000558469 LINC00473A8K010 186 aa7.74□□□□□ -1.17
CUX1-216ENST00000558469 RNF212BA8MTL3 300 aa7.74□□□□□ -1.17
CUX1-216ENST00000558469 MPPED1O15442 326 aa7.74□□□□□ -1.17
CUX1-216ENST00000558469 PTTG1O95997 202 aa7.74□□□□□ -1.17
CUX1-216ENST00000558469 H2AFB2P0C5Z0 115 aa7.74□□□□□ -1.17
CUX1-216ENST00000558469 SPNP16150 400 aa7.74□□□□□ -1.17
CUX1-216ENST00000558469 SRD5A1P18405 259 aa7.74□□□□□ -1.17
CUX1-216ENST00000558469 CD24P25063 80 aa7.74□□□□□ -1.17
CUX1-216ENST00000558469 THBS3P49746 956 aa7.74□□□□□ -1.17
CUX1-216ENST00000558469 RAB13P51153 203 aa7.74□□□□□ -1.17
CUX1-216ENST00000558469 RND3P61587 244 aa7.74□□□□□ -1.17
CUX1-216ENST00000558469 RPL30P62888 115 aaKnown RBP7.74□□□□□ -1.17
CUX1-216ENST00000558469 RGS21Q2M5E4 152 aa7.74□□□□□ -1.17
CUX1-216ENST00000558469 OR2B11Q5JQS5 317 aa7.74□□□□□ -1.17
CUX1-216ENST00000558469 PLET1Q6UQ28 207 aa7.74□□□□□ -1.17
CUX1-216ENST00000558469 KCTD9Q7L273 389 aa7.74□□□□□ -1.17
CUX1-216ENST00000558469 OR8H3Q8N146 312 aa7.74□□□□□ -1.17
CUX1-216ENST00000558469 CENPSQ8N2Z9 138 aa7.74□□□□□ -1.17
CUX1-216ENST00000558469 CCDC71LQ8N9Z2 235 aa7.74□□□□□ -1.17
CUX1-216ENST00000558469 DUSP18Q8NEJ0 188 aa7.74□□□□□ -1.17
CUX1-216ENST00000558469 RBMXL1Q96E39 390 aaKnown RBP7.74□□□□□ -1.17
CUX1-216ENST00000558469 ADTRPQ96IZ2 230 aa7.74□□□□□ -1.17
CUX1-216ENST00000558469 NABP2Q9BQ15 211 aa7.74□□□□□ -1.17
CUX1-216ENST00000558469 BEX1Q9HBH7 125 aa7.74□□□□□ -1.17
CUX1-216ENST00000558469 NUBP2Q9Y5Y2 271 aa7.74□□□□□ -1.17
CUX1-216ENST00000558469 TEX13DA0A0J9YY54 714 aaPredicted RBP7.73□□□□□ -1.17
CUX1-216ENST00000558469 CRYM-AS1A6NIL9 109 aa7.73□□□□□ -1.17
CUX1-216ENST00000558469 H7C2Y5 167 aa7.73□□□□□ -1.17
CUX1-216ENST00000558469 FCGR3BO75015 233 aa7.73□□□□□ -1.17
CUX1-216ENST00000558469 APOA2P02652 100 aa7.73□□□□□ -1.17
CUX1-216ENST00000558469 ANXA7P20073 488 aaKnown RBP7.73□□□□□ -1.17
CUX1-216ENST00000558469 F2RP25116 425 aa7.73□□□□□ -1.17
CUX1-216ENST00000558469 BRS3P32247 399 aa7.73□□□□□ -1.17
CUX1-216ENST00000558469 MC5RP33032 325 aa7.73□□□□□ -1.17
CUX1-216ENST00000558469 RAB25P57735 213 aa7.73□□□□□ -1.17
CUX1-216ENST00000558469 CATR1Q13166 79 aa7.73□□□□□ -1.17
CUX1-216ENST00000558469 SCGB2A2Q13296 93 aa7.73□□□□□ -1.17
CUX1-216ENST00000558469 SLC25A42Q86VD7 318 aa7.73□□□□□ -1.17
CUX1-216ENST00000558469 SGPP2Q8IWX5 399 aa7.73□□□□□ -1.17
CUX1-216ENST00000558469 SIGLECL1Q8N7X8 197 aa7.73□□□□□ -1.17
CUX1-216ENST00000558469 ZFAND2BQ8WV99 257 aa7.73□□□□□ -1.17
CUX1-216ENST00000558469 CAPSLQ8WWF8 208 aa7.73□□□□□ -1.17
CUX1-216ENST00000558469 DDB2Q92466 427 aa7.73□□□□□ -1.17
CUX1-216ENST00000558469 CFHR4Q92496 578 aa7.73□□□□□ -1.17
CUX1-216ENST00000558469 TMEM230Q96A57 120 aa7.73□□□□□ -1.17
CUX1-216ENST00000558469 ZNF48Q96MX3 618 aaPredicted RBP7.73□□□□□ -1.17
CUX1-216ENST00000558469 SSX3Q99909 188 aa7.73□□□□□ -1.17
CUX1-216ENST00000558469 SLC35D1Q9NTN3 355 aa7.73□□□□□ -1.17
CUX1-216ENST00000558469 PRELID3BQ9Y3B1 194 aa7.73□□□□□ -1.17
CUX1-216ENST00000558469 C3orf85A0A1B0GTC6 90 aa7.72□□□□□ -1.17
CUX1-216ENST00000558469 VGLL3A8MV65 326 aa7.72□□□□□ -1.17
CUX1-216ENST00000558469 H0YJW9 148 aa7.72□□□□□ -1.17
CUX1-216ENST00000558469 H3BUX3 64 aa7.72□□□□□ -1.17
CUX1-216ENST00000558469 RAMP3O60896 148 aa7.72□□□□□ -1.17
CUX1-216ENST00000558469 VENTXO95231 258 aa7.72□□□□□ -1.17
CUX1-216ENST00000558469 IGKV1D-33P01593 117 aa7.72□□□□□ -1.17
CUX1-216ENST00000558469 IGKV1-33P01594 117 aa7.72□□□□□ -1.17
CUX1-216ENST00000558469 SNRNP70P08621 437 aaKnown RBP7.72□□□□□ -1.17
CUX1-216ENST00000558469 CD1BP29016 333 aa7.72□□□□□ -1.17
CUX1-216ENST00000558469 DYNLT3P51808 116 aa7.72□□□□□ -1.17
CUX1-216ENST00000558469 BRWD1-AS2P59051 145 aa7.72□□□□□ -1.17
CUX1-216ENST00000558469 TAS2R31P59538 309 aa7.72□□□□□ -1.17
CUX1-216ENST00000558469 TAGLNQ01995 201 aaKnown RBP7.72□□□□□ -1.17
CUX1-216ENST00000558469 CBX3Q13185 183 aa7.72□□□□□ -1.17
CUX1-216ENST00000558469 HES1Q14469 280 aa7.72□□□□□ -1.17
CUX1-216ENST00000558469 HABP2Q14520 560 aaPredicted RBP7.72□□□□□ -1.17
CUX1-216ENST00000558469 RTL8BQ17RB0 113 aa7.72□□□□□ -1.17
CUX1-216ENST00000558469 LRRC75BQ2VPJ9 315 aa7.72□□□□□ -1.17
CUX1-216ENST00000558469 TRIM16LQ309B1 348 aa7.72□□□□□ -1.17
CUX1-216ENST00000558469 SP6Q3SY56 376 aa7.72□□□□□ -1.17
CUX1-216ENST00000558469 TMEM128Q5BJH2 165 aa7.72□□□□□ -1.17
CUX1-216ENST00000558469 CCBE1Q6UXH8 406 aaPredicted RBP7.72□□□□□ -1.17
CUX1-216ENST00000558469 Q6YL49 198 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms