RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 ELF5Q9UKW6 265 aaPredicted RBP9.27□□□□□ -0.93
HERC1-202ENST00000558324 FOXA2Q9Y261 457 aaPredicted RBP9.27□□□□□ -0.93
HERC1-202ENST00000558324 METTL21EPA6NDL7 271 aa9.26□□□□□ -0.93
HERC1-202ENST00000558324 SLC25A17O43808 307 aa9.26□□□□□ -0.93
HERC1-202ENST00000558324 ECI1P42126 302 aa9.26□□□□□ -0.93
HERC1-202ENST00000558324 CD69Q07108 199 aa9.26□□□□□ -0.93
HERC1-202ENST00000558324 ZNF616Q08AN1 781 aa9.26□□□□□ -0.93
HERC1-202ENST00000558324 ZNF260Q3ZCT1 412 aa9.26□□□□□ -0.93
HERC1-202ENST00000558324 ACTBL2Q562R1 376 aa9.26□□□□□ -0.93
HERC1-202ENST00000558324 C19orf54Q5BKX5 351 aa9.26□□□□□ -0.93
HERC1-202ENST00000558324 UNQ5815/PRO19632Q6UWF5 114 aa9.26□□□□□ -0.93
HERC1-202ENST00000558324 PDPNQ86YL7 162 aa9.26□□□□□ -0.93
HERC1-202ENST00000558324 MS4A10Q96PG2 267 aa9.26□□□□□ -0.93
HERC1-202ENST00000558324 PRR25Q96S07 402 aa9.26□□□□□ -0.93
HERC1-202ENST00000558324 GINS4Q9BRT9 223 aa9.26□□□□□ -0.93
HERC1-202ENST00000558324 CABLES2Q9BTV7 478 aa9.26□□□□□ -0.93
HERC1-202ENST00000558324 TXNL4BQ9NX01 149 aaKnown RBP9.26□□□□□ -0.93
HERC1-202ENST00000558324 SDHAF2Q9NX18 166 aa9.26□□□□□ -0.93
HERC1-202ENST00000558324 RBM7Q9Y580 266 aaKnown RBP9.26□□□□□ -0.93
HERC1-202ENST00000558324 IGKV1D-8A0A087WSZ0 117 aa9.25□□□□□ -0.93
HERC1-202ENST00000558324 TRBV6-7A0A0A0MS04 114 aa9.25□□□□□ -0.93
HERC1-202ENST00000558324 I3L521 148 aa9.25□□□□□ -0.93
HERC1-202ENST00000558324 J3QRK9 145 aa9.25□□□□□ -0.93
HERC1-202ENST00000558324 MRPS14O60783 128 aaKnown RBP9.25□□□□□ -0.93
HERC1-202ENST00000558324 SPDEFO95238 335 aa9.25□□□□□ -0.93
HERC1-202ENST00000558324 IGHV3-11P01762 117 aa9.25□□□□□ -0.93
HERC1-202ENST00000558324 OR8U8P0C7N1 319 aa9.25□□□□□ -0.93
HERC1-202ENST00000558324 EGR2P11161 476 aaPredicted RBP9.25□□□□□ -0.93
HERC1-202ENST00000558324 GALP22466 123 aa9.25□□□□□ -0.93
HERC1-202ENST00000558324 CRIP2P52943 208 aaPredicted RBP9.25□□□□□ -0.93
HERC1-202ENST00000558324 TMEM267Q0VDI3 215 aaPredicted RBP9.25□□□□□ -0.93
HERC1-202ENST00000558324 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.25□□□□□ -0.93
HERC1-202ENST00000558324 LFNGQ8NES3 379 aa9.25□□□□□ -0.93
HERC1-202ENST00000558324 FCGR1BQ92637 280 aa9.25□□□□□ -0.93
HERC1-202ENST00000558324 ARPC1AQ92747 370 aa9.25□□□□□ -0.93
HERC1-202ENST00000558324 FLYWCH2Q96CP2 140 aaKnown RBP9.25□□□□□ -0.93
HERC1-202ENST00000558324 C5orf30Q96GV9 206 aa9.25□□□□□ -0.93
HERC1-202ENST00000558324 RNF5Q99942 180 aa9.25□□□□□ -0.93
HERC1-202ENST00000558324 DAPK2Q9UIK4 370 aa9.25□□□□□ -0.93
HERC1-202ENST00000558324 STUB1Q9UNE7 303 aa9.25□□□□□ -0.93
HERC1-202ENST00000558324 NOTOA8MTQ0 251 aa9.24□□□□□ -0.93
HERC1-202ENST00000558324 FGF9P31371 208 aaPredicted RBP9.24□□□□□ -0.93
HERC1-202ENST00000558324 SLURP1P55000 103 aa9.24□□□□□ -0.93
HERC1-202ENST00000558324 TPPP2P59282 170 aa9.24□□□□□ -0.93
HERC1-202ENST00000558324 RUNX1Q01196 453 aa9.24□□□□□ -0.93
HERC1-202ENST00000558324 MXD1Q05195 221 aa9.24□□□□□ -0.93
HERC1-202ENST00000558324 PJVKQ0ZLH3 352 aa9.24□□□□□ -0.93
HERC1-202ENST00000558324 FXYD3Q14802 87 aa9.24□□□□□ -0.93
HERC1-202ENST00000558324 ZNF562Q6V9R5 426 aa9.24□□□□□ -0.93
HERC1-202ENST00000558324 TCTEX1D1Q8N7M0 179 aa9.24□□□□□ -0.93
HERC1-202ENST00000558324 BVESQ8NE79 360 aa9.24□□□□□ -0.93
HERC1-202ENST00000558324 LGALS14Q8TCE9 139 aa9.24□□□□□ -0.93
HERC1-202ENST00000558324 NUDCD2Q8WVJ2 157 aa9.24□□□□□ -0.93
HERC1-202ENST00000558324 HARBI1Q96MB7 349 aa9.24□□□□□ -0.93
HERC1-202ENST00000558324 OR51E2Q9H255 320 aa9.24□□□□□ -0.93
HERC1-202ENST00000558324 ZMAT5Q9UDW3 170 aaKnown RBP9.24□□□□□ -0.93
HERC1-202ENST00000558324 SCOCQ9UIL1 159 aa9.24□□□□□ -0.93
HERC1-202ENST00000558324 SSR3Q9UNL2 185 aa9.24□□□□□ -0.93
HERC1-202ENST00000558324 RRP15Q9Y3B9 282 aaKnown RBP9.24□□□□□ -0.93
HERC1-202ENST00000558324 NUBP2Q9Y5Y2 271 aa9.24□□□□□ -0.93
HERC1-202ENST00000558324 IGHV4OR15-8A0A075B7B6 117 aa9.23□□□□□ -0.93
HERC1-202ENST00000558324 A0A087WW49 117 aa9.23□□□□□ -0.93
HERC1-202ENST00000558324 LOC100506127A0A0U1RQW1 187 aa9.23□□□□□ -0.93
HERC1-202ENST00000558324 TMEM235A6NFC5 223 aa9.23□□□□□ -0.93
HERC1-202ENST00000558324 ARPC1BO15143 372 aaKnown RBP9.23□□□□□ -0.93
HERC1-202ENST00000558324 SHOXO15266 292 aa9.23□□□□□ -0.93
HERC1-202ENST00000558324 RAMP3O60896 148 aa9.23□□□□□ -0.93
HERC1-202ENST00000558324 CNIH1O95406 144 aa9.23□□□□□ -0.93
HERC1-202ENST00000558324 LY86O95711 162 aa9.23□□□□□ -0.93
HERC1-202ENST00000558324 LGALS1P09382 135 aaKnown RBP9.23□□□□□ -0.93
HERC1-202ENST00000558324 CBX3Q13185 183 aa9.23□□□□□ -0.93
HERC1-202ENST00000558324 NEDD8Q15843 81 aa9.23□□□□□ -0.93
HERC1-202ENST00000558324 CDNFQ49AH0 187 aa9.23□□□□□ -0.93
HERC1-202ENST00000558324 ZNF773Q6PK81 442 aa9.23□□□□□ -0.93
HERC1-202ENST00000558324 DCUN1D4Q92564 292 aa9.23□□□□□ -0.93
HERC1-202ENST00000558324 B9D2Q9BPU9 175 aa9.23□□□□□ -0.93
HERC1-202ENST00000558324 ST6GALNAC5Q9BVH7 336 aa9.23□□□□□ -0.93
HERC1-202ENST00000558324 TOLLIPQ9H0E2 274 aa9.23□□□□□ -0.93
HERC1-202ENST00000558324 RNF167Q9H6Y7 350 aa9.23□□□□□ -0.93
HERC1-202ENST00000558324 ZNF355PQ9NSJ1 428 aa9.23□□□□□ -0.93
HERC1-202ENST00000558324 DNAH9Q9NYC9 4486 aa9.23□□□□□ -0.93
HERC1-202ENST00000558324 LINC01619G3V211 115 aa9.22□□□□□ -0.93
HERC1-202ENST00000558324 OVOL1O14753 267 aa9.22□□□□□ -0.93
HERC1-202ENST00000558324 SAP30O75446 220 aa9.22□□□□□ -0.93
HERC1-202ENST00000558324 DIRAS3O95661 229 aa9.22□□□□□ -0.93
HERC1-202ENST00000558324 IGLV2-23P01705 113 aa9.22□□□□□ -0.93
HERC1-202ENST00000558324 TRGV3P03979 118 aa9.22□□□□□ -0.93
HERC1-202ENST00000558324 CLEC2LP0C7M8 214 aa9.22□□□□□ -0.93
HERC1-202ENST00000558324 APELAP0DMC3 54 aa9.22□□□□□ -0.93
HERC1-202ENST00000558324 CD40LGP29965 261 aa9.22□□□□□ -0.93
HERC1-202ENST00000558324 SDC2P34741 201 aa9.22□□□□□ -0.93
HERC1-202ENST00000558324 GNG2P59768 71 aa9.22□□□□□ -0.93
HERC1-202ENST00000558324 SSBP2P81877 361 aaPredicted RBP9.22□□□□□ -0.93
HERC1-202ENST00000558324 DCTN2Q13561 401 aaKnown RBP9.22□□□□□ -0.93
HERC1-202ENST00000558324 RTL8BQ17RB0 113 aa9.22□□□□□ -0.93
HERC1-202ENST00000558324 AKIRIN2Q53H80 203 aa9.22□□□□□ -0.93
HERC1-202ENST00000558324 VAX1Q5SQQ9 334 aa9.22□□□□□ -0.93
HERC1-202ENST00000558324 PYHIN1Q6K0P9 492 aa9.22□□□□□ -0.93
HERC1-202ENST00000558324 SFXN4Q6P4A7 337 aa9.22□□□□□ -0.93
HERC1-202ENST00000558324 H1FOOQ8IZA3 346 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms