RNA–Protein interactions for RNA: ENST00000558088.1

VPS13C-205, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 549 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-205ENST00000558088 ATP5L2Q7Z4Y8 100 aa-0.07□□□□□ -2.42
VPS13C-205ENST00000558088 PLCZ1Q86YW0 608 aa-0.07□□□□□ -2.42
VPS13C-205ENST00000558088 BAP18Q8IXM2 172 aa-0.07□□□□□ -2.42
VPS13C-205ENST00000558088 C10orf67Q8IYJ2 551 aa-0.07□□□□□ -2.42
VPS13C-205ENST00000558088 OR5B17Q8NGF7 314 aa-0.07□□□□□ -2.42
VPS13C-205ENST00000558088 OR2D3Q8NGH3 330 aa-0.07□□□□□ -2.42
VPS13C-205ENST00000558088 CLDND2Q8NHS1 167 aa-0.07□□□□□ -2.42
VPS13C-205ENST00000558088 FAM45AQ8TCE6 357 aa-0.07□□□□□ -2.42
VPS13C-205ENST00000558088 ACOT12Q8WYK0 555 aa-0.07□□□□□ -2.42
VPS13C-205ENST00000558088 LRRC45Q96CN5 670 aa-0.07□□□□□ -2.42
VPS13C-205ENST00000558088 LRRC39Q96DD0 335 aa-0.07□□□□□ -2.42
VPS13C-205ENST00000558088 SYT4Q9H2B2 425 aa-0.07□□□□□ -2.42
VPS13C-205ENST00000558088 FBXO44Q9H4M3 255 aa-0.07□□□□□ -2.42
VPS13C-205ENST00000558088 MS4A12Q9NXJ0 267 aa-0.07□□□□□ -2.42
VPS13C-205ENST00000558088 CD300AQ9UGN4 299 aa-0.07□□□□□ -2.42
VPS13C-205ENST00000558088 POLR3HQ9Y535 204 aaPredicted RBP-0.07□□□□□ -2.42
VPS13C-205ENST00000558088 SNX10Q9Y5X0 201 aa-0.07□□□□□ -2.42
VPS13C-205ENST00000558088 SETD5Q9C0A6 1442 aa-0.07□□□□□ -2.42
VPS13C-205ENST00000558088 SSPOA2VEC9 5147 aa-0.07□□□□□ -2.42
VPS13C-205ENST00000558088 SYNE1Q8NF91 8797 aaKnown RBP-0.07□□□□□ -2.42
VPS13C-205ENST00000558088 ZFC3H1O60293 1989 aaKnown RBP-0.08□□□□□ -2.42
VPS13C-205ENST00000558088 TMEM269A0A1B0GVZ9 245 aa-0.08□□□□□ -2.42
VPS13C-205ENST00000558088 MEIS3P1A6NDR6 274 aa-0.08□□□□□ -2.42
VPS13C-205ENST00000558088 TRIM64CA6NLI5 447 aa-0.08□□□□□ -2.42
VPS13C-205ENST00000558088 CLDN25C9JDP6 229 aa-0.08□□□□□ -2.42
VPS13C-205ENST00000558088 M0QYV0 167 aa-0.08□□□□□ -2.42
VPS13C-205ENST00000558088 GPR171O14626 319 aa-0.08□□□□□ -2.42
VPS13C-205ENST00000558088 ATP8B1O43520 1251 aa-0.08□□□□□ -2.42
VPS13C-205ENST00000558088 ARL6IP5O75915 188 aa-0.08□□□□□ -2.42
VPS13C-205ENST00000558088 SRMP19623 302 aa-0.08□□□□□ -2.42
VPS13C-205ENST00000558088 OPRM1P35372 400 aa-0.08□□□□□ -2.42
VPS13C-205ENST00000558088 UGT2B10P36537 528 aa-0.08□□□□□ -2.42
VPS13C-205ENST00000558088 RPL28P46779 137 aaKnown RBP-0.08□□□□□ -2.42
VPS13C-205ENST00000558088 PSMD7P51665 324 aa-0.08□□□□□ -2.42
VPS13C-205ENST00000558088 LINC00313P59037 77 aa-0.08□□□□□ -2.42
VPS13C-205ENST00000558088 AP1S1P61966 158 aa-0.08□□□□□ -2.42
VPS13C-205ENST00000558088 TSPAN5P62079 268 aa-0.08□□□□□ -2.42
VPS13C-205ENST00000558088 VSNL1P62760 191 aa-0.08□□□□□ -2.42
VPS13C-205ENST00000558088 HIST1H4AP62805 103 aaKnown RBP-0.08□□□□□ -2.42
VPS13C-205ENST00000558088 HERVK_113P63121 156 aa-0.08□□□□□ -2.42
VPS13C-205ENST00000558088 USF2Q15853 346 aaPredicted RBP-0.08□□□□□ -2.42
VPS13C-205ENST00000558088 C10orf55Q5SWW7 151 aa-0.08□□□□□ -2.42
VPS13C-205ENST00000558088 XKRXQ6PP77 449 aa-0.08□□□□□ -2.42
VPS13C-205ENST00000558088 LRRC34Q8IZ02 419 aa-0.08□□□□□ -2.42
VPS13C-205ENST00000558088 OR8B3Q8NGG8 313 aa-0.08□□□□□ -2.42
VPS13C-205ENST00000558088 ZNF675Q8TD23 568 aa-0.08□□□□□ -2.42
VPS13C-205ENST00000558088 AQP3Q92482 292 aa-0.08□□□□□ -2.42
VPS13C-205ENST00000558088 ACY3Q96HD9 319 aa-0.08□□□□□ -2.42
VPS13C-205ENST00000558088 EIF5A2Q9GZV4 153 aaKnown RBP-0.08□□□□□ -2.42
VPS13C-205ENST00000558088 GAL3ST2Q9H3Q3 398 aa-0.08□□□□□ -2.42
VPS13C-205ENST00000558088 RPRD1BQ9NQG5 326 aaKnown RBP-0.08□□□□□ -2.42
VPS13C-205ENST00000558088 NAV1Q8NEY1 1877 aa-0.08□□□□□ -2.42
VPS13C-205ENST00000558088 PTPRBP23467 1997 aa-0.08□□□□□ -2.42
VPS13C-205ENST00000558088 DSCAML1Q8TD84 2053 aa-0.09□□□□□ -2.42
VPS13C-205ENST00000558088 ADAMTSL1Q8N6G6 1762 aa-0.09□□□□□ -2.42
VPS13C-205ENST00000558088 GPR98Q8WXG9 6306 aa-0.09□□□□□ -2.42
VPS13C-205ENST00000558088 NEURL4Q96JN8 1562 aa-0.09□□□□□ -2.42
VPS13C-205ENST00000558088 TRAV7A0A075B6U4 112 aa-0.09□□□□□ -2.42
VPS13C-205ENST00000558088 A0A0J9YW62 118 aa-0.09□□□□□ -2.42
VPS13C-205ENST00000558088 A0A1W2PPV4 95 aa-0.09□□□□□ -2.42
VPS13C-205ENST00000558088 C21orf140B9A014 251 aa-0.09□□□□□ -2.42
VPS13C-205ENST00000558088 CDIPTO14735 213 aa-0.09□□□□□ -2.42
VPS13C-205ENST00000558088 COCHO43405 550 aa-0.09□□□□□ -2.42
VPS13C-205ENST00000558088 MT-CO2P00403 227 aa-0.09□□□□□ -2.42
VPS13C-205ENST00000558088 LGALS1P09382 135 aaKnown RBP-0.09□□□□□ -2.42
VPS13C-205ENST00000558088 TFPTP0C1Z6 253 aa-0.09□□□□□ -2.42
VPS13C-205ENST00000558088 ATP5J2P56134 94 aa-0.09□□□□□ -2.42
VPS13C-205ENST00000558088 RBM11P57052 281 aaKnown RBP-0.09□□□□□ -2.42
VPS13C-205ENST00000558088 RAB14P61106 215 aa-0.09□□□□□ -2.42
VPS13C-205ENST00000558088 RUNX1Q01196 453 aa-0.09□□□□□ -2.42
VPS13C-205ENST00000558088 CD164Q04900 197 aa-0.09□□□□□ -2.42
VPS13C-205ENST00000558088 MIAQ16674 131 aa-0.09□□□□□ -2.42
VPS13C-205ENST00000558088 PDPK2PQ6A1A2 396 aa-0.09□□□□□ -2.42
VPS13C-205ENST00000558088 AHSA2Q719I0 299 aa-0.09□□□□□ -2.42
VPS13C-205ENST00000558088 LINC00471Q8N535 108 aa-0.09□□□□□ -2.42
VPS13C-205ENST00000558088 ZNF676Q8N7Q3 588 aa-0.09□□□□□ -2.42
VPS13C-205ENST00000558088 OR51H1Q8NH63 302 aa-0.09□□□□□ -2.42
VPS13C-205ENST00000558088 DYNC2LI1Q8TCX1 351 aa-0.09□□□□□ -2.42
VPS13C-205ENST00000558088 AGR3Q8TD06 166 aa-0.09□□□□□ -2.42
VPS13C-205ENST00000558088 OR5P2Q8WZ92 322 aa-0.09□□□□□ -2.42
VPS13C-205ENST00000558088 HINT2Q9BX68 163 aa-0.09□□□□□ -2.42
VPS13C-205ENST00000558088 TMEM222Q9H0R3 208 aa-0.09□□□□□ -2.42
VPS13C-205ENST00000558088 MEGF8Q7Z7M0 2845 aa-0.09□□□□□ -2.42
VPS13C-205ENST00000558088 LAMA4Q16363 1823 aa-0.09□□□□□ -2.42
VPS13C-205ENST00000558088 SYNRGQ9UMZ2 1314 aa-0.1□□□□□ -2.42
VPS13C-205ENST00000558088 GLI3P10071 1580 aa-0.1□□□□□ -2.42
VPS13C-205ENST00000558088 NCR3O14931 201 aa-0.1□□□□□ -2.43
VPS13C-205ENST00000558088 NDUFB2O95178 105 aa-0.1□□□□□ -2.43
VPS13C-205ENST00000558088 HBZP02008 142 aa-0.1□□□□□ -2.43
VPS13C-205ENST00000558088 PMP2P02689 132 aa-0.1□□□□□ -2.43
VPS13C-205ENST00000558088 STAG3L2P0CL84 134 aa-0.1□□□□□ -2.43
VPS13C-205ENST00000558088 F8A1P23610 371 aa-0.1□□□□□ -2.43
VPS13C-205ENST00000558088 MSNP26038 577 aaKnown RBP-0.1□□□□□ -2.43
VPS13C-205ENST00000558088 OR10J1P30954 320 aa-0.1□□□□□ -2.43
VPS13C-205ENST00000558088 HSPA9P38646 679 aaKnown RBP-0.1□□□□□ -2.43
VPS13C-205ENST00000558088 BTN3A2P78410 334 aa-0.1□□□□□ -2.43
VPS13C-205ENST00000558088 BSXQ3C1V8 233 aa-0.1□□□□□ -2.43
VPS13C-205ENST00000558088 OR10J3Q5JRS4 329 aa-0.1□□□□□ -2.43
VPS13C-205ENST00000558088 Q6ZT83 130 aa-0.1□□□□□ -2.43
VPS13C-205ENST00000558088 SPATA24Q86W54 205 aa-0.1□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms