RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 ZBTB34Q8NCN2 500 aa17.05■□□□□ 0.32
CASC4-204ENST00000557945 RBMXL1Q96E39 390 aaKnown RBP17.05■□□□□ 0.32
CASC4-204ENST00000557945 AKR1E2Q96JD6 320 aa17.05■□□□□ 0.32
CASC4-204ENST00000557945 PRRT1Q99946 306 aa17.05■□□□□ 0.32
CASC4-204ENST00000557945 SCP2D1Q9UJQ7 156 aa17.05■□□□□ 0.32
CASC4-204ENST00000557945 H0YJW9 148 aa17.04■□□□□ 0.32
CASC4-204ENST00000557945 GPR137BO60478 399 aa17.04■□□□□ 0.32
CASC4-204ENST00000557945 APOA2P02652 100 aa17.04■□□□□ 0.32
CASC4-204ENST00000557945 RNASE1P07998 156 aaKnown RBP17.04■□□□□ 0.32
CASC4-204ENST00000557945 MC5RP33032 325 aa17.04■□□□□ 0.32
CASC4-204ENST00000557945 DUTP33316 252 aaKnown RBP17.04■□□□□ 0.32
CASC4-204ENST00000557945 FBLN7Q53RD9 439 aa17.04■□□□□ 0.32
CASC4-204ENST00000557945 C16orf87Q6PH81 154 aa17.04■□□□□ 0.32
CASC4-204ENST00000557945 CCBE1Q6UXH8 406 aaPredicted RBP17.04■□□□□ 0.32
CASC4-204ENST00000557945 OR5AN1Q8NGI8 311 aa17.04■□□□□ 0.32
CASC4-204ENST00000557945 OR2T10Q8NGZ9 312 aa17.04■□□□□ 0.32
CASC4-204ENST00000557945 DEDD2Q8WXF8 326 aa17.04■□□□□ 0.32
CASC4-204ENST00000557945 ADTRPQ96IZ2 230 aa17.04■□□□□ 0.32
CASC4-204ENST00000557945 GPHA2Q96T91 129 aa17.04■□□□□ 0.32
CASC4-204ENST00000557945 CUBNO60494 3623 aa17.04■□□□□ 0.32
CASC4-204ENST00000557945 GPR31O00270 319 aa17.03■□□□□ 0.32
CASC4-204ENST00000557945 MOSP00540 346 aa17.03■□□□□ 0.32
CASC4-204ENST00000557945 UCP3P55916 312 aa17.03■□□□□ 0.32
CASC4-204ENST00000557945 IDO2Q6ZQW0 420 aa17.03■□□□□ 0.32
CASC4-204ENST00000557945 SLC38A6Q8IZM9 456 aa17.03■□□□□ 0.32
CASC4-204ENST00000557945 EAF1Q96JC9 268 aaPredicted RBP17.03■□□□□ 0.32
CASC4-204ENST00000557945 HSD17B10Q99714 261 aaKnown RBP17.03■□□□□ 0.32
CASC4-204ENST00000557945 SLC35D1Q9NTN3 355 aa17.03■□□□□ 0.32
CASC4-204ENST00000557945 WASHC3Q9Y3C0 194 aa17.03■□□□□ 0.32
CASC4-204ENST00000557945 PHLDA2Q53GA4 152 aa17.02■□□□□ 0.32
CASC4-204ENST00000557945 LIAT1Q6ZQX7 453 aa17.02■□□□□ 0.32
CASC4-204ENST00000557945 KCTD9Q7L273 389 aa17.02■□□□□ 0.32
CASC4-204ENST00000557945 CMTM1Q8IZ96 169 aa17.02■□□□□ 0.32
CASC4-204ENST00000557945 BVESQ8NE79 360 aa17.02■□□□□ 0.32
CASC4-204ENST00000557945 MARCH1Q8TCQ1 289 aa17.02■□□□□ 0.32
CASC4-204ENST00000557945 TCTEX1D2Q8WW35 142 aa17.02■□□□□ 0.32
CASC4-204ENST00000557945 RSRP1Q9BUV0 290 aa17.02■□□□□ 0.32
CASC4-204ENST00000557945 SLC2A8Q9NY64 477 aa17.02■□□□□ 0.32
CASC4-204ENST00000557945 LINC00473A8K010 186 aa17.02■□□□□ 0.31
CASC4-204ENST00000557945 CENPXA8MT69 81 aa17.02■□□□□ 0.31
CASC4-204ENST00000557945 S100GP29377 79 aa17.02■□□□□ 0.31
CASC4-204ENST00000557945 RPL30P62888 115 aaKnown RBP17.02■□□□□ 0.31
CASC4-204ENST00000557945 EIF4EBP1Q13541 118 aaPredicted RBP17.02■□□□□ 0.31
CASC4-204ENST00000557945 EBI3Q14213 229 aa17.02■□□□□ 0.31
CASC4-204ENST00000557945 OR2B11Q5JQS5 317 aa17.02■□□□□ 0.31
CASC4-204ENST00000557945 ZNF66Q6ZN08 573 aa17.02■□□□□ 0.31
CASC4-204ENST00000557945 SLC25A33Q9BSK2 321 aa17.02■□□□□ 0.31
CASC4-204ENST00000557945 RAB18Q9NP72 206 aa17.02■□□□□ 0.31
CASC4-204ENST00000557945 PRELID3BQ9Y3B1 194 aa17.02■□□□□ 0.31
CASC4-204ENST00000557945 NF1P21359 2839 aa17.01■□□□□ 0.31
CASC4-204ENST00000557945 FAM181BA6NEQ2 426 aa17.01■□□□□ 0.31
CASC4-204ENST00000557945 CHST1O43916 411 aa17.01■□□□□ 0.31
CASC4-204ENST00000557945 OR2F2O95006 317 aa17.01■□□□□ 0.31
CASC4-204ENST00000557945 CRYBA1P05813 215 aa17.01■□□□□ 0.31
CASC4-204ENST00000557945 PI3P19957 117 aa17.01■□□□□ 0.31
CASC4-204ENST00000557945 ECI1P42126 302 aa17.01■□□□□ 0.31
CASC4-204ENST00000557945 TAGLNQ01995 201 aaKnown RBP17.01■□□□□ 0.31
CASC4-204ENST00000557945 CBX3Q13185 183 aa17.01■□□□□ 0.31
CASC4-204ENST00000557945 RTL8BQ17RB0 113 aa17.01■□□□□ 0.31
CASC4-204ENST00000557945 ABCA11PQ4W5N1 156 aa17.01■□□□□ 0.31
CASC4-204ENST00000557945 DHRS7BQ6IAN0 325 aaPredicted RBP17.01■□□□□ 0.31
CASC4-204ENST00000557945 PDPNQ86YL7 162 aa17.01■□□□□ 0.31
CASC4-204ENST00000557945 OR13C8Q8NGS7 320 aa17.01■□□□□ 0.31
CASC4-204ENST00000557945 OR51H1Q8NH63 302 aa17.01■□□□□ 0.31
CASC4-204ENST00000557945 ZFAND1Q8TCF1 268 aa17.01■□□□□ 0.31
CASC4-204ENST00000557945 MRGPRFQ96AM1 343 aa17.01■□□□□ 0.31
CASC4-204ENST00000557945 RBM14Q96PK6 669 aaKnown RBP17.01■□□□□ 0.31
CASC4-204ENST00000557945 NAP1L6A6NFF2 107 aa17■□□□□ 0.31
CASC4-204ENST00000557945 FCGR3BO75015 233 aa17■□□□□ 0.31
CASC4-204ENST00000557945 PGLYRP1O75594 196 aaPredicted RBP17■□□□□ 0.31
CASC4-204ENST00000557945 CATR1Q13166 79 aa17■□□□□ 0.31
CASC4-204ENST00000557945 DDB2Q92466 427 aa17■□□□□ 0.31
CASC4-204ENST00000557945 NCBP2LA6PVI3 153 aaKnown RBP16.99■□□□□ 0.31
CASC4-204ENST00000557945 UPK1BO75841 260 aa16.99■□□□□ 0.31
CASC4-204ENST00000557945 IGKV1-16P04430 117 aa16.99■□□□□ 0.31
CASC4-204ENST00000557945 RLN1P04808 185 aa16.99■□□□□ 0.31
CASC4-204ENST00000557945 RRASP10301 218 aa16.99■□□□□ 0.31
CASC4-204ENST00000557945 C16orf82Q7Z2V1 217 aa16.99■□□□□ 0.31
CASC4-204ENST00000557945 FLYWCH2Q96CP2 140 aaKnown RBP16.99■□□□□ 0.31
CASC4-204ENST00000557945 RITA1Q96K30 269 aa16.99■□□□□ 0.31
CASC4-204ENST00000557945 TSC22D3Q99576 134 aa16.99■□□□□ 0.31
CASC4-204ENST00000557945 C7orf50Q9BRJ6 194 aaKnown RBP16.99■□□□□ 0.31
CASC4-204ENST00000557945 C14orf166Q9Y224 244 aaKnown RBP16.99■□□□□ 0.31
CASC4-204ENST00000557945 MOB4Q9Y3A3 225 aa16.99■□□□□ 0.31
CASC4-204ENST00000557945 C2CD3Q4AC94 2353 aa16.98■□□□□ 0.31
CASC4-204ENST00000557945 RNF212BA8MTL3 300 aa16.98■□□□□ 0.31
CASC4-204ENST00000557945 PEX14O75381 377 aa16.98■□□□□ 0.31
CASC4-204ENST00000557945 RIPPLY3P57055 190 aa16.98■□□□□ 0.31
CASC4-204ENST00000557945 RPS16P62249 146 aaKnown RBP16.98■□□□□ 0.31
CASC4-204ENST00000557945 SURF2Q15527 256 aaPredicted RBP16.98■□□□□ 0.31
CASC4-204ENST00000557945 MMDQ15546 238 aa16.98■□□□□ 0.31
CASC4-204ENST00000557945 Q8N6K4 173 aa16.98■□□□□ 0.31
CASC4-204ENST00000557945 ZFAND2BQ8WV99 257 aa16.98■□□□□ 0.31
CASC4-204ENST00000557945 ZNF486Q96H40 463 aaPredicted RBP16.98■□□□□ 0.31
CASC4-204ENST00000557945 SCGB3A2Q96PL1 93 aa16.98■□□□□ 0.31
CASC4-204ENST00000557945 SLC2A9Q9NRM0 540 aa16.98■□□□□ 0.31
CASC4-204ENST00000557945 PLA2G10O15496 165 aa16.97■□□□□ 0.31
CASC4-204ENST00000557945 CRYZL1O95825 349 aa16.97■□□□□ 0.31
CASC4-204ENST00000557945 CTSDP07339 412 aaPredicted RBP16.97■□□□□ 0.31
CASC4-204ENST00000557945 CCR6P51684 374 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms