RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 BCL2L11O43521 198 aa6.04□□□□□ -1.44
SPG11-204ENST00000557866 NDUFB3O43676 98 aa6.04□□□□□ -1.44
SPG11-204ENST00000557866 NDUFA2O43678 99 aa6.04□□□□□ -1.44
SPG11-204ENST00000557866 ATP6V1G1O75348 118 aa6.04□□□□□ -1.44
SPG11-204ENST00000557866 SCGB1D2O95969 90 aa6.04□□□□□ -1.44
SPG11-204ENST00000557866 SERPINE2P07093 398 aa6.04□□□□□ -1.44
SPG11-204ENST00000557866 P0C879 139 aa6.04□□□□□ -1.44
SPG11-204ENST00000557866 HKR1P10072 659 aa6.04□□□□□ -1.44
SPG11-204ENST00000557866 VDAC1P21796 283 aa6.04□□□□□ -1.44
SPG11-204ENST00000557866 NFYBP25208 207 aa6.04□□□□□ -1.44
SPG11-204ENST00000557866 HTR2BP41595 481 aa6.04□□□□□ -1.44
SPG11-204ENST00000557866 LPAR6P43657 344 aa6.04□□□□□ -1.44
SPG11-204ENST00000557866 DLX6P56179 175 aa6.04□□□□□ -1.44
SPG11-204ENST00000557866 MRPS11P82912 194 aaKnown RBP6.04□□□□□ -1.44
SPG11-204ENST00000557866 EXOSC2Q13868 293 aaKnown RBP6.04□□□□□ -1.44
SPG11-204ENST00000557866 ESCO2Q56NI9 601 aa6.04□□□□□ -1.44
SPG11-204ENST00000557866 RPL39P5Q59GN2 51 aa6.04□□□□□ -1.44
SPG11-204ENST00000557866 LRRC10Q5BKY1 277 aa6.04□□□□□ -1.44
SPG11-204ENST00000557866 OR2B11Q5JQS5 317 aa6.04□□□□□ -1.44
SPG11-204ENST00000557866 AVPI1Q5T686 147 aa6.04□□□□□ -1.44
SPG11-204ENST00000557866 NCR3LG1Q68D85 454 aa6.04□□□□□ -1.44
SPG11-204ENST00000557866 ZNF66Q6ZN08 573 aa6.04□□□□□ -1.44
SPG11-204ENST00000557866 FOXRED2Q8IWF2 684 aa6.04□□□□□ -1.44
SPG11-204ENST00000557866 ODF3L1Q8IXM7 274 aa6.04□□□□□ -1.44
SPG11-204ENST00000557866 C11orf42Q8N5U0 333 aa6.04□□□□□ -1.44
SPG11-204ENST00000557866 FAM216AQ8WUB2 273 aa6.04□□□□□ -1.44
SPG11-204ENST00000557866 NEU4Q8WWR8 484 aaPredicted RBP6.04□□□□□ -1.44
SPG11-204ENST00000557866 LSM10Q969L4 123 aaKnown RBP6.04□□□□□ -1.44
SPG11-204ENST00000557866 BSCL2Q96G97 398 aaPredicted RBP6.04□□□□□ -1.44
SPG11-204ENST00000557866 ZNF251Q9BRH9 671 aa6.04□□□□□ -1.44
SPG11-204ENST00000557866 ABHD14AQ9BUJ0 271 aa6.04□□□□□ -1.44
SPG11-204ENST00000557866 RAB1BQ9H0U4 201 aa6.04□□□□□ -1.44
SPG11-204ENST00000557866 PLEKHF2Q9H8W4 249 aa6.04□□□□□ -1.44
SPG11-204ENST00000557866 UBTD1Q9HAC8 227 aa6.04□□□□□ -1.44
SPG11-204ENST00000557866 CYTL1Q9NRR1 136 aa6.04□□□□□ -1.44
SPG11-204ENST00000557866 LIN7CQ9NUP9 197 aaKnown RBP6.04□□□□□ -1.44
SPG11-204ENST00000557866 ZNRD1Q9P1U0 126 aa6.04□□□□□ -1.44
SPG11-204ENST00000557866 GAB2Q9UQC2 676 aa6.04□□□□□ -1.44
SPG11-204ENST00000557866 LAMP3Q9UQV4 416 aa6.04□□□□□ -1.44
SPG11-204ENST00000557866 POMT1Q9Y6A1 747 aa6.04□□□□□ -1.44
SPG11-204ENST00000557866 DSCAMO60469 2012 aa6.04□□□□□ -1.44
SPG11-204ENST00000557866 HCFC1P51610 2035 aa6.03□□□□□ -1.44
SPG11-204ENST00000557866 A0A1B0GU03 582 aa6.03□□□□□ -1.44
SPG11-204ENST00000557866 RPS10-NUDT3A0A1W2PQS6 291 aa6.03□□□□□ -1.44
SPG11-204ENST00000557866 RNF212BA8MTL3 300 aa6.03□□□□□ -1.44
SPG11-204ENST00000557866 NDUFS7O75251 213 aa6.03□□□□□ -1.44
SPG11-204ENST00000557866 S1PR2O95136 353 aa6.03□□□□□ -1.44
SPG11-204ENST00000557866 TMEM50AO95807 157 aa6.03□□□□□ -1.44
SPG11-204ENST00000557866 CLDN1O95832 211 aa6.03□□□□□ -1.44
SPG11-204ENST00000557866 SLC25A6P12236 298 aa6.03□□□□□ -1.44
SPG11-204ENST00000557866 DAOP14920 347 aa6.03□□□□□ -1.44
SPG11-204ENST00000557866 C4BPBP20851 252 aa6.03□□□□□ -1.44
SPG11-204ENST00000557866 DUTP33316 252 aaKnown RBP6.03□□□□□ -1.44
SPG11-204ENST00000557866 NKX2-1P43699 371 aaPredicted RBP6.03□□□□□ -1.44
SPG11-204ENST00000557866 GPR12P47775 334 aa6.03□□□□□ -1.44
SPG11-204ENST00000557866 GNG10P50151 68 aa6.03□□□□□ -1.44
SPG11-204ENST00000557866 POLR2GP62487 172 aaKnown RBP eCLIP6.03□□□□□ -1.44
SPG11-204ENST00000557866 SRSF1Q07955 248 aaKnown RBP eCLIP6.03□□□□□ -1.44
SPG11-204ENST00000557866 ZNF816Q0VGE8 651 aaPredicted RBP6.03□□□□□ -1.44
SPG11-204ENST00000557866 TMEM155Q4W5P6 130 aa6.03□□□□□ -1.44
SPG11-204ENST00000557866 KIAA2026Q5HYC2 2103 aa6.03□□□□□ -1.44
SPG11-204ENST00000557866 LCE5AQ5TCM9 118 aa6.03□□□□□ -1.44
SPG11-204ENST00000557866 HEPN1Q6WQI6 88 aa6.03□□□□□ -1.44
SPG11-204ENST00000557866 SLC51BQ86UW2 128 aa6.03□□□□□ -1.44
SPG11-204ENST00000557866 SPAG16Q8N0X2 631 aa6.03□□□□□ -1.44
SPG11-204ENST00000557866 INO80EQ8NBZ0 244 aaPredicted RBP6.03□□□□□ -1.44
SPG11-204ENST00000557866 TCTEX1D2Q8WW35 142 aa6.03□□□□□ -1.44
SPG11-204ENST00000557866 H1FXQ92522 213 aaKnown RBP6.03□□□□□ -1.44
SPG11-204ENST00000557866 ZNF714Q96N38 554 aa6.03□□□□□ -1.44
SPG11-204ENST00000557866 HSD17B10Q99714 261 aaKnown RBP6.03□□□□□ -1.44
SPG11-204ENST00000557866 SPIN2AQ99865 258 aa6.03□□□□□ -1.44
SPG11-204ENST00000557866 SPIN2BQ9BPZ2 258 aa6.03□□□□□ -1.44
SPG11-204ENST00000557866 SAA2-SAA4A0A096LPE2 208 aa6.02□□□□□ -1.45
SPG11-204ENST00000557866 E5RGE8 158 aa6.02□□□□□ -1.45
SPG11-204ENST00000557866 M0R1X1 148 aa6.02□□□□□ -1.45
SPG11-204ENST00000557866 ST8SIA3O43173 380 aa6.02□□□□□ -1.45
SPG11-204ENST00000557866 PPIHO43447 177 aaKnown RBP6.02□□□□□ -1.45
SPG11-204ENST00000557866 NXPH3O95157 252 aa6.02□□□□□ -1.45
SPG11-204ENST00000557866 IFNA7P01567 189 aa6.02□□□□□ -1.45
SPG11-204ENST00000557866 RLN2P04090 185 aa6.02□□□□□ -1.45
SPG11-204ENST00000557866 PET100P0DJ07 73 aa6.02□□□□□ -1.45
SPG11-204ENST00000557866 SAA2P0DJI9 122 aaPredicted RBP6.02□□□□□ -1.45
SPG11-204ENST00000557866 RPL12P30050 165 aaKnown RBP6.02□□□□□ -1.45
SPG11-204ENST00000557866 G6PCP35575 357 aa6.02□□□□□ -1.45
SPG11-204ENST00000557866 CDKN1AP38936 164 aa6.02□□□□□ -1.45
SPG11-204ENST00000557866 RAB7AP51149 207 aa6.02□□□□□ -1.45
SPG11-204ENST00000557866 PAX9P55771 341 aa6.02□□□□□ -1.45
SPG11-204ENST00000557866 SMCO1Q147U7 214 aa6.02□□□□□ -1.45
SPG11-204ENST00000557866 TMEM30BQ3MIR4 351 aa6.02□□□□□ -1.45
SPG11-204ENST00000557866 MIDNQ504T8 468 aa6.02□□□□□ -1.45
SPG11-204ENST00000557866 THOC7Q6I9Y2 204 aaKnown RBP6.02□□□□□ -1.45
SPG11-204ENST00000557866 CLEC9AQ6UXN8 241 aa6.02□□□□□ -1.45
SPG11-204ENST00000557866 SLC25A48Q6ZT89 311 aaKnown RBP6.02□□□□□ -1.45
SPG11-204ENST00000557866 OR10A7Q8NGE5 316 aa6.02□□□□□ -1.45
SPG11-204ENST00000557866 PCNPQ8WW12 178 aaKnown RBP6.02□□□□□ -1.45
SPG11-204ENST00000557866 IGFBPL1Q8WX77 278 aa6.02□□□□□ -1.45
SPG11-204ENST00000557866 ST8SIA2Q92186 375 aa6.02□□□□□ -1.45
SPG11-204ENST00000557866 DDB2Q92466 427 aa6.02□□□□□ -1.45
SPG11-204ENST00000557866 RBMXL1Q96E39 390 aaKnown RBP6.02□□□□□ -1.45
SPG11-204ENST00000557866 ARPC5LQ9BPX5 153 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms