RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 UQCC1Q9NVA1 299 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 HSPB8Q9UJY1 196 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 GNG8Q9UK08 70 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 RBM7Q9Y580 266 aaKnown RBP1.2□□□□□ -2.22
HIF1A-212ENST00000557538 SNX10Q9Y5X0 201 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 RLFQ13129 1914 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 PTPRMP28827 1452 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 SCN11AQ9UI33 1791 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 TNS2Q63HR2 1409 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 CICQ96RK0 1608 aaPredicted RBP1.2□□□□□ -2.22
HIF1A-212ENST00000557538 TRPM7Q96QT4 1865 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 GLYATL1P3A0A0U1RQE8 302 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 SMCO3A2RU48 225 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 C7orf66A4D0T2 115 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 LRP5LA4QPB2 252 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 KLLNB2CW77 178 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 IDSB3KWA1 339 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 PHF1O43189 567 aaPredicted RBP1.2□□□□□ -2.22
HIF1A-212ENST00000557538 RAD51CO43502 376 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 CXCL13O43927 109 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 FAM189A1O60320 539 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 ALOX12BO75342 701 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 MOSP00540 346 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 GCGP01275 180 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 HSPB1P04792 205 aaKnown RBP1.2□□□□□ -2.22
HIF1A-212ENST00000557538 SERPINA7P05543 415 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 CTSDP07339 412 aaPredicted RBP1.2□□□□□ -2.22
HIF1A-212ENST00000557538 SCTP09683 121 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 IGLC1P0CG04 106 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 UBBP0CG47 229 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 ZNF19P17023 458 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 PVALBP20472 110 aaPredicted RBP1.2□□□□□ -2.22
HIF1A-212ENST00000557538 CRHBPP24387 322 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 ATP6V0CP27449 155 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 NTSP30990 170 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 LHX2P50458 406 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 TPI1P60174 286 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 HSPE1P61604 102 aaKnown RBP1.2□□□□□ -2.22
HIF1A-212ENST00000557538 LYZP61626 148 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 GNG11P61952 73 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 PAFAH1B2P68402 229 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 HIST1H3AP68431 136 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 H3F3AP84243 136 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 CD164Q04900 197 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 DIAPH2-AS1Q14236 149 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 QPRTQ15274 297 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 SNRNP35Q16560 246 aaKnown RBP1.2□□□□□ -2.22
HIF1A-212ENST00000557538 TMEM215Q68D42 235 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 ZFAND6Q6FIF0 208 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 C22orf42Q6IC83 251 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 EPGNQ6UW88 154 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 HEPN1Q6WQI6 88 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 IL34Q6ZMJ4 242 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 HIST2H3AQ71DI3 136 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 C10orf107Q8IVU9 208 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 C11orf53Q8IXP5 236 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 INO80EQ8NBZ0 244 aaPredicted RBP1.2□□□□□ -2.22
HIF1A-212ENST00000557538 OR52I1Q8NGK6 324 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 OR2T27Q8NH04 317 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 TERB2Q8NHR7 220 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 LINC01006Q8NI28 216 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 PLPPR1Q8TBJ4 325 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 ZNF431Q8TF32 576 aaPredicted RBP1.2□□□□□ -2.22
HIF1A-212ENST00000557538 CARD19Q96LW7 228 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 LINC00477Q96M19 166 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 OR2M2Q96R28 347 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 SDF2Q99470 211 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 TBX5Q99593 518 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 SPIN2AQ99865 258 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 FOXC2Q99958 501 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 MICU1Q9BPX6 476 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 SPIN2BQ9BPZ2 258 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 KCTD14Q9BQ13 255 aaPredicted RBP1.2□□□□□ -2.22
HIF1A-212ENST00000557538 MRPL57Q9BQC6 102 aaKnown RBP1.2□□□□□ -2.22
HIF1A-212ENST00000557538 MIEN1Q9BRT3 115 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 OR51I1Q9H343 314 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 CDC42EP4Q9H3Q1 356 aaKnown RBP1.2□□□□□ -2.22
HIF1A-212ENST00000557538 PRTFDC1Q9NRG1 225 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 NAT8Q9UHE5 227 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 RCL1Q9Y2P8 373 aaKnown RBP1.2□□□□□ -2.22
HIF1A-212ENST00000557538 LINC00312Q9Y6C7 94 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 V9GYH0 126 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 SLX4Q8IY92 1834 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 ATAD5Q96QE3 1844 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 AGRNO00468 2067 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 ZNF638Q14966 1978 aaKnown RBP1.2□□□□□ -2.22
HIF1A-212ENST00000557538 EDC4Q6P2E9 1401 aaKnown RBP1.2□□□□□ -2.22
HIF1A-212ENST00000557538 FAM208AQ9UK61 1670 aaKnown RBP1.2□□□□□ -2.22
HIF1A-212ENST00000557538 ITGB4P16144 1822 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 RGPD3A6NKT7 1758 aaPredicted RBP1.2□□□□□ -2.22
HIF1A-212ENST00000557538 RGPD4Q7Z3J3 1758 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 ARHGAP5Q13017 1502 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 DHRS12A0PJE2 317 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 TSPAN11A1L157 253 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 KRTAP9-6A8MVA2 160 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 SULT2B1O00204 365 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 SLC17A3O00476 420 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 PMP2P02689 132 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 OR5AC1P0C628 307 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 PET100P0DJ07 73 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms