RNA–Protein interactions for RNA: ENST00000557302.1

SHMT2-228, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-228ENST00000557302 CNTFRP26992 372 aa10.77□□□□□ -0.69
SHMT2-228ENST00000557302 HLA-DMAP28067 261 aa10.77□□□□□ -0.69
SHMT2-228ENST00000557302 RFX2P48378 723 aa10.77□□□□□ -0.69
SHMT2-228ENST00000557302 CBX3Q13185 183 aa10.77□□□□□ -0.69
SHMT2-228ENST00000557302 RNASE12Q5GAN4 147 aaKnown RBP10.77□□□□□ -0.69
SHMT2-228ENST00000557302 OVCH2Q7RTZ1 564 aa10.77□□□□□ -0.69
SHMT2-228ENST00000557302 SLC35E3Q7Z769 313 aa10.77□□□□□ -0.69
SHMT2-228ENST00000557302 LYSMD2Q8IV50 215 aa10.77□□□□□ -0.69
SHMT2-228ENST00000557302 NPBQ8NG41 125 aa10.77□□□□□ -0.69
SHMT2-228ENST00000557302 GIMAP1Q8WWP7 306 aa10.77□□□□□ -0.69
SHMT2-228ENST00000557302 ABHD1Q96SE0 405 aa10.77□□□□□ -0.69
SHMT2-228ENST00000557302 RNF5Q99942 180 aa10.77□□□□□ -0.69
SHMT2-228ENST00000557302 SLC35D1Q9NTN3 355 aa10.77□□□□□ -0.69
SHMT2-228ENST00000557302 KIAA1456Q9P272 454 aa10.77□□□□□ -0.69
SHMT2-228ENST00000557302 RABL2AQ9UBK7 228 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-228ENST00000557302 RABL2BQ9UNT1 228 aa10.77□□□□□ -0.69
SHMT2-228ENST00000557302 RBMX2Q9Y388 322 aaKnown RBP10.77□□□□□ -0.69
SHMT2-228ENST00000557302 NDUFA3O95167 84 aa10.76□□□□□ -0.69
SHMT2-228ENST00000557302 IGHG2P01859 326 aa10.76□□□□□ -0.69
SHMT2-228ENST00000557302 RRASP10301 218 aa10.76□□□□□ -0.69
SHMT2-228ENST00000557302 DUTP33316 252 aaKnown RBP10.76□□□□□ -0.69
SHMT2-228ENST00000557302 HRH1P35367 487 aa10.76□□□□□ -0.69
SHMT2-228ENST00000557302 FXYD4P59646 89 aa10.76□□□□□ -0.69
SHMT2-228ENST00000557302 HERV-K104P61576 105 aa10.76□□□□□ -0.69
SHMT2-228ENST00000557302 RPS16P62249 146 aaKnown RBP10.76□□□□□ -0.69
SHMT2-228ENST00000557302 MRPS10P82664 201 aaKnown RBP10.76□□□□□ -0.69
SHMT2-228ENST00000557302 DYRK1AQ13627 763 aa10.76□□□□□ -0.69
SHMT2-228ENST00000557302 IL18Q14116 193 aa10.76□□□□□ -0.69
SHMT2-228ENST00000557302 RTL8BQ17RB0 113 aa10.76□□□□□ -0.69
SHMT2-228ENST00000557302 C5orf64Q2M2E5 130 aa10.76□□□□□ -0.69
SHMT2-228ENST00000557302 DMRTA1Q5VZB9 504 aa10.76□□□□□ -0.69
SHMT2-228ENST00000557302 CENPVQ7Z7K6 275 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-228ENST00000557302 FOXRED2Q8IWF2 684 aa10.76□□□□□ -0.69
SHMT2-228ENST00000557302 OR52I2Q8NH67 350 aa10.76□□□□□ -0.69
SHMT2-228ENST00000557302 SECTM1Q8WVN6 248 aa10.76□□□□□ -0.69
SHMT2-228ENST00000557302 FCAMRQ8WWV6 532 aa10.76□□□□□ -0.69
SHMT2-228ENST00000557302 FLYWCH2Q96CP2 140 aaKnown RBP10.76□□□□□ -0.69
SHMT2-228ENST00000557302 TSNAXQ99598 290 aaKnown RBP10.76□□□□□ -0.69
SHMT2-228ENST00000557302 MMP27Q9H306 513 aa10.76□□□□□ -0.69
SHMT2-228ENST00000557302 NDUFA13Q9P0J0 144 aa10.76□□□□□ -0.69
SHMT2-228ENST00000557302 GABARAPH6UMI1 98 aa10.75□□□□□ -0.69
SHMT2-228ENST00000557302 RRHO14718 337 aa10.75□□□□□ -0.69
SHMT2-228ENST00000557302 KCNAB3O43448 404 aa10.75□□□□□ -0.69
SHMT2-228ENST00000557302 FBXO24O75426 580 aa10.75□□□□□ -0.69
SHMT2-228ENST00000557302 IGLV2-14P01704 120 aa10.75□□□□□ -0.69
SHMT2-228ENST00000557302 HLA-DRB1P01911 266 aa10.75□□□□□ -0.69
SHMT2-228ENST00000557302 IGKV1-16P04430 117 aa10.75□□□□□ -0.69
SHMT2-228ENST00000557302 PLGLAQ15195 96 aa10.75□□□□□ -0.69
SHMT2-228ENST00000557302 MSMO1Q15800 293 aa10.75□□□□□ -0.69
SHMT2-228ENST00000557302 ACTBL2Q562R1 376 aa10.75□□□□□ -0.69
SHMT2-228ENST00000557302 PYHIN1Q6K0P9 492 aa10.75□□□□□ -0.69
SHMT2-228ENST00000557302 DHRS11Q6UWP2 260 aa10.75□□□□□ -0.69
SHMT2-228ENST00000557302 TMEM17Q86X19 198 aa10.75□□□□□ -0.69
SHMT2-228ENST00000557302 C11orf44Q8N8P7 122 aa10.75□□□□□ -0.69
SHMT2-228ENST00000557302 BVESQ8NE79 360 aa10.75□□□□□ -0.69
SHMT2-228ENST00000557302 SGMS2Q8NHU3 365 aa10.75□□□□□ -0.69
SHMT2-228ENST00000557302 WIPF2Q8TF74 440 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-228ENST00000557302 HSD17B10Q99714 261 aaKnown RBP10.75□□□□□ -0.69
SHMT2-228ENST00000557302 ZNF2Q9BSG1 426 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-228ENST00000557302 SLC5A7Q9GZV3 580 aa10.75□□□□□ -0.69
SHMT2-228ENST00000557302 CCL28Q9NRJ3 127 aa10.75□□□□□ -0.69
SHMT2-228ENST00000557302 KLK11Q9UBX7 282 aa10.75□□□□□ -0.69
SHMT2-228ENST00000557302 MTFP1Q9UDX5 166 aa10.75□□□□□ -0.69
SHMT2-228ENST00000557302 ZNF107Q9UII5 783 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-228ENST00000557302 A3GALT2U3KPV4 340 aa10.75□□□□□ -0.69
SHMT2-228ENST00000557302 LINC00473A8K010 186 aa10.74□□□□□ -0.69
SHMT2-228ENST00000557302 AP4M1O00189 453 aa10.74□□□□□ -0.69
SHMT2-228ENST00000557302 SPDEFO95238 335 aa10.74□□□□□ -0.69
SHMT2-228ENST00000557302 TNFSF8P32971 234 aa10.74□□□□□ -0.69
SHMT2-228ENST00000557302 TSPAN5P62079 268 aa10.74□□□□□ -0.69
SHMT2-228ENST00000557302 DGCR2P98153 550 aa10.74□□□□□ -0.69
SHMT2-228ENST00000557302 ZNF660Q6AZW8 331 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-228ENST00000557302 LIN54Q6MZP7 749 aa10.74□□□□□ -0.69
SHMT2-228ENST00000557302 KCTD9Q7L273 389 aa10.74□□□□□ -0.69
SHMT2-228ENST00000557302 OR5AU1Q8NGC0 362 aa10.74□□□□□ -0.69
SHMT2-228ENST00000557302 OR6F1Q8NGZ6 308 aa10.74□□□□□ -0.69
SHMT2-228ENST00000557302 DDB2Q92466 427 aa10.74□□□□□ -0.69
SHMT2-228ENST00000557302 MOB3AQ96BX8 217 aa10.74□□□□□ -0.69
SHMT2-228ENST00000557302 DGCR14Q96DF8 476 aaKnown RBP10.74□□□□□ -0.69
SHMT2-228ENST00000557302 HARBI1Q96MB7 349 aa10.74□□□□□ -0.69
SHMT2-228ENST00000557302 NOL4LQ96MY1 436 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-228ENST00000557302 HSPB9Q9BQS6 159 aa10.74□□□□□ -0.69
SHMT2-228ENST00000557302 FBXL15Q9H469 300 aa10.74□□□□□ -0.69
SHMT2-228ENST00000557302 TAS2R8Q9NYW2 309 aa10.74□□□□□ -0.69
SHMT2-228ENST00000557302 PRELID3BQ9Y3B1 194 aa10.74□□□□□ -0.69
SHMT2-228ENST00000557302 DPPA5A6NC42 116 aa10.73□□□□□ -0.69
SHMT2-228ENST00000557302 FABP12A6NFH5 140 aa10.73□□□□□ -0.69
SHMT2-228ENST00000557302 LINC01548A6NM66 108 aa10.73□□□□□ -0.69
SHMT2-228ENST00000557302 M0QZ24 198 aa10.73□□□□□ -0.69
SHMT2-228ENST00000557302 CTDSPLO15194 276 aa10.73□□□□□ -0.69
SHMT2-228ENST00000557302 FCGR3BO75015 233 aa10.73□□□□□ -0.69
SHMT2-228ENST00000557302 CRYZL1O95825 349 aa10.73□□□□□ -0.69
SHMT2-228ENST00000557302 CD28P10747 220 aa10.73□□□□□ -0.69
SHMT2-228ENST00000557302 S100A5P33763 92 aa10.73□□□□□ -0.69
SHMT2-228ENST00000557302 LGALS7P47929 136 aa10.73□□□□□ -0.69
SHMT2-228ENST00000557302 SSBP1Q04837 148 aaKnown RBP10.73□□□□□ -0.69
SHMT2-228ENST00000557302 PSG5Q15238 335 aa10.73□□□□□ -0.69
SHMT2-228ENST00000557302 TMEM177Q53S58 311 aa10.73□□□□□ -0.69
SHMT2-228ENST00000557302 VAX1Q5SQQ9 334 aa10.73□□□□□ -0.69
SHMT2-228ENST00000557302 ZNF66Q6ZN08 573 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms