RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 TRBV5-7A0A0A0MS05 114 aa9.31□□□□□ -0.92
PSEN1-221ENST00000557293 A0A0B4J203 849 aa9.31□□□□□ -0.92
PSEN1-221ENST00000557293 GYG2O15488 501 aa9.31□□□□□ -0.92
PSEN1-221ENST00000557293 CRTAPO75718 401 aaPredicted RBP9.31□□□□□ -0.92
PSEN1-221ENST00000557293 OR2C1O95371 312 aa9.31□□□□□ -0.92
PSEN1-221ENST00000557293 LALBAP00709 142 aa9.31□□□□□ -0.92
PSEN1-221ENST00000557293 HLA-AP01891 365 aaKnown RBP9.31□□□□□ -0.92
PSEN1-221ENST00000557293 PRH1P02810 166 aa9.31□□□□□ -0.92
PSEN1-221ENST00000557293 CBLN1P23435 193 aa9.31□□□□□ -0.92
PSEN1-221ENST00000557293 BMI1P35226 326 aa9.31□□□□□ -0.92
PSEN1-221ENST00000557293 RHOGP84095 191 aa9.31□□□□□ -0.92
PSEN1-221ENST00000557293 CCDC58Q4VC31 144 aa9.31□□□□□ -0.92
PSEN1-221ENST00000557293 SLC16A13Q7RTY0 426 aa9.31□□□□□ -0.92
PSEN1-221ENST00000557293 PDPNQ86YL7 162 aa9.31□□□□□ -0.92
PSEN1-221ENST00000557293 SVOPQ8N4V2 548 aa9.31□□□□□ -0.92
PSEN1-221ENST00000557293 RHOXF1Q8NHV9 184 aa9.31□□□□□ -0.92
PSEN1-221ENST00000557293 CACNG8Q8WXS5 425 aa9.31□□□□□ -0.92
PSEN1-221ENST00000557293 FAM46BQ96A09 425 aa9.31□□□□□ -0.92
PSEN1-221ENST00000557293 PTX4Q96A99 478 aa9.31□□□□□ -0.92
PSEN1-221ENST00000557293 MYCBPQ99417 103 aaPredicted RBP9.31□□□□□ -0.92
PSEN1-221ENST00000557293 MLXQ9UH92 298 aa9.31□□□□□ -0.92
PSEN1-221ENST00000557293 DYNC1H1Q14204 4646 aaKnown RBP9.31□□□□□ -0.92
PSEN1-221ENST00000557293 SAC3D1A6NKF1 404 aa9.3□□□□□ -0.92
PSEN1-221ENST00000557293 PPP5D1E7EU14 171 aa9.3□□□□□ -0.92
PSEN1-221ENST00000557293 LGALS9O00182 355 aa9.3□□□□□ -0.92
PSEN1-221ENST00000557293 ALPLP05186 524 aa9.3□□□□□ -0.92
PSEN1-221ENST00000557293 OR9G9P0C7N8 305 aa9.3□□□□□ -0.92
PSEN1-221ENST00000557293 MED14OSP0DP75 135 aa9.3□□□□□ -0.92
PSEN1-221ENST00000557293 CAPGP40121 348 aa9.3□□□□□ -0.92
PSEN1-221ENST00000557293 CEACAM6P40199 344 aa9.3□□□□□ -0.92
PSEN1-221ENST00000557293 ATP5G2Q06055 141 aa9.3□□□□□ -0.92
PSEN1-221ENST00000557293 EXOSC2Q13868 293 aaKnown RBP9.3□□□□□ -0.92
PSEN1-221ENST00000557293 ZIK1Q3SY52 487 aaPredicted RBP9.3□□□□□ -0.92
PSEN1-221ENST00000557293 TM4SF20Q53R12 229 aa9.3□□□□□ -0.92
PSEN1-221ENST00000557293 OR2G6Q5TZ20 316 aa9.3□□□□□ -0.92
PSEN1-221ENST00000557293 AWAT2Q6E213 333 aa9.3□□□□□ -0.92
PSEN1-221ENST00000557293 C6orf201Q7Z4U5 140 aa9.3□□□□□ -0.92
PSEN1-221ENST00000557293 CDH26Q8IXH8 852 aa9.3□□□□□ -0.92
PSEN1-221ENST00000557293 JAGN1Q8N5M9 183 aa9.3□□□□□ -0.92
PSEN1-221ENST00000557293 RNF183Q96D59 192 aa9.3□□□□□ -0.92
PSEN1-221ENST00000557293 ABRACLQ9P1F3 81 aa9.3□□□□□ -0.92
PSEN1-221ENST00000557293 A0A1W2PPK0 400 aa9.29□□□□□ -0.92
PSEN1-221ENST00000557293 FAM223BA6NKX1 122 aa9.29□□□□□ -0.92
PSEN1-221ENST00000557293 ETV1P50549 477 aa9.29□□□□□ -0.92
PSEN1-221ENST00000557293 DEFB135Q30KP9 77 aa9.29□□□□□ -0.92
PSEN1-221ENST00000557293 DNAL1Q4LDG9 190 aa9.29□□□□□ -0.92
PSEN1-221ENST00000557293 FAM223AQ8IWN6 122 aa9.29□□□□□ -0.92
PSEN1-221ENST00000557293 OR52B4Q8NGK2 314 aa9.29□□□□□ -0.92
PSEN1-221ENST00000557293 CENPNQ96H22 339 aaPredicted RBP9.29□□□□□ -0.92
PSEN1-221ENST00000557293 FGF20Q9NP95 211 aaPredicted RBP9.29□□□□□ -0.92
PSEN1-221ENST00000557293 SLC35D1Q9NTN3 355 aa9.29□□□□□ -0.92
PSEN1-221ENST00000557293 FAT2Q9NYQ8 4349 aa9.29□□□□□ -0.92
PSEN1-221ENST00000557293 IGKV1-6A0A0C4DH72 117 aa9.28□□□□□ -0.92
PSEN1-221ENST00000557293 TMEM213A2RRL7 107 aa9.28□□□□□ -0.92
PSEN1-221ENST00000557293 SNTNA6NMZ2 147 aa9.28□□□□□ -0.92
PSEN1-221ENST00000557293 SCAF4O95104 1147 aaKnown RBP9.28□□□□□ -0.92
PSEN1-221ENST00000557293 HTR2CP28335 458 aa9.28□□□□□ -0.92
PSEN1-221ENST00000557293 Q499Y3 187 aa9.28□□□□□ -0.92
PSEN1-221ENST00000557293 TMEM177Q53S58 311 aa9.28□□□□□ -0.92
PSEN1-221ENST00000557293 ZNF57Q68EA5 555 aaPredicted RBP9.28□□□□□ -0.92
PSEN1-221ENST00000557293 OR10K2Q6IF99 312 aa9.28□□□□□ -0.92
PSEN1-221ENST00000557293 GPHB5Q86YW7 130 aa9.28□□□□□ -0.92
PSEN1-221ENST00000557293 UXS1Q8NBZ7 420 aa9.28□□□□□ -0.92
PSEN1-221ENST00000557293 CCDC197Q8NCU1 140 aa9.28□□□□□ -0.92
PSEN1-221ENST00000557293 SMIM19Q96E16 107 aa9.28□□□□□ -0.92
PSEN1-221ENST00000557293 C5orf30Q96GV9 206 aa9.28□□□□□ -0.92
PSEN1-221ENST00000557293 BABAM2Q9NXR7 383 aa9.28□□□□□ -0.92
PSEN1-221ENST00000557293 TRBV6-6A0A0A6YYG2 114 aa9.27□□□□□ -0.93
PSEN1-221ENST00000557293 GGCTO75223 188 aaKnown RBP9.27□□□□□ -0.93
PSEN1-221ENST00000557293 APOA2P02652 100 aa9.27□□□□□ -0.93
PSEN1-221ENST00000557293 SCTP09683 121 aa9.27□□□□□ -0.93
PSEN1-221ENST00000557293 PRSS8Q16651 343 aa9.27□□□□□ -0.93
PSEN1-221ENST00000557293 ZNF485Q8NCK3 441 aa9.27□□□□□ -0.93
PSEN1-221ENST00000557293 APH1BQ8WW43 257 aa9.27□□□□□ -0.93
PSEN1-221ENST00000557293 EDARADDQ8WWZ3 215 aa9.27□□□□□ -0.93
PSEN1-221ENST00000557293 PGLYRP3Q96LB9 341 aa9.27□□□□□ -0.93
PSEN1-221ENST00000557293 NEDD4LQ96PU5 975 aa9.27□□□□□ -0.93
PSEN1-221ENST00000557293 HDHD3Q9BSH5 251 aaPredicted RBP9.27□□□□□ -0.93
PSEN1-221ENST00000557293 DNAH2Q9P225 4427 aa9.26□□□□□ -0.93
PSEN1-221ENST00000557293 M0R1X1 148 aa9.26□□□□□ -0.93
PSEN1-221ENST00000557293 UBE2CO00762 179 aa9.26□□□□□ -0.93
PSEN1-221ENST00000557293 C8orf88P0DMB2 117 aa9.26□□□□□ -0.93
PSEN1-221ENST00000557293 ZBTB25P24278 435 aa9.26□□□□□ -0.93
PSEN1-221ENST00000557293 RPS27AP62979 156 aaKnown RBP9.26□□□□□ -0.93
PSEN1-221ENST00000557293 TTC9CQ8N5M4 171 aa9.26□□□□□ -0.93
PSEN1-221ENST00000557293 TEX45Q8NA69 505 aa9.26□□□□□ -0.93
PSEN1-221ENST00000557293 NECAP1Q8NC96 275 aa9.26□□□□□ -0.93
PSEN1-221ENST00000557293 SRSF12Q8WXF0 261 aaKnown RBP9.26□□□□□ -0.93
PSEN1-221ENST00000557293 PHB2Q99623 299 aa9.26□□□□□ -0.93
PSEN1-221ENST00000557293 NICN1Q9BSH3 213 aa9.26□□□□□ -0.93
PSEN1-221ENST00000557293 ZNF221Q9UK13 617 aa9.26□□□□□ -0.93
PSEN1-221ENST00000557293 APLNQ9ULZ1 77 aa9.26□□□□□ -0.93
PSEN1-221ENST00000557293 DNAH11Q96DT5 4516 aa9.26□□□□□ -0.93
PSEN1-221ENST00000557293 A0A0A6YYD4 124 aa9.25□□□□□ -0.93
PSEN1-221ENST00000557293 A8MWP6 167 aa9.25□□□□□ -0.93
PSEN1-221ENST00000557293 EI24O14681 340 aa9.25□□□□□ -0.93
PSEN1-221ENST00000557293 TUSC2O75896 110 aa9.25□□□□□ -0.93
PSEN1-221ENST00000557293 OR2J3O76001 311 aa9.25□□□□□ -0.93
PSEN1-221ENST00000557293 FCGR1AP12314 374 aa9.25□□□□□ -0.93
PSEN1-221ENST00000557293 APOC4P55056 127 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms