RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 OPN1MW3P0DN78 364 aa8.43□□□□□ -1.06
LINC00239-201ENST00000556973 FCGR2CP31995 323 aa8.43□□□□□ -1.06
LINC00239-201ENST00000556973 DUTP33316 252 aaKnown RBP8.43□□□□□ -1.06
LINC00239-201ENST00000556973 LGALS7P47929 136 aa8.43□□□□□ -1.06
LINC00239-201ENST00000556973 RPS16P62249 146 aaKnown RBP8.43□□□□□ -1.06
LINC00239-201ENST00000556973 CBX3Q13185 183 aa8.43□□□□□ -1.06
LINC00239-201ENST00000556973 CDK10Q15131 360 aa8.43□□□□□ -1.06
LINC00239-201ENST00000556973 DHRS11Q6UWP2 260 aa8.43□□□□□ -1.06
LINC00239-201ENST00000556973 LYSMD2Q8IV50 215 aa8.43□□□□□ -1.06
LINC00239-201ENST00000556973 COMMD1Q8N668 190 aa8.43□□□□□ -1.06
LINC00239-201ENST00000556973 DYNC2LI1Q8TCX1 351 aa8.43□□□□□ -1.06
LINC00239-201ENST00000556973 GPX8Q8TED1 209 aa8.43□□□□□ -1.06
LINC00239-201ENST00000556973 C15orf40Q8WUR7 153 aa8.43□□□□□ -1.06
LINC00239-201ENST00000556973 SNAPC3Q92966 411 aa8.43□□□□□ -1.06
LINC00239-201ENST00000556973 TSNAXQ99598 290 aaKnown RBP8.43□□□□□ -1.06
LINC00239-201ENST00000556973 HSPB9Q9BQS6 159 aa8.43□□□□□ -1.06
LINC00239-201ENST00000556973 MMP27Q9H306 513 aa8.43□□□□□ -1.06
LINC00239-201ENST00000556973 SCPEP1Q9HB40 452 aa8.43□□□□□ -1.06
LINC00239-201ENST00000556973 LINC00527Q9UJ94 153 aa8.43□□□□□ -1.06
LINC00239-201ENST00000556973 ZNF580Q9UK33 172 aa8.43□□□□□ -1.06
LINC00239-201ENST00000556973 ADAM30Q9UKF2 790 aa8.43□□□□□ -1.06
LINC00239-201ENST00000556973 ANAPC10Q9UM13 185 aa8.43□□□□□ -1.06
LINC00239-201ENST00000556973 IGKV1D-13A0A0B4J2D9 117 aa8.42□□□□□ -1.06
LINC00239-201ENST00000556973 TCRBV4S1A1TA0A5B7 111 aa8.42□□□□□ -1.06
LINC00239-201ENST00000556973 H3BMQ9 156 aa8.42□□□□□ -1.06
LINC00239-201ENST00000556973 RGS5O15539 181 aa8.42□□□□□ -1.06
LINC00239-201ENST00000556973 SPDEFO95238 335 aa8.42□□□□□ -1.06
LINC00239-201ENST00000556973 PPYP01298 95 aa8.42□□□□□ -1.06
LINC00239-201ENST00000556973 IGLV2-14P01704 120 aa8.42□□□□□ -1.06
LINC00239-201ENST00000556973 FCER2P06734 321 aa8.42□□□□□ -1.06
LINC00239-201ENST00000556973 IGKV1-13P0DP09 117 aa8.42□□□□□ -1.06
LINC00239-201ENST00000556973 TAS2R46P59540 309 aa8.42□□□□□ -1.06
LINC00239-201ENST00000556973 DYRK1AQ13627 763 aa8.42□□□□□ -1.06
LINC00239-201ENST00000556973 PLGLAQ15195 96 aa8.42□□□□□ -1.06
LINC00239-201ENST00000556973 PSG5Q15238 335 aa8.42□□□□□ -1.06
LINC00239-201ENST00000556973 MSMO1Q15800 293 aa8.42□□□□□ -1.06
LINC00239-201ENST00000556973 RTL8BQ17RB0 113 aa8.42□□□□□ -1.06
LINC00239-201ENST00000556973 NSUN5P1Q3KNT7 163 aa8.42□□□□□ -1.06
LINC00239-201ENST00000556973 TMEM177Q53S58 311 aa8.42□□□□□ -1.06
LINC00239-201ENST00000556973 TCTEX1D4Q5JR98 221 aa8.42□□□□□ -1.06
LINC00239-201ENST00000556973 ZNF660Q6AZW8 331 aaPredicted RBP8.42□□□□□ -1.06
LINC00239-201ENST00000556973 HIST2H2BDQ6DRA6 164 aa8.42□□□□□ -1.06
LINC00239-201ENST00000556973 TEX38Q6PEX7 206 aa8.42□□□□□ -1.06
LINC00239-201ENST00000556973 OVCH2Q7RTZ1 564 aa8.42□□□□□ -1.06
LINC00239-201ENST00000556973 ZNF329Q86UD4 541 aa8.42□□□□□ -1.06
LINC00239-201ENST00000556973 SNX29P2Q8IUI4 249 aa8.42□□□□□ -1.06
LINC00239-201ENST00000556973 ZBTB34Q8NCN2 500 aa8.42□□□□□ -1.06
LINC00239-201ENST00000556973 BVESQ8NE79 360 aa8.42□□□□□ -1.06
LINC00239-201ENST00000556973 DDB2Q92466 427 aa8.42□□□□□ -1.06
LINC00239-201ENST00000556973 ISOC1Q96CN7 298 aa8.42□□□□□ -1.06
LINC00239-201ENST00000556973 C5orf30Q96GV9 206 aa8.42□□□□□ -1.06
LINC00239-201ENST00000556973 OR51J1Q9H342 316 aa8.42□□□□□ -1.06
LINC00239-201ENST00000556973 ZFP57Q9NU63 452 aa8.42□□□□□ -1.06
LINC00239-201ENST00000556973 CCDC59Q9P031 241 aaKnown RBP8.42□□□□□ -1.06
LINC00239-201ENST00000556973 METTL1Q9UBP6 276 aaKnown RBP8.42□□□□□ -1.06
LINC00239-201ENST00000556973 EXTL2Q9UBQ6 330 aa8.42□□□□□ -1.06
LINC00239-201ENST00000556973 RBMX2Q9Y388 322 aaKnown RBP8.42□□□□□ -1.06
LINC00239-201ENST00000556973 TSSC4Q9Y5U2 329 aaPredicted RBP8.42□□□□□ -1.06
LINC00239-201ENST00000556973 CEPT1Q9Y6K0 416 aa8.42□□□□□ -1.06
LINC00239-201ENST00000556973 IGHV7-81A0A0B4J1V7 117 aa8.41□□□□□ -1.06
LINC00239-201ENST00000556973 LINC00473A8K010 186 aa8.41□□□□□ -1.06
LINC00239-201ENST00000556973 ADARB2-AS1A8MUL3 147 aa8.41□□□□□ -1.06
LINC00239-201ENST00000556973 CTDSP2O14595 271 aa8.41□□□□□ -1.06
LINC00239-201ENST00000556973 TSPAN15O95858 294 aa8.41□□□□□ -1.06
LINC00239-201ENST00000556973 PMP2P02689 132 aa8.41□□□□□ -1.06
LINC00239-201ENST00000556973 VDAC1P21796 283 aa8.41□□□□□ -1.06
LINC00239-201ENST00000556973 AADACP22760 399 aa8.41□□□□□ -1.06
LINC00239-201ENST00000556973 CX3CL1P78423 397 aa8.41□□□□□ -1.06
LINC00239-201ENST00000556973 C10orf99Q6UWK7 81 aa8.41□□□□□ -1.06
LINC00239-201ENST00000556973 ZNF562Q6V9R5 426 aa8.41□□□□□ -1.06
LINC00239-201ENST00000556973 OR4F17Q8NGA8 305 aa8.41□□□□□ -1.06
LINC00239-201ENST00000556973 OR5H2Q8NGV7 314 aa8.41□□□□□ -1.06
LINC00239-201ENST00000556973 OR6F1Q8NGZ6 308 aa8.41□□□□□ -1.06
LINC00239-201ENST00000556973 OSR1Q8TAX0 266 aaPredicted RBP8.41□□□□□ -1.06
LINC00239-201ENST00000556973 FAM110DQ8TAY7 271 aaPredicted RBP8.41□□□□□ -1.06
LINC00239-201ENST00000556973 OR4F4Q96R69 305 aa8.41□□□□□ -1.06
LINC00239-201ENST00000556973 HSD17B10Q99714 261 aaKnown RBP8.41□□□□□ -1.06
LINC00239-201ENST00000556973 MIXL1Q9H2W2 232 aa8.41□□□□□ -1.06
LINC00239-201ENST00000556973 FBXL15Q9H469 300 aa8.41□□□□□ -1.06
LINC00239-201ENST00000556973 EHFQ9NZC4 300 aa8.41□□□□□ -1.06
LINC00239-201ENST00000556973 PRELID3BQ9Y3B1 194 aa8.41□□□□□ -1.06
LINC00239-201ENST00000556973 FCN1O00602 326 aa8.4□□□□□ -1.06
LINC00239-201ENST00000556973 SHOXO15266 292 aa8.4□□□□□ -1.06
LINC00239-201ENST00000556973 RCVRNP35243 200 aa8.4□□□□□ -1.06
LINC00239-201ENST00000556973 RFX2P48378 723 aa8.4□□□□□ -1.06
LINC00239-201ENST00000556973 EIF4EBP1Q13541 118 aaPredicted RBP8.4□□□□□ -1.06
LINC00239-201ENST00000556973 ZNF66Q6ZN08 573 aa8.4□□□□□ -1.06
LINC00239-201ENST00000556973 KCTD9Q7L273 389 aa8.4□□□□□ -1.06
LINC00239-201ENST00000556973 PPP1R27Q86WC6 154 aa8.4□□□□□ -1.06
LINC00239-201ENST00000556973 MFSD4AQ8N468 514 aa8.4□□□□□ -1.06
LINC00239-201ENST00000556973 SECTM1Q8WVN6 248 aa8.4□□□□□ -1.06
LINC00239-201ENST00000556973 BORCS5Q969J3 196 aa8.4□□□□□ -1.06
LINC00239-201ENST00000556973 R3HDM4Q96D70 268 aa8.4□□□□□ -1.06
LINC00239-201ENST00000556973 HARBI1Q96MB7 349 aa8.4□□□□□ -1.06
LINC00239-201ENST00000556973 ABHD1Q96SE0 405 aa8.4□□□□□ -1.06
LINC00239-201ENST00000556973 ZNF2Q9BSG1 426 aaPredicted RBP8.4□□□□□ -1.06
LINC00239-201ENST00000556973 SLC5A7Q9GZV3 580 aa8.4□□□□□ -1.06
LINC00239-201ENST00000556973 CCL28Q9NRJ3 127 aa8.4□□□□□ -1.06
LINC00239-201ENST00000556973 RABL2AQ9UBK7 228 aaPredicted RBP8.4□□□□□ -1.06
LINC00239-201ENST00000556973 RABL2BQ9UNT1 228 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms