RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 ZNF221Q9UK13 617 aa13.96□□□□□ -0.17
VIPAS39-209ENST00000556909 MGAT4AQ9UM21 535 aa13.96□□□□□ -0.17
VIPAS39-209ENST00000556909 A0A0G2JLM5 398 aa13.95□□□□□ -0.18
VIPAS39-209ENST00000556909 FOXI3A8MTJ6 420 aaPredicted RBP13.95□□□□□ -0.18
VIPAS39-209ENST00000556909 CD37P11049 281 aa13.95□□□□□ -0.18
VIPAS39-209ENST00000556909 SRMP19623 302 aa13.95□□□□□ -0.18
VIPAS39-209ENST00000556909 SYNJ2BPP57105 145 aa13.95□□□□□ -0.18
VIPAS39-209ENST00000556909 DEFA5Q01523 94 aa13.95□□□□□ -0.18
VIPAS39-209ENST00000556909 HAGHQ16775 308 aa13.95□□□□□ -0.18
VIPAS39-209ENST00000556909 HSD17B12Q53GQ0 312 aa13.95□□□□□ -0.18
VIPAS39-209ENST00000556909 BPIFB6Q8NFQ5 453 aa13.95□□□□□ -0.18
VIPAS39-209ENST00000556909 THAP7Q9BT49 309 aaPredicted RBP13.95□□□□□ -0.18
VIPAS39-209ENST00000556909 IGKV1-6A0A0C4DH72 117 aa13.94□□□□□ -0.18
VIPAS39-209ENST00000556909 H0Y980 276 aa13.94□□□□□ -0.18
VIPAS39-209ENST00000556909 M0R1X1 148 aa13.94□□□□□ -0.18
VIPAS39-209ENST00000556909 CNIH1O95406 144 aa13.94□□□□□ -0.18
VIPAS39-209ENST00000556909 IGLV2-23P01705 113 aa13.94□□□□□ -0.18
VIPAS39-209ENST00000556909 PJVKQ0ZLH3 352 aa13.94□□□□□ -0.18
VIPAS39-209ENST00000556909 P2RY14Q15391 338 aa13.94□□□□□ -0.18
VIPAS39-209ENST00000556909 CEACAM19Q7Z692 300 aa13.94□□□□□ -0.18
VIPAS39-209ENST00000556909 FAM89BQ8N5H3 189 aa13.94□□□□□ -0.18
VIPAS39-209ENST00000556909 URM1Q9BTM9 101 aaKnown RBP13.94□□□□□ -0.18
VIPAS39-209ENST00000556909 MND1Q9BWT6 205 aa13.94□□□□□ -0.18
VIPAS39-209ENST00000556909 SLC35D1Q9NTN3 355 aa13.94□□□□□ -0.18
VIPAS39-209ENST00000556909 RDH8Q9NYR8 311 aa13.94□□□□□ -0.18
VIPAS39-209ENST00000556909 ADAM30Q9UKF2 790 aa13.94□□□□□ -0.18
VIPAS39-209ENST00000556909 HSF4Q9ULV5 492 aa13.94□□□□□ -0.18
VIPAS39-209ENST00000556909 PLECQ15149 4684 aaKnown RBP13.94□□□□□ -0.18
VIPAS39-209ENST00000556909 BRI3O95415 125 aa13.93□□□□□ -0.18
VIPAS39-209ENST00000556909 TRBV12-3P01733 135 aa13.93□□□□□ -0.18
VIPAS39-209ENST00000556909 CRYGBP07316 175 aa13.93□□□□□ -0.18
VIPAS39-209ENST00000556909 UCHL1P09936 223 aa13.93□□□□□ -0.18
VIPAS39-209ENST00000556909 ARHGAP5-AS1Q96IT6 56 aa13.93□□□□□ -0.18
VIPAS39-209ENST00000556909 GFI1Q99684 422 aa13.93□□□□□ -0.18
VIPAS39-209ENST00000556909 TINAGL1Q9GZM7 467 aaPredicted RBP13.93□□□□□ -0.18
VIPAS39-209ENST00000556909 LSM2Q9Y333 95 aaKnown RBP13.93□□□□□ -0.18
VIPAS39-209ENST00000556909 CDK1P06493 297 aa13.92□□□□□ -0.18
VIPAS39-209ENST00000556909 CSN3P07498 182 aa13.92□□□□□ -0.18
VIPAS39-209ENST00000556909 AADACP22760 399 aa13.92□□□□□ -0.18
VIPAS39-209ENST00000556909 TMEM50BP56557 158 aa13.92□□□□□ -0.18
VIPAS39-209ENST00000556909 DYRK1AQ13627 763 aa13.92□□□□□ -0.18
VIPAS39-209ENST00000556909 RNLSQ5VYX0 342 aa13.92□□□□□ -0.18
VIPAS39-209ENST00000556909 ZNF343Q6P1L6 599 aa13.92□□□□□ -0.18
VIPAS39-209ENST00000556909 GTSCR1Q86UQ5 136 aa13.92□□□□□ -0.18
VIPAS39-209ENST00000556909 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.92□□□□□ -0.18
VIPAS39-209ENST00000556909 PEF1Q9UBV8 284 aaKnown RBP13.92□□□□□ -0.18
VIPAS39-209ENST00000556909 ALMS1Q8TCU4 4167 aa13.92□□□□□ -0.18
VIPAS39-209ENST00000556909 IFNA6P05013 189 aa13.91□□□□□ -0.18
VIPAS39-209ENST00000556909 LCN12Q6JVE5 192 aa13.91□□□□□ -0.18
VIPAS39-209ENST00000556909 BVESQ8NE79 360 aa13.91□□□□□ -0.18
VIPAS39-209ENST00000556909 HARBI1Q96MB7 349 aa13.91□□□□□ -0.18
VIPAS39-209ENST00000556909 TMEM68Q96MH6 324 aa13.91□□□□□ -0.18
VIPAS39-209ENST00000556909 CMSS1Q9BQ75 279 aaKnown RBP13.91□□□□□ -0.18
VIPAS39-209ENST00000556909 PECRQ9BY49 303 aa13.91□□□□□ -0.18
VIPAS39-209ENST00000556909 TUBA4BQ9H853 241 aa13.91□□□□□ -0.18
VIPAS39-209ENST00000556909 PLGRKTQ9HBL7 147 aa13.91□□□□□ -0.18
VIPAS39-209ENST00000556909 COA4Q9NYJ1 87 aa13.91□□□□□ -0.18
VIPAS39-209ENST00000556909 SIGLEC8Q9NYZ4 499 aa13.91□□□□□ -0.18
VIPAS39-209ENST00000556909 IZUMO1RA6ND01 250 aa13.9□□□□□ -0.18
VIPAS39-209ENST00000556909 TRDCB7Z8K6 153 aa13.9□□□□□ -0.18
VIPAS39-209ENST00000556909 SLC17A2O00624 439 aa13.9□□□□□ -0.18
VIPAS39-209ENST00000556909 LGALS7P47929 136 aa13.9□□□□□ -0.18
VIPAS39-209ENST00000556909 SPHARQ15513 63 aa13.9□□□□□ -0.18
VIPAS39-209ENST00000556909 RPEL1Q2QD12 228 aa13.9□□□□□ -0.18
VIPAS39-209ENST00000556909 PLAC9Q5JTB6 97 aa13.9□□□□□ -0.18
VIPAS39-209ENST00000556909 Q8N402 240 aa13.9□□□□□ -0.18
VIPAS39-209ENST00000556909 C5orf30Q96GV9 206 aa13.9□□□□□ -0.18
VIPAS39-209ENST00000556909 OR2D2Q9H210 308 aa13.9□□□□□ -0.18
VIPAS39-209ENST00000556909 RETNQ9HD89 108 aa13.9□□□□□ -0.18
VIPAS39-209ENST00000556909 SDHAF2Q9NX18 166 aa13.9□□□□□ -0.18
VIPAS39-209ENST00000556909 RBMXL2O75526 392 aaKnown RBP13.89□□□□□ -0.19
VIPAS39-209ENST00000556909 OR2A4O95047 310 aa13.89□□□□□ -0.19
VIPAS39-209ENST00000556909 CD3GP09693 182 aa13.89□□□□□ -0.19
VIPAS39-209ENST00000556909 APELAP0DMC3 54 aa13.89□□□□□ -0.19
VIPAS39-209ENST00000556909 SERPINB10P48595 397 aa13.89□□□□□ -0.19
VIPAS39-209ENST00000556909 RAB11BQ15907 218 aa13.89□□□□□ -0.19
VIPAS39-209ENST00000556909 MRGPRG-AS1Q2M3A8 158 aa13.89□□□□□ -0.19
VIPAS39-209ENST00000556909 OR4A4PQ8NGN8 299 aa13.89□□□□□ -0.19
VIPAS39-209ENST00000556909 USMG5Q96IX5 58 aa13.89□□□□□ -0.19
VIPAS39-209ENST00000556909 SRRM4A7MD48 611 aaKnown RBP13.88□□□□□ -0.19
VIPAS39-209ENST00000556909 SHOXO15266 292 aa13.88□□□□□ -0.19
VIPAS39-209ENST00000556909 FABP7O15540 132 aa13.88□□□□□ -0.19
VIPAS39-209ENST00000556909 CLDN12P56749 244 aa13.88□□□□□ -0.19
VIPAS39-209ENST00000556909 RCN1Q15293 331 aa13.88□□□□□ -0.19
VIPAS39-209ENST00000556909 MED22Q15528 200 aa13.88□□□□□ -0.19
VIPAS39-209ENST00000556909 TATDN3Q17R31 274 aa13.88□□□□□ -0.19
VIPAS39-209ENST00000556909 TMEM177Q53S58 311 aa13.88□□□□□ -0.19
VIPAS39-209ENST00000556909 LIPKQ5VXJ0 399 aa13.88□□□□□ -0.19
VIPAS39-209ENST00000556909 TMEM91Q6ZNR0 172 aa13.88□□□□□ -0.19
VIPAS39-209ENST00000556909 ADAD2Q8NCV1 583 aaKnown RBP13.88□□□□□ -0.19
VIPAS39-209ENST00000556909 UFD1Q92890 307 aa13.88□□□□□ -0.19
VIPAS39-209ENST00000556909 TMEM203Q969S6 136 aa13.88□□□□□ -0.19
VIPAS39-209ENST00000556909 PHB2Q99623 299 aa13.88□□□□□ -0.19
VIPAS39-209ENST00000556909 CABLES2Q9BTV7 478 aa13.88□□□□□ -0.19
VIPAS39-209ENST00000556909 AK6Q9Y3D8 172 aaKnown RBP13.88□□□□□ -0.19
VIPAS39-209ENST00000556909 MECP2P51608 486 aaKnown RBP13.87□□□□□ -0.19
VIPAS39-209ENST00000556909 CBX3Q13185 183 aa13.87□□□□□ -0.19
VIPAS39-209ENST00000556909 RTL8BQ17RB0 113 aa13.87□□□□□ -0.19
VIPAS39-209ENST00000556909 IGSF11Q5DX21 431 aa13.87□□□□□ -0.19
VIPAS39-209ENST00000556909 OGFRL1Q5TC84 451 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 355.6 ms