RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 ETV6P41212 452 aa11.17□□□□□ -0.62
SLIRP-207ENST00000556831 NCS1P62166 190 aa11.17□□□□□ -0.62
SLIRP-207ENST00000556831 ZNF260Q3ZCT1 412 aa11.17□□□□□ -0.62
SLIRP-207ENST00000556831 TMEM69Q5SWH9 247 aa11.17□□□□□ -0.62
SLIRP-207ENST00000556831 Q8N9W7 124 aa11.17□□□□□ -0.62
SLIRP-207ENST00000556831 OR8U1Q8NH10 309 aa11.17□□□□□ -0.62
SLIRP-207ENST00000556831 AP3S1Q92572 193 aa11.17□□□□□ -0.62
SLIRP-207ENST00000556831 R3HDM4Q96D70 268 aa11.17□□□□□ -0.62
SLIRP-207ENST00000556831 SLC25A38Q96DW6 304 aa11.17□□□□□ -0.62
SLIRP-207ENST00000556831 AGMATQ9BSE5 352 aa11.17□□□□□ -0.62
SLIRP-207ENST00000556831 IFT46Q9NQC8 304 aa11.17□□□□□ -0.62
SLIRP-207ENST00000556831 ZNF107Q9UII5 783 aaPredicted RBP11.17□□□□□ -0.62
SLIRP-207ENST00000556831 PAIP2BQ9ULR5 123 aaKnown RBP11.17□□□□□ -0.62
SLIRP-207ENST00000556831 TSSC4Q9Y5U2 329 aaPredicted RBP11.17□□□□□ -0.62
SLIRP-207ENST00000556831 UPK1BO75841 260 aa11.16□□□□□ -0.62
SLIRP-207ENST00000556831 CBX5P45973 191 aa11.16□□□□□ -0.62
SLIRP-207ENST00000556831 CNIH2Q6PI25 160 aa11.16□□□□□ -0.62
SLIRP-207ENST00000556831 GLDNQ6ZMI3 551 aaPredicted RBP11.16□□□□□ -0.62
SLIRP-207ENST00000556831 COMMD1Q8N668 190 aa11.16□□□□□ -0.62
SLIRP-207ENST00000556831 ACOT12Q8WYK0 555 aa11.16□□□□□ -0.62
SLIRP-207ENST00000556831 ANXA10Q9UJ72 324 aa11.16□□□□□ -0.62
SLIRP-207ENST00000556831 ELF5Q9UKW6 265 aaPredicted RBP11.16□□□□□ -0.62
SLIRP-207ENST00000556831 H0YJW9 148 aa11.15□□□□□ -0.62
SLIRP-207ENST00000556831 CT45A6P0DMU7 189 aa11.15□□□□□ -0.62
SLIRP-207ENST00000556831 CT45A5P0DMU8 189 aa11.15□□□□□ -0.62
SLIRP-207ENST00000556831 CT45A7P0DMV0 189 aa11.15□□□□□ -0.62
SLIRP-207ENST00000556831 OR5H8P0DN80 308 aa11.15□□□□□ -0.62
SLIRP-207ENST00000556831 RORCP51449 518 aa11.15□□□□□ -0.62
SLIRP-207ENST00000556831 LUMP51884 338 aaPredicted RBP11.15□□□□□ -0.62
SLIRP-207ENST00000556831 F2RL1P55085 397 aa11.15□□□□□ -0.62
SLIRP-207ENST00000556831 TAGLNQ01995 201 aaKnown RBP11.15□□□□□ -0.62
SLIRP-207ENST00000556831 RTL8BQ17RB0 113 aa11.15□□□□□ -0.62
SLIRP-207ENST00000556831 MZT2AQ6P582 158 aa11.15□□□□□ -0.62
SLIRP-207ENST00000556831 PDPNQ86YL7 162 aa11.15□□□□□ -0.62
SLIRP-207ENST00000556831 STPG2Q8N412 459 aa11.15□□□□□ -0.62
SLIRP-207ENST00000556831 FAM71E2Q8N5Q1 922 aa11.15□□□□□ -0.62
SLIRP-207ENST00000556831 BEST4Q8NFU0 473 aa11.15□□□□□ -0.62
SLIRP-207ENST00000556831 ABHD5Q8WTS1 349 aa11.15□□□□□ -0.62
SLIRP-207ENST00000556831 NOL4LQ96MY1 436 aaPredicted RBP11.15□□□□□ -0.62
SLIRP-207ENST00000556831 TSNAXQ99598 290 aaKnown RBP11.15□□□□□ -0.62
SLIRP-207ENST00000556831 C6orf62Q9GZU0 229 aaPredicted RBP11.15□□□□□ -0.62
SLIRP-207ENST00000556831 TOLLIPQ9H0E2 274 aa11.15□□□□□ -0.62
SLIRP-207ENST00000556831 COMMD3Q9UBI1 195 aa11.15□□□□□ -0.62
SLIRP-207ENST00000556831 LINC00527Q9UJ94 153 aa11.15□□□□□ -0.62
SLIRP-207ENST00000556831 XRCC3O43542 346 aa11.14□□□□□ -0.63
SLIRP-207ENST00000556831 SLC22A5O76082 557 aa11.14□□□□□ -0.63
SLIRP-207ENST00000556831 PF4P02776 101 aa11.14□□□□□ -0.63
SLIRP-207ENST00000556831 THBS3P49746 956 aa11.14□□□□□ -0.63
SLIRP-207ENST00000556831 RPS16P62249 146 aaKnown RBP11.14□□□□□ -0.63
SLIRP-207ENST00000556831 C5orf64Q2M2E5 130 aa11.14□□□□□ -0.63
SLIRP-207ENST00000556831 LIN54Q6MZP7 749 aa11.14□□□□□ -0.63
SLIRP-207ENST00000556831 ZNF329Q86UD4 541 aa11.14□□□□□ -0.63
SLIRP-207ENST00000556831 H1FOOQ8IZA3 346 aaPredicted RBP11.14□□□□□ -0.63
SLIRP-207ENST00000556831 OR5AN1Q8NGI8 311 aa11.14□□□□□ -0.63
SLIRP-207ENST00000556831 WIPF2Q8TF74 440 aaPredicted RBP11.14□□□□□ -0.63
SLIRP-207ENST00000556831 FLYWCH2Q96CP2 140 aaKnown RBP11.14□□□□□ -0.63
SLIRP-207ENST00000556831 ADTRPQ96IZ2 230 aa11.14□□□□□ -0.63
SLIRP-207ENST00000556831 RNF5Q99942 180 aa11.14□□□□□ -0.63
SLIRP-207ENST00000556831 AUNIPQ9H7T9 357 aa11.14□□□□□ -0.63
SLIRP-207ENST00000556831 PARP11Q9NR21 331 aa11.14□□□□□ -0.63
SLIRP-207ENST00000556831 PLSCR3Q9NRY6 295 aa11.14□□□□□ -0.63
SLIRP-207ENST00000556831 SLC35D1Q9NTN3 355 aa11.14□□□□□ -0.63
SLIRP-207ENST00000556831 NUDT19A8MXV4 375 aa11.13□□□□□ -0.63
SLIRP-207ENST00000556831 RRHO14718 337 aa11.13□□□□□ -0.63
SLIRP-207ENST00000556831 SSX5O60225 188 aa11.13□□□□□ -0.63
SLIRP-207ENST00000556831 HLA-DRB1P01911 266 aa11.13□□□□□ -0.63
SLIRP-207ENST00000556831 RRASP10301 218 aa11.13□□□□□ -0.63
SLIRP-207ENST00000556831 CD83Q01151 205 aa11.13□□□□□ -0.63
SLIRP-207ENST00000556831 CXorf66Q5JRM2 361 aaPredicted RBP11.13□□□□□ -0.63
SLIRP-207ENST00000556831 TEX38Q6PEX7 206 aa11.13□□□□□ -0.63
SLIRP-207ENST00000556831 ZBTB8BQ8NAP8 495 aaPredicted RBP11.13□□□□□ -0.63
SLIRP-207ENST00000556831 NPBQ8NG41 125 aa11.13□□□□□ -0.63
SLIRP-207ENST00000556831 NECAP2Q9NVZ3 263 aa11.13□□□□□ -0.63
SLIRP-207ENST00000556831 SDHAF2Q9NX18 166 aa11.13□□□□□ -0.63
SLIRP-207ENST00000556831 OR2W1Q9Y3N9 320 aa11.13□□□□□ -0.63
SLIRP-207ENST00000556831 IGKV1D-8A0A087WSZ0 117 aa11.12□□□□□ -0.63
SLIRP-207ENST00000556831 SPDEFO95238 335 aa11.12□□□□□ -0.63
SLIRP-207ENST00000556831 NFYAP23511 347 aaPredicted RBP11.12□□□□□ -0.63
SLIRP-207ENST00000556831 CNTFRP26992 372 aa11.12□□□□□ -0.63
SLIRP-207ENST00000556831 TAS2R20P59543 309 aa11.12□□□□□ -0.63
SLIRP-207ENST00000556831 C10orf99Q6UWK7 81 aa11.12□□□□□ -0.63
SLIRP-207ENST00000556831 HOGA1Q86XE5 327 aa11.12□□□□□ -0.63
SLIRP-207ENST00000556831 ZNF645Q8N7E2 425 aa11.12□□□□□ -0.63
SLIRP-207ENST00000556831 HSPB9Q9BQS6 159 aa11.12□□□□□ -0.63
SLIRP-207ENST00000556831 FBXL15Q9H469 300 aa11.12□□□□□ -0.63
SLIRP-207ENST00000556831 METTL1Q9UBP6 276 aaKnown RBP11.12□□□□□ -0.63
SLIRP-207ENST00000556831 GAB2Q9UQC2 676 aa11.12□□□□□ -0.63
SLIRP-207ENST00000556831 MRPS7Q9Y2R9 242 aaKnown RBP11.12□□□□□ -0.63
SLIRP-207ENST00000556831 MEIS3P1A6NDR6 274 aa11.11□□□□□ -0.63
SLIRP-207ENST00000556831 FAM25AB3EWG3 89 aa11.11□□□□□ -0.63
SLIRP-207ENST00000556831 FAM25CB3EWG5 89 aa11.11□□□□□ -0.63
SLIRP-207ENST00000556831 FAM25GB3EWG6 89 aa11.11□□□□□ -0.63
SLIRP-207ENST00000556831 SHOXO15266 292 aa11.11□□□□□ -0.63
SLIRP-207ENST00000556831 TUSC2O75896 110 aa11.11□□□□□ -0.63
SLIRP-207ENST00000556831 NDUFA3O95167 84 aa11.11□□□□□ -0.63
SLIRP-207ENST00000556831 PRSS3P35030 304 aa11.11□□□□□ -0.63
SLIRP-207ENST00000556831 TMEM65Q6PI78 240 aa11.11□□□□□ -0.63
SLIRP-207ENST00000556831 GVQW1Q8N7I0 195 aa11.11□□□□□ -0.63
SLIRP-207ENST00000556831 ZNF383Q8NA42 475 aa11.11□□□□□ -0.63
SLIRP-207ENST00000556831 HARBI1Q96MB7 349 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms