RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 UBE2E1P51965 193 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 GFERP55789 205 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 ATP5J2P56134 94 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 OR10A3P58181 314 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 MTPNP58546 118 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 C1QTNF8P60827 252 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 RANP62826 216 aaKnown RBP2.79□□□□□ -1.96
PRPF39-210ENST00000556718 HOXC5Q00444 222 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 MADCAM1Q13477 382 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 TPBGQ13641 420 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 SCGB2B2Q4G0G5 96 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 ZNF678Q5SXM1 525 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 FBXW9Q5XUX1 488 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 CA13Q8N1Q1 262 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 LINC00471Q8N535 108 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 C15orf56Q8N910 161 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 Q8N9L7 120 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 OR4D6Q8NGJ1 314 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 OR9A2Q8NGT5 310 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 STAG3L4Q8TBR4 150 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 RXFP2Q8WXD0 754 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 SRSF12Q8WXF0 261 aaKnown RBP2.79□□□□□ -1.96
PRPF39-210ENST00000556718 CDS1Q92903 461 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 FAM104AQ969W3 186 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 UBE2E2Q96LR5 201 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 AIF1LQ9BQI0 150 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 PBDC1Q9BVG4 233 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 SFXN3Q9BWM7 321 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 DPY30Q9C005 99 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 DERL2Q9GZP9 239 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 FXYD6Q9H0Q3 95 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 OR52D1Q9H346 318 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 POPDC3Q9HBV1 291 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 NRBP2Q9NSY0 501 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 UQCC1Q9NVA1 299 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 TAS2R8Q9NYW2 309 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 SIGLEC9Q9Y336 463 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 MMACHCQ9Y4U1 282 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 KLF12Q9Y4X4 402 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 MTCH2Q9Y6C9 303 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 TJP1Q07157 1748 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 TOGARAM1Q9Y4F4 1720 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 RIMBP3CA6NJZ7 1639 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 RIMBP3BA6NNM3 1639 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 LRP5O75197 1615 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 DUOX1Q9NRD9 1551 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 SLIT2O94813 1529 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 TET2Q6N021 2002 aaPredicted RBP2.78□□□□□ -1.96
PRPF39-210ENST00000556718 TECPR2O15040 1411 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 TRAV8-7A0A075B6U6 113 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 A0A0A6YYD5 115 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 IGHV2OR16-5A0A0B4J2B6 119 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 A0A0U1RQV1 116 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 TMEM223A0PJW6 202 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 ARRDC5A6NEK1 342 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 A8MWP6 167 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 LINC01619G3V211 115 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 GPR31O00270 319 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 MANBAO00462 879 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 UBFD1O14562 309 aaKnown RBP2.78□□□□□ -1.96
PRPF39-210ENST00000556718 BPY2O14599 106 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 SLC16A4O15374 487 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 EEF1E1O43324 174 aaKnown RBP2.78□□□□□ -1.96
PRPF39-210ENST00000556718 STK16O75716 305 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 UBL3O95164 117 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 SIX6O95475 246 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 C8GP07360 202 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 IL3P08700 152 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 MMP7P09237 267 aaPredicted RBP2.78□□□□□ -1.96
PRPF39-210ENST00000556718 ZNF35P13682 527 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 TPT1P13693 172 aaKnown RBP2.78□□□□□ -1.96
PRPF39-210ENST00000556718 MUC1P15941 1255 aaPredicted RBP2.78□□□□□ -1.96
PRPF39-210ENST00000556718 CXCL2P19875 107 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 CXCL3P19876 107 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 GNRHRP30968 328 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 NDUFA6P56556 154 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 ARF6P62330 175 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 ZNF345Q14585 488 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 GUK1Q16774 197 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 COL5A1-AS1Q5SY13 56 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 FAM27D1Q5T7N8 215 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 MFSD14CQ5VZR4 134 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 ZNF660Q6AZW8 331 aaPredicted RBP2.78□□□□□ -1.96
PRPF39-210ENST00000556718 HBMQ6B0K9 141 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 OPN5Q6U736 354 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 Q6ZSR6 202 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 Q6ZVH6 145 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 KCNRGQ8N5I3 272 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 OR8J2Q8NGG1 315 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 OR10D4PQ8NGN7 298 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 OR9I1Q8NGQ6 314 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 SYNPRQ8TBG9 265 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 DOK4Q8TEW6 326 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 C16orf78Q8WTQ4 265 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 EEF1AKMT1Q8WVE0 214 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 TMEM159Q96B96 161 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 SMIM12Q96EX1 92 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 ZNF488Q96MN9 340 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 OR52E6Q96RD3 313 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 PHB2Q99623 299 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms