RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 SULT4A1Q9BR01 284 aa10.42□□□□□ -0.74
ACTN1-219ENST00000556432 FAAP24Q9BTP7 215 aa10.42□□□□□ -0.74
ACTN1-219ENST00000556432 C11orf54Q9H0W9 315 aaPredicted RBP10.42□□□□□ -0.74
ACTN1-219ENST00000556432 AKIP1Q9NQ31 210 aa10.42□□□□□ -0.74
ACTN1-219ENST00000556432 SLC35D1Q9NTN3 355 aa10.42□□□□□ -0.74
ACTN1-219ENST00000556432 OR1A1Q9P1Q5 309 aa10.42□□□□□ -0.74
ACTN1-219ENST00000556432 A0A1W2PPK0 400 aa10.41□□□□□ -0.74
ACTN1-219ENST00000556432 MSGN1A6NI15 193 aa10.41□□□□□ -0.74
ACTN1-219ENST00000556432 PPP5D1E7EU14 171 aa10.41□□□□□ -0.74
ACTN1-219ENST00000556432 M0R1X1 148 aa10.41□□□□□ -0.74
ACTN1-219ENST00000556432 CIB2O75838 187 aa10.41□□□□□ -0.74
ACTN1-219ENST00000556432 SCAF4O95104 1147 aaKnown RBP10.41□□□□□ -0.74
ACTN1-219ENST00000556432 HLA-AP01891 365 aaKnown RBP10.41□□□□□ -0.74
ACTN1-219ENST00000556432 OR9G9P0C7N8 305 aa10.41□□□□□ -0.74
ACTN1-219ENST00000556432 CAPGP40121 348 aa10.41□□□□□ -0.74
ACTN1-219ENST00000556432 APOC4P55056 127 aa10.41□□□□□ -0.74
ACTN1-219ENST00000556432 CBX3Q13185 183 aa10.41□□□□□ -0.74
ACTN1-219ENST00000556432 ANKRD55Q3KP44 614 aa10.41□□□□□ -0.74
ACTN1-219ENST00000556432 ZNF57Q68EA5 555 aaPredicted RBP10.41□□□□□ -0.74
ACTN1-219ENST00000556432 TMEM61Q8N0U2 210 aa10.41□□□□□ -0.74
ACTN1-219ENST00000556432 SVOPQ8N4V2 548 aa10.41□□□□□ -0.74
ACTN1-219ENST00000556432 ADAD2Q8NCV1 583 aaKnown RBP10.41□□□□□ -0.74
ACTN1-219ENST00000556432 CACNG8Q8WXS5 425 aa10.41□□□□□ -0.74
ACTN1-219ENST00000556432 SMIM19Q96E16 107 aa10.41□□□□□ -0.74
ACTN1-219ENST00000556432 CENPNQ96H22 339 aaPredicted RBP10.41□□□□□ -0.74
ACTN1-219ENST00000556432 HARBI1Q96MB7 349 aa10.41□□□□□ -0.74
ACTN1-219ENST00000556432 Q96MT0 163 aa10.41□□□□□ -0.74
ACTN1-219ENST00000556432 ZNF230Q9UIE0 474 aaPredicted RBP10.41□□□□□ -0.74
ACTN1-219ENST00000556432 LIMS3P0CW19 117 aa10.4□□□□□ -0.74
ACTN1-219ENST00000556432 LIMS4P0CW20 117 aa10.4□□□□□ -0.74
ACTN1-219ENST00000556432 ZBTB25P24278 435 aa10.4□□□□□ -0.74
ACTN1-219ENST00000556432 TNXAQ16473 311 aa10.4□□□□□ -0.74
ACTN1-219ENST00000556432 Q499Y3 187 aa10.4□□□□□ -0.74
ACTN1-219ENST00000556432 TM4SF20Q53R12 229 aa10.4□□□□□ -0.74
ACTN1-219ENST00000556432 OR2G6Q5TZ20 316 aa10.4□□□□□ -0.74
ACTN1-219ENST00000556432 TMPRSS11AQ6ZMR5 421 aa10.4□□□□□ -0.74
ACTN1-219ENST00000556432 MOB1BQ7L9L4 216 aa10.4□□□□□ -0.74
ACTN1-219ENST00000556432 C6orf201Q7Z4U5 140 aa10.4□□□□□ -0.74
ACTN1-219ENST00000556432 WFDC3Q8IUB2 231 aa10.4□□□□□ -0.74
ACTN1-219ENST00000556432 KCNG3Q8TAE7 436 aa10.4□□□□□ -0.74
ACTN1-219ENST00000556432 AGMATQ9BSE5 352 aa10.4□□□□□ -0.74
ACTN1-219ENST00000556432 TP53TG1Q9Y2A0 90 aa10.4□□□□□ -0.74
ACTN1-219ENST00000556432 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.39□□□□□ -0.75
ACTN1-219ENST00000556432 TRBV5-5A0A0J9YX44 114 aa10.39□□□□□ -0.75
ACTN1-219ENST00000556432 ZNF320A2RRD8 509 aa10.39□□□□□ -0.75
ACTN1-219ENST00000556432 ITGB1BP1O14713 200 aa10.39□□□□□ -0.75
ACTN1-219ENST00000556432 SHOXO15266 292 aa10.39□□□□□ -0.75
ACTN1-219ENST00000556432 IGLV2-23P01705 113 aa10.39□□□□□ -0.75
ACTN1-219ENST00000556432 Q6ZWC4 215 aa10.39□□□□□ -0.75
ACTN1-219ENST00000556432 PYDC1Q8WXC3 89 aa10.39□□□□□ -0.75
ACTN1-219ENST00000556432 EXOSC1Q9Y3B2 195 aaKnown RBP10.39□□□□□ -0.75
ACTN1-219ENST00000556432 RPL36Q9Y3U8 105 aaKnown RBP10.39□□□□□ -0.75
ACTN1-219ENST00000556432 EI24O14681 340 aa10.38□□□□□ -0.75
ACTN1-219ENST00000556432 GGCTO75223 188 aaKnown RBP10.38□□□□□ -0.75
ACTN1-219ENST00000556432 PROP1O75360 226 aa10.38□□□□□ -0.75
ACTN1-219ENST00000556432 OR2C1O95371 312 aa10.38□□□□□ -0.75
ACTN1-219ENST00000556432 ALPLP05186 524 aa10.38□□□□□ -0.75
ACTN1-219ENST00000556432 ATF4P18848 351 aaPredicted RBP10.38□□□□□ -0.75
ACTN1-219ENST00000556432 CBLN1P23435 193 aa10.38□□□□□ -0.75
ACTN1-219ENST00000556432 MAP2K4P45985 399 aa10.38□□□□□ -0.75
ACTN1-219ENST00000556432 ETV1P50549 477 aa10.38□□□□□ -0.75
ACTN1-219ENST00000556432 PRR20EP86478 221 aa10.38□□□□□ -0.75
ACTN1-219ENST00000556432 PRR20CP86479 221 aa10.38□□□□□ -0.75
ACTN1-219ENST00000556432 PRR20DP86480 221 aa10.38□□□□□ -0.75
ACTN1-219ENST00000556432 PRR20BP86481 221 aa10.38□□□□□ -0.75
ACTN1-219ENST00000556432 PRR20AP86496 221 aa10.38□□□□□ -0.75
ACTN1-219ENST00000556432 C15orf32Q32M92 178 aa10.38□□□□□ -0.75
ACTN1-219ENST00000556432 ACOT12Q8WYK0 555 aa10.38□□□□□ -0.75
ACTN1-219ENST00000556432 FBXL17Q9UF56 701 aa10.38□□□□□ -0.75
ACTN1-219ENST00000556432 ANKRD65E5RJM6 399 aa10.37□□□□□ -0.75
ACTN1-219ENST00000556432 OGG1O15527 345 aa10.37□□□□□ -0.75
ACTN1-219ENST00000556432 OR2J3O76001 311 aa10.37□□□□□ -0.75
ACTN1-219ENST00000556432 NAPSAO96009 420 aa10.37□□□□□ -0.75
ACTN1-219ENST00000556432 CRYGBP07316 175 aa10.37□□□□□ -0.75
ACTN1-219ENST00000556432 GABRB1P18505 474 aa10.37□□□□□ -0.75
ACTN1-219ENST00000556432 HLA-DRB3P79483 266 aa10.37□□□□□ -0.75
ACTN1-219ENST00000556432 ZNF45Q02386 682 aa10.37□□□□□ -0.75
ACTN1-219ENST00000556432 VMA21Q3ZAQ7 101 aa10.37□□□□□ -0.75
ACTN1-219ENST00000556432 YIF1BQ5BJH7 314 aa10.37□□□□□ -0.75
ACTN1-219ENST00000556432 FAM209BQ5JX69 171 aa10.37□□□□□ -0.75
ACTN1-219ENST00000556432 OR10K2Q6IF99 312 aa10.37□□□□□ -0.75
ACTN1-219ENST00000556432 BTNL8Q6UX41 500 aa10.37□□□□□ -0.75
ACTN1-219ENST00000556432 CDH26Q8IXH8 852 aa10.37□□□□□ -0.75
ACTN1-219ENST00000556432 STPG3Q8N7X2 389 aa10.37□□□□□ -0.75
ACTN1-219ENST00000556432 ZFP41Q8N8Y5 198 aa10.37□□□□□ -0.75
ACTN1-219ENST00000556432 NECAP1Q8NC96 275 aa10.37□□□□□ -0.75
ACTN1-219ENST00000556432 OR1L6Q8NGR2 347 aa10.37□□□□□ -0.75
ACTN1-219ENST00000556432 SRSF12Q8WXF0 261 aaKnown RBP10.37□□□□□ -0.75
ACTN1-219ENST00000556432 MLXQ9UH92 298 aa10.37□□□□□ -0.75
ACTN1-219ENST00000556432 TRBV5-7A0A0A0MS05 114 aa10.36□□□□□ -0.75
ACTN1-219ENST00000556432 PNMA8CA0A1B0GUJ8 204 aa10.36□□□□□ -0.75
ACTN1-219ENST00000556432 LGALS9O00182 355 aa10.36□□□□□ -0.75
ACTN1-219ENST00000556432 UBE2CO00762 179 aa10.36□□□□□ -0.75
ACTN1-219ENST00000556432 ACTL6BO94805 426 aa10.36□□□□□ -0.75
ACTN1-219ENST00000556432 RTL8BQ17RB0 113 aa10.36□□□□□ -0.75
ACTN1-219ENST00000556432 ZNF880Q6PDB4 577 aa10.36□□□□□ -0.75
ACTN1-219ENST00000556432 IDO2Q6ZQW0 420 aa10.36□□□□□ -0.75
ACTN1-219ENST00000556432 RBPMS2Q6ZRY4 209 aaKnown RBP10.36□□□□□ -0.75
ACTN1-219ENST00000556432 SLC38A6Q8IZM9 456 aa10.36□□□□□ -0.75
ACTN1-219ENST00000556432 NKAIN3Q8N8D7 197 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 172.6 ms