RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 WBP4O75554 376 aaKnown RBP8.12□□□□□ -1.11
SYNE2-221ENST00000556342 IGKV1-16P04430 117 aa8.12□□□□□ -1.11
SYNE2-221ENST00000556342 CSN3P07498 182 aa8.12□□□□□ -1.11
SYNE2-221ENST00000556342 CPEP16870 476 aa8.12□□□□□ -1.11
SYNE2-221ENST00000556342 MYL12AP19105 171 aa8.12□□□□□ -1.11
SYNE2-221ENST00000556342 CAPGP40121 348 aa8.12□□□□□ -1.11
SYNE2-221ENST00000556342 NKAIN3Q8N8D7 197 aa8.12□□□□□ -1.11
SYNE2-221ENST00000556342 DERL3Q96Q80 235 aa8.12□□□□□ -1.11
SYNE2-221ENST00000556342 SLC29A1Q99808 456 aa8.12□□□□□ -1.11
SYNE2-221ENST00000556342 UQCC2Q9BRT2 126 aa8.12□□□□□ -1.11
SYNE2-221ENST00000556342 AGMATQ9BSE5 352 aa8.12□□□□□ -1.11
SYNE2-221ENST00000556342 FAAP24Q9BTP7 215 aa8.12□□□□□ -1.11
SYNE2-221ENST00000556342 PLEKHA3Q9HB20 300 aa8.12□□□□□ -1.11
SYNE2-221ENST00000556342 CLEC2DQ9UHP7 191 aa8.12□□□□□ -1.11
SYNE2-221ENST00000556342 DIMT1Q9UNQ2 313 aaKnown RBP8.12□□□□□ -1.11
SYNE2-221ENST00000556342 SLC25A17O43808 307 aa8.11□□□□□ -1.11
SYNE2-221ENST00000556342 PROP1O75360 226 aa8.11□□□□□ -1.11
SYNE2-221ENST00000556342 ATP5HO75947 161 aa8.11□□□□□ -1.11
SYNE2-221ENST00000556342 BRI3O95415 125 aa8.11□□□□□ -1.11
SYNE2-221ENST00000556342 NAPSAO96009 420 aa8.11□□□□□ -1.11
SYNE2-221ENST00000556342 TRBV12-3P01733 135 aa8.11□□□□□ -1.11
SYNE2-221ENST00000556342 AADACP22760 399 aa8.11□□□□□ -1.11
SYNE2-221ENST00000556342 CD81P60033 236 aa8.11□□□□□ -1.11
SYNE2-221ENST00000556342 RPS16P62249 146 aaKnown RBP8.11□□□□□ -1.11
SYNE2-221ENST00000556342 SSBP2P81877 361 aaPredicted RBP8.11□□□□□ -1.11
SYNE2-221ENST00000556342 DEFA5Q01523 94 aa8.11□□□□□ -1.11
SYNE2-221ENST00000556342 TATDN3Q17R31 274 aa8.11□□□□□ -1.11
SYNE2-221ENST00000556342 ZNF343Q6P1L6 599 aa8.11□□□□□ -1.11
SYNE2-221ENST00000556342 ZFP1Q6P2D0 407 aa8.11□□□□□ -1.11
SYNE2-221ENST00000556342 ZNF880Q6PDB4 577 aa8.11□□□□□ -1.11
SYNE2-221ENST00000556342 MOB1BQ7L9L4 216 aa8.11□□□□□ -1.11
SYNE2-221ENST00000556342 C6orf201Q7Z4U5 140 aa8.11□□□□□ -1.11
SYNE2-221ENST00000556342 ZNF383Q8NA42 475 aa8.11□□□□□ -1.11
SYNE2-221ENST00000556342 DRAXINQ8NBI3 349 aaPredicted RBP8.11□□□□□ -1.11
SYNE2-221ENST00000556342 ZNF485Q8NCK3 441 aa8.11□□□□□ -1.11
SYNE2-221ENST00000556342 C9orf16Q9BUW7 83 aa8.11□□□□□ -1.11
SYNE2-221ENST00000556342 C11orf54Q9H0W9 315 aaPredicted RBP8.11□□□□□ -1.11
SYNE2-221ENST00000556342 CHMP1AQ9HD42 196 aaPredicted RBP8.11□□□□□ -1.11
SYNE2-221ENST00000556342 GHRLQ9UBU3 117 aa8.11□□□□□ -1.11
SYNE2-221ENST00000556342 PEF1Q9UBV8 284 aaKnown RBP8.11□□□□□ -1.11
SYNE2-221ENST00000556342 EXOSC1Q9Y3B2 195 aaKnown RBP8.11□□□□□ -1.11
SYNE2-221ENST00000556342 HERC2O95714 4834 aa8.11□□□□□ -1.11
SYNE2-221ENST00000556342 PNMA8CA0A1B0GUJ8 204 aa8.1□□□□□ -1.11
SYNE2-221ENST00000556342 IRGMA1A4Y4 181 aa8.1□□□□□ -1.11
SYNE2-221ENST00000556342 TPPPO94811 219 aa8.1□□□□□ -1.11
SYNE2-221ENST00000556342 OR2A4O95047 310 aa8.1□□□□□ -1.11
SYNE2-221ENST00000556342 CNIH1O95406 144 aa8.1□□□□□ -1.11
SYNE2-221ENST00000556342 MECP2P51608 486 aaKnown RBP8.1□□□□□ -1.11
SYNE2-221ENST00000556342 LINC00310P59036 64 aa8.1□□□□□ -1.11
SYNE2-221ENST00000556342 LINC00205P59089 165 aa8.1□□□□□ -1.11
SYNE2-221ENST00000556342 RPS27AP62979 156 aaKnown RBP8.1□□□□□ -1.11
SYNE2-221ENST00000556342 DYRK1AQ13627 763 aa8.1□□□□□ -1.11
SYNE2-221ENST00000556342 RPEL1Q2QD12 228 aa8.1□□□□□ -1.11
SYNE2-221ENST00000556342 RNLSQ5VYX0 342 aa8.1□□□□□ -1.11
SYNE2-221ENST00000556342 OR10K2Q6IF99 312 aa8.1□□□□□ -1.11
SYNE2-221ENST00000556342 PDPNQ86YL7 162 aa8.1□□□□□ -1.11
SYNE2-221ENST00000556342 BVESQ8NE79 360 aa8.1□□□□□ -1.11
SYNE2-221ENST00000556342 OR2K2Q8NGT1 345 aa8.1□□□□□ -1.11
SYNE2-221ENST00000556342 SETD6Q8TBK2 473 aa8.1□□□□□ -1.11
SYNE2-221ENST00000556342 LINC00476Q8WZB0 136 aa8.1□□□□□ -1.11
SYNE2-221ENST00000556342 TMEM68Q96MH6 324 aa8.1□□□□□ -1.11
SYNE2-221ENST00000556342 NEURL2Q9BR09 285 aa8.1□□□□□ -1.11
SYNE2-221ENST00000556342 TINAGL1Q9GZM7 467 aaPredicted RBP8.1□□□□□ -1.11
SYNE2-221ENST00000556342 OR1A1Q9P1Q5 309 aa8.1□□□□□ -1.11
SYNE2-221ENST00000556342 FRAS1Q86XX4 4008 aa8.1□□□□□ -1.11
SYNE2-221ENST00000556342 RBMY1BA6NDE4 496 aaKnown RBP8.09□□□□□ -1.11
SYNE2-221ENST00000556342 RBMY1EA6NEQ0 496 aaKnown RBP8.09□□□□□ -1.11
SYNE2-221ENST00000556342 APOA2P02652 100 aa8.09□□□□□ -1.11
SYNE2-221ENST00000556342 RBMY1DP0C7P1 496 aaKnown RBP8.09□□□□□ -1.11
SYNE2-221ENST00000556342 UBBP0CG47 229 aa8.09□□□□□ -1.11
SYNE2-221ENST00000556342 ZBTB25P24278 435 aa8.09□□□□□ -1.11
SYNE2-221ENST00000556342 HTR2CP28335 458 aa8.09□□□□□ -1.11
SYNE2-221ENST00000556342 CEACAM6P40199 344 aa8.09□□□□□ -1.11
SYNE2-221ENST00000556342 TAS2R43P59537 309 aa8.09□□□□□ -1.11
SYNE2-221ENST00000556342 PJVKQ0ZLH3 352 aa8.09□□□□□ -1.11
SYNE2-221ENST00000556342 MED21Q13503 144 aa8.09□□□□□ -1.11
SYNE2-221ENST00000556342 LAX1Q8IWV1 398 aa8.09□□□□□ -1.11
SYNE2-221ENST00000556342 USMG5Q96IX5 58 aa8.09□□□□□ -1.11
SYNE2-221ENST00000556342 TM2D1Q9BX74 207 aa8.09□□□□□ -1.11
SYNE2-221ENST00000556342 TMEM59Q9BXS4 323 aa8.09□□□□□ -1.11
SYNE2-221ENST00000556342 SLC2A8Q9NY64 477 aa8.09□□□□□ -1.11
SYNE2-221ENST00000556342 TRBV6-6A0A0A6YYG2 114 aa8.08□□□□□ -1.12
SYNE2-221ENST00000556342 ZNF785A8K8V0 405 aa8.08□□□□□ -1.12
SYNE2-221ENST00000556342 RBMXL2O75526 392 aaKnown RBP8.08□□□□□ -1.12
SYNE2-221ENST00000556342 IGLV2-23P01705 113 aa8.08□□□□□ -1.12
SYNE2-221ENST00000556342 CRYGBP07316 175 aa8.08□□□□□ -1.12
SYNE2-221ENST00000556342 CD7P09564 240 aa8.08□□□□□ -1.12
SYNE2-221ENST00000556342 LGALS7P47929 136 aa8.08□□□□□ -1.12
SYNE2-221ENST00000556342 HLA-DRB3P79483 266 aa8.08□□□□□ -1.12
SYNE2-221ENST00000556342 CD300EQ496F6 205 aaPredicted RBP8.08□□□□□ -1.12
SYNE2-221ENST00000556342 DEFB125Q8N687 156 aa8.08□□□□□ -1.12
SYNE2-221ENST00000556342 SNAPC3Q92966 411 aa8.08□□□□□ -1.12
SYNE2-221ENST00000556342 PTX4Q96A99 478 aa8.08□□□□□ -1.12
SYNE2-221ENST00000556342 TMEM80Q96HE8 168 aa8.08□□□□□ -1.12
SYNE2-221ENST00000556342 NICN1Q9BSH3 213 aa8.08□□□□□ -1.12
SYNE2-221ENST00000556342 WFDC10AQ9H1F0 79 aa8.08□□□□□ -1.12
SYNE2-221ENST00000556342 RIMS4Q9H426 269 aaPredicted RBP8.08□□□□□ -1.12
SYNE2-221ENST00000556342 SRD5A3Q9H8P0 318 aa8.08□□□□□ -1.12
SYNE2-221ENST00000556342 PLEKHJ1Q9NW61 149 aa8.08□□□□□ -1.12
SYNE2-221ENST00000556342 COA4Q9NYJ1 87 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms