RNA–Protein interactions for RNA: ENST00000556210.1

CUX1-215, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-215ENST00000556210 A0A0G2JRQ6 117 aa12.58□□□□□ -0.4
CUX1-215ENST00000556210 ETV2O00321 342 aaPredicted RBP12.58□□□□□ -0.4
CUX1-215ENST00000556210 RAMP3O60896 148 aa12.58□□□□□ -0.4
CUX1-215ENST00000556210 IGHV3-48P01763 117 aa12.58□□□□□ -0.4
CUX1-215ENST00000556210 CYC1P08574 325 aa12.58□□□□□ -0.4
CUX1-215ENST00000556210 PRB3Q04118 309 aaPredicted RBP12.58□□□□□ -0.4
CUX1-215ENST00000556210 RAB31Q13636 194 aa12.58□□□□□ -0.4
CUX1-215ENST00000556210 PLGLAQ15195 96 aa12.58□□□□□ -0.4
CUX1-215ENST00000556210 DECR2Q9NUI1 292 aa12.58□□□□□ -0.4
CUX1-215ENST00000556210 PITPNC1Q9UKF7 332 aa12.58□□□□□ -0.4
CUX1-215ENST00000556210 K7N7A8 449 aa12.57□□□□□ -0.4
CUX1-215ENST00000556210 COX5AP20674 150 aa12.57□□□□□ -0.4
CUX1-215ENST00000556210 TMEM171Q8WVE6 324 aa12.57□□□□□ -0.4
CUX1-215ENST00000556210 IER2Q9BTL4 223 aa12.57□□□□□ -0.4
CUX1-215ENST00000556210 LRFN3Q9BTN0 628 aa12.57□□□□□ -0.4
CUX1-215ENST00000556210 VSTM5A8MXK1 200 aa12.57□□□□□ -0.4
CUX1-215ENST00000556210 H0Y980 276 aa12.57□□□□□ -0.4
CUX1-215ENST00000556210 TCAPO15273 167 aa12.57□□□□□ -0.4
CUX1-215ENST00000556210 PAGE4O60829 102 aa12.57□□□□□ -0.4
CUX1-215ENST00000556210 HERPUD1Q15011 391 aa12.57□□□□□ -0.4
CUX1-215ENST00000556210 BSXQ3C1V8 233 aa12.57□□□□□ -0.4
CUX1-215ENST00000556210 CYB5R2Q6BCY4 276 aa12.57□□□□□ -0.4
CUX1-215ENST00000556210 SLC35E3Q7Z769 313 aa12.57□□□□□ -0.4
CUX1-215ENST00000556210 KDF1Q8NAX2 398 aaPredicted RBP12.57□□□□□ -0.4
CUX1-215ENST00000556210 R3HDM4Q96D70 268 aa12.57□□□□□ -0.4
CUX1-215ENST00000556210 FRYQ5TBA9 3013 aa12.57□□□□□ -0.4
CUX1-215ENST00000556210 OR7C2O60412 319 aa12.57□□□□□ -0.4
CUX1-215ENST00000556210 WISP2O76076 250 aa12.57□□□□□ -0.4
CUX1-215ENST00000556210 CISD2Q8N5K1 135 aaKnown RBP12.57□□□□□ -0.4
CUX1-215ENST00000556210 ACY3Q96HD9 319 aa12.57□□□□□ -0.4
CUX1-215ENST00000556210 SAMD10Q9BYL1 202 aa12.57□□□□□ -0.4
CUX1-215ENST00000556210 B4DEV8 164 aa12.56□□□□□ -0.4
CUX1-215ENST00000556210 C12orf77C9JDV5 145 aa12.56□□□□□ -0.4
CUX1-215ENST00000556210 BCL2P10415 239 aa12.56□□□□□ -0.4
CUX1-215ENST00000556210 MGST1P10620 155 aaKnown RBP12.56□□□□□ -0.4
CUX1-215ENST00000556210 PRDX2P32119 198 aa12.56□□□□□ -0.4
CUX1-215ENST00000556210 ELOBQ15370 118 aa12.56□□□□□ -0.4
CUX1-215ENST00000556210 LRP11Q86VZ4 500 aa12.56□□□□□ -0.4
CUX1-215ENST00000556210 WDYHV1Q96HA8 205 aa12.56□□□□□ -0.4
CUX1-215ENST00000556210 OR2V2Q96R30 315 aa12.56□□□□□ -0.4
CUX1-215ENST00000556210 ACTR3CQ9C0K3 210 aaPredicted RBP12.56□□□□□ -0.4
CUX1-215ENST00000556210 CXXC4Q9H2H0 198 aa12.56□□□□□ -0.4
CUX1-215ENST00000556210 VSIRQ9H7M9 311 aa12.56□□□□□ -0.4
CUX1-215ENST00000556210 PLA2G2EQ9NZK7 142 aa12.56□□□□□ -0.4
CUX1-215ENST00000556210 ZNF320A2RRD8 509 aa12.56□□□□□ -0.4
CUX1-215ENST00000556210 C17orf112F2Z3M2 114 aa12.56□□□□□ -0.4
CUX1-215ENST00000556210 CLDN14O95500 239 aa12.56□□□□□ -0.4
CUX1-215ENST00000556210 ERVFRD-1P60508 538 aa12.56□□□□□ -0.4
CUX1-215ENST00000556210 CEACAM18A8MTB9 384 aa12.56□□□□□ -0.4
CUX1-215ENST00000556210 PSPNO60542 156 aa12.56□□□□□ -0.4
CUX1-215ENST00000556210 TOX4O94842 621 aa12.56□□□□□ -0.4
CUX1-215ENST00000556210 IGHV2-70P01814 119 aa12.56□□□□□ -0.4
CUX1-215ENST00000556210 FUT9Q9Y231 359 aa12.56□□□□□ -0.4
CUX1-215ENST00000556210 TRAV38-1A0A0B4J264 116 aa12.55□□□□□ -0.4
CUX1-215ENST00000556210 A0A1B0GU03 582 aa12.55□□□□□ -0.4
CUX1-215ENST00000556210 C17orf98A8MV24 154 aa12.55□□□□□ -0.4
CUX1-215ENST00000556210 SMPD2O60906 423 aa12.55□□□□□ -0.4
CUX1-215ENST00000556210 CA11O75493 328 aa12.55□□□□□ -0.4
CUX1-215ENST00000556210 SELLP14151 372 aa12.55□□□□□ -0.4
CUX1-215ENST00000556210 GPX4P36969 197 aaPredicted RBP12.55□□□□□ -0.4
CUX1-215ENST00000556210 MDH2P40926 338 aaKnown RBP12.55□□□□□ -0.4
CUX1-215ENST00000556210 BCL2L2Q92843 193 aaPredicted RBP12.55□□□□□ -0.4
CUX1-215ENST00000556210 C18orf12Q96KH6 178 aa12.55□□□□□ -0.4
CUX1-215ENST00000556210 IGKV1-6A0A0C4DH72 117 aa12.55□□□□□ -0.4
CUX1-215ENST00000556210 CECR9P0C854 216 aa12.55□□□□□ -0.4
CUX1-215ENST00000556210 HIST1H1BP16401 226 aaKnown RBP12.55□□□□□ -0.4
CUX1-215ENST00000556210 RPL29P47914 159 aaKnown RBP12.55□□□□□ -0.4
CUX1-215ENST00000556210 TNFSF10P50591 281 aa12.55□□□□□ -0.4
CUX1-215ENST00000556210 KLF3P57682 345 aaPredicted RBP12.55□□□□□ -0.4
CUX1-215ENST00000556210 FOXC1Q12948 553 aa12.55□□□□□ -0.4
CUX1-215ENST00000556210 BHLHA15Q7RTS1 189 aaPredicted RBP12.55□□□□□ -0.4
CUX1-215ENST00000556210 C9orf106Q8NAJ2 232 aa12.55□□□□□ -0.4
CUX1-215ENST00000556210 CCL13Q99616 98 aa12.55□□□□□ -0.4
CUX1-215ENST00000556210 RBKSQ9H477 322 aa12.55□□□□□ -0.4
CUX1-215ENST00000556210 SEBOXQ9HB31 216 aaPredicted RBP12.55□□□□□ -0.4
CUX1-215ENST00000556210 TUBG2Q9NRH3 451 aa12.55□□□□□ -0.4
CUX1-215ENST00000556210 MED12LQ86YW9 2145 aa12.55□□□□□ -0.4
CUX1-215ENST00000556210 CYB5R3P00387 301 aaPredicted RBP12.55□□□□□ -0.4
CUX1-215ENST00000556210 HIST1H3AP68431 136 aa12.55□□□□□ -0.4
CUX1-215ENST00000556210 Q6ZRM9 215 aa12.55□□□□□ -0.4
CUX1-215ENST00000556210 EDARADDQ8WWZ3 215 aa12.55□□□□□ -0.4
CUX1-215ENST00000556210 VAX2Q9UIW0 290 aa12.55□□□□□ -0.4
CUX1-215ENST00000556210 IGHV2-5P01817 119 aa12.54□□□□□ -0.4
CUX1-215ENST00000556210 TNFAIP6P98066 277 aaPredicted RBP12.54□□□□□ -0.4
CUX1-215ENST00000556210 RPL39P5Q59GN2 51 aa12.54□□□□□ -0.4
CUX1-215ENST00000556210 REC114Q7Z4M0 266 aa12.54□□□□□ -0.4
CUX1-215ENST00000556210 ABHD12Q8N2K0 398 aa12.54□□□□□ -0.4
CUX1-215ENST00000556210 ITLN1Q8WWA0 313 aa12.54□□□□□ -0.4
CUX1-215ENST00000556210 METRNQ9UJH8 293 aa12.54□□□□□ -0.4
CUX1-215ENST00000556210 YLPM1P49750 1951 aaKnown RBP12.54□□□□□ -0.4
CUX1-215ENST00000556210 SOD3P08294 240 aa12.54□□□□□ -0.4
CUX1-215ENST00000556210 UCP1P25874 307 aa12.54□□□□□ -0.4
CUX1-215ENST00000556210 GNB1P62873 340 aa12.54□□□□□ -0.4
CUX1-215ENST00000556210 MOB1BQ7L9L4 216 aa12.54□□□□□ -0.4
CUX1-215ENST00000556210 OR13A1Q8NGR1 328 aa12.54□□□□□ -0.4
CUX1-215ENST00000556210 WFIKKN1Q96NZ8 548 aa12.54□□□□□ -0.4
CUX1-215ENST00000556210 OOEPA6NGQ2 149 aa12.54□□□□□ -0.4
CUX1-215ENST00000556210 CDX4O14627 284 aaPredicted RBP12.54□□□□□ -0.4
CUX1-215ENST00000556210 PRRG2O14669 202 aa12.54□□□□□ -0.4
CUX1-215ENST00000556210 DKK1O94907 266 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms