RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 SIRPDQ9H106 197 aa7.87□□□□□ -1.15
HNRNPC-220ENST00000555585 POLR3KQ9Y2Y1 108 aaPredicted RBP7.87□□□□□ -1.15
HNRNPC-220ENST00000555585 AMMECR1Q9Y4X0 333 aaPredicted RBP7.87□□□□□ -1.15
HNRNPC-220ENST00000555585 INSIG2Q9Y5U4 225 aa7.87□□□□□ -1.15
HNRNPC-220ENST00000555585 TMEM56-RWDD3S4R434 201 aa7.87□□□□□ -1.15
HNRNPC-220ENST00000555585 CRYBG3Q68DQ2 2970 aa7.87□□□□□ -1.15
HNRNPC-220ENST00000555585 PIGBOS1A0A0B4J2F0 54 aa7.86□□□□□ -1.15
HNRNPC-220ENST00000555585 DUXBA0A1W2PPF3 345 aa7.86□□□□□ -1.15
HNRNPC-220ENST00000555585 A0A1W2PRD5 423 aa7.86□□□□□ -1.15
HNRNPC-220ENST00000555585 A0A1W2PRF3 423 aa7.86□□□□□ -1.15
HNRNPC-220ENST00000555585 A0A1W2PRM7 423 aa7.86□□□□□ -1.15
HNRNPC-220ENST00000555585 SMLR1H3BR10 107 aa7.86□□□□□ -1.15
HNRNPC-220ENST00000555585 OR2A4O95047 310 aa7.86□□□□□ -1.15
HNRNPC-220ENST00000555585 CDS2O95674 445 aa7.86□□□□□ -1.15
HNRNPC-220ENST00000555585 KIR2DS2P43631 304 aa7.86□□□□□ -1.15
HNRNPC-220ENST00000555585 REG1BP48304 166 aa7.86□□□□□ -1.15
HNRNPC-220ENST00000555585 HLA-DRB5Q30154 266 aa7.86□□□□□ -1.15
HNRNPC-220ENST00000555585 ZFP69Q49AA0 526 aa7.86□□□□□ -1.15
HNRNPC-220ENST00000555585 ZNF585BQ52M93 769 aa7.86□□□□□ -1.15
HNRNPC-220ENST00000555585 PRSS57Q6UWY2 283 aa7.86□□□□□ -1.15
HNRNPC-220ENST00000555585 PDZD9Q8IXQ8 264 aa7.86□□□□□ -1.15
HNRNPC-220ENST00000555585 LINC00528Q8N1L1 170 aa7.86□□□□□ -1.15
HNRNPC-220ENST00000555585 BEND2Q8NDZ0 799 aa7.86□□□□□ -1.15
HNRNPC-220ENST00000555585 CD300LFQ8TDQ1 290 aa7.86□□□□□ -1.15
HNRNPC-220ENST00000555585 WDR89Q96FK6 387 aaPredicted RBP7.86□□□□□ -1.15
HNRNPC-220ENST00000555585 OR10C1Q96KK4 312 aa7.86□□□□□ -1.15
HNRNPC-220ENST00000555585 C2orf50Q96LR7 162 aa7.86□□□□□ -1.15
HNRNPC-220ENST00000555585 Q96MF0 132 aa7.86□□□□□ -1.15
HNRNPC-220ENST00000555585 OR2A7Q96R45 310 aa7.86□□□□□ -1.15
HNRNPC-220ENST00000555585 ZNF251Q9BRH9 671 aa7.86□□□□□ -1.15
HNRNPC-220ENST00000555585 REG4Q9BYZ8 158 aa7.86□□□□□ -1.15
HNRNPC-220ENST00000555585 COMMD9Q9P000 198 aa7.86□□□□□ -1.15
HNRNPC-220ENST00000555585 GSKIPQ9P0R6 139 aa7.86□□□□□ -1.15
HNRNPC-220ENST00000555585 TMED3Q9Y3Q3 217 aa7.86□□□□□ -1.15
HNRNPC-220ENST00000555585 ARID1AO14497 2285 aa7.86□□□□□ -1.15
HNRNPC-220ENST00000555585 FBN2P35556 2912 aa7.85□□□□□ -1.15
HNRNPC-220ENST00000555585 MPTX1A8MV57 137 aa7.85□□□□□ -1.15
HNRNPC-220ENST00000555585 B4DSR2 109 aa7.85□□□□□ -1.15
HNRNPC-220ENST00000555585 BUB1B-PAK6H3BSN5 160 aa7.85□□□□□ -1.15
HNRNPC-220ENST00000555585 RAMP3O60896 148 aa7.85□□□□□ -1.15
HNRNPC-220ENST00000555585 ATG12O94817 140 aa7.85□□□□□ -1.15
HNRNPC-220ENST00000555585 S1PR2O95136 353 aa7.85□□□□□ -1.15
HNRNPC-220ENST00000555585 IGLV1-47P01700 117 aa7.85□□□□□ -1.15
HNRNPC-220ENST00000555585 APOA2P02652 100 aa7.85□□□□□ -1.15
HNRNPC-220ENST00000555585 MSMBP08118 114 aa7.85□□□□□ -1.15
HNRNPC-220ENST00000555585 CT45A6P0DMU7 189 aa7.85□□□□□ -1.15
HNRNPC-220ENST00000555585 CT45A5P0DMU8 189 aa7.85□□□□□ -1.15
HNRNPC-220ENST00000555585 CT45A7P0DMV0 189 aa7.85□□□□□ -1.15
HNRNPC-220ENST00000555585 RPA2P15927 270 aa7.85□□□□□ -1.15
HNRNPC-220ENST00000555585 HOXB4P17483 251 aaPredicted RBP7.85□□□□□ -1.15
HNRNPC-220ENST00000555585 EPHA1P21709 976 aa7.85□□□□□ -1.15
HNRNPC-220ENST00000555585 AKR1C2P52895 323 aa7.85□□□□□ -1.15
HNRNPC-220ENST00000555585 CYCSP99999 105 aaKnown RBP7.85□□□□□ -1.15
HNRNPC-220ENST00000555585 LOXL1Q08397 574 aaPredicted RBP7.85□□□□□ -1.15
HNRNPC-220ENST00000555585 IAH1Q2TAA2 248 aaPredicted RBP7.85□□□□□ -1.15
HNRNPC-220ENST00000555585 THOC7Q6I9Y2 204 aaKnown RBP7.85□□□□□ -1.15
HNRNPC-220ENST00000555585 FAM71F2Q6NXP2 309 aa7.85□□□□□ -1.15
HNRNPC-220ENST00000555585 TGIF2LXQ8IUE1 241 aa7.85□□□□□ -1.15
HNRNPC-220ENST00000555585 ZNF383Q8NA42 475 aa7.85□□□□□ -1.15
HNRNPC-220ENST00000555585 OR11H6Q8NGC7 330 aa7.85□□□□□ -1.15
HNRNPC-220ENST00000555585 OR2T35Q8NGX2 323 aa7.85□□□□□ -1.15
HNRNPC-220ENST00000555585 ASB13Q8WXK3 278 aa7.85□□□□□ -1.15
HNRNPC-220ENST00000555585 LHX4Q969G2 390 aa7.85□□□□□ -1.15
HNRNPC-220ENST00000555585 RRNAD1Q96FB5 475 aaKnown RBP7.85□□□□□ -1.15
HNRNPC-220ENST00000555585 TBX15Q96SF7 602 aa7.85□□□□□ -1.15
HNRNPC-220ENST00000555585 MRPL20Q9BYC9 149 aaKnown RBP7.85□□□□□ -1.15
HNRNPC-220ENST00000555585 RANBP3Q9H6Z4 567 aaPredicted RBP7.85□□□□□ -1.15
HNRNPC-220ENST00000555585 FAM212BQ9NTI7 297 aaPredicted RBP7.85□□□□□ -1.15
HNRNPC-220ENST00000555585 SLC35D1Q9NTN3 355 aa7.85□□□□□ -1.15
HNRNPC-220ENST00000555585 A0A096LNT2 108 aa7.84□□□□□ -1.15
HNRNPC-220ENST00000555585 TRAV20A0A0B4J274 112 aa7.84□□□□□ -1.15
HNRNPC-220ENST00000555585 LEUTXA8MZ59 168 aa7.84□□□□□ -1.15
HNRNPC-220ENST00000555585 RNASEK-C17orf49H0YIS7 233 aa7.84□□□□□ -1.15
HNRNPC-220ENST00000555585 H7C2Y5 167 aa7.84□□□□□ -1.15
HNRNPC-220ENST00000555585 SCGB1D2O95969 90 aa7.84□□□□□ -1.15
HNRNPC-220ENST00000555585 HPRT1P00492 218 aa7.84□□□□□ -1.15
HNRNPC-220ENST00000555585 IGKV1-39P01597 117 aa7.84□□□□□ -1.15
HNRNPC-220ENST00000555585 C1QBP02746 253 aa7.84□□□□□ -1.15
HNRNPC-220ENST00000555585 GAPDHP04406 335 aaKnown RBP7.84□□□□□ -1.15
HNRNPC-220ENST00000555585 IGKV1D-39P04432 117 aa7.84□□□□□ -1.15
HNRNPC-220ENST00000555585 MMP9P14780 707 aa7.84□□□□□ -1.15
HNRNPC-220ENST00000555585 VDAC1P21796 283 aa7.84□□□□□ -1.15
HNRNPC-220ENST00000555585 HTR1DP28221 377 aa7.84□□□□□ -1.15
HNRNPC-220ENST00000555585 CEACAM3P40198 252 aa7.84□□□□□ -1.15
HNRNPC-220ENST00000555585 EIF2B2P49770 351 aaKnown RBP7.84□□□□□ -1.15
HNRNPC-220ENST00000555585 ZNF137PP52743 207 aa7.84□□□□□ -1.15
HNRNPC-220ENST00000555585 LGALS4P56470 323 aa7.84□□□□□ -1.15
HNRNPC-220ENST00000555585 BRWD1-AS2P59051 145 aa7.84□□□□□ -1.15
HNRNPC-220ENST00000555585 PAX8Q06710 450 aa7.84□□□□□ -1.15
HNRNPC-220ENST00000555585 SRSF4Q08170 494 aaKnown RBP7.84□□□□□ -1.15
HNRNPC-220ENST00000555585 DIAPH2-AS1Q14236 149 aa7.84□□□□□ -1.15
HNRNPC-220ENST00000555585 RTL8BQ17RB0 113 aa7.84□□□□□ -1.15
HNRNPC-220ENST00000555585 LRRC37A5PQ49AS3 106 aa7.84□□□□□ -1.15
HNRNPC-220ENST00000555585 TPTE2P1Q5T6R2 138 aa7.84□□□□□ -1.15
HNRNPC-220ENST00000555585 HCP5Q6MZN7 132 aa7.84□□□□□ -1.15
HNRNPC-220ENST00000555585 MOB3BQ86TA1 216 aa7.84□□□□□ -1.15
HNRNPC-220ENST00000555585 LINC01356Q8N9X3 169 aa7.84□□□□□ -1.15
HNRNPC-220ENST00000555585 ZBTB8BQ8NAP8 495 aaPredicted RBP7.84□□□□□ -1.15
HNRNPC-220ENST00000555585 MAPK1IP1LQ8NDC0 245 aa7.84□□□□□ -1.15
HNRNPC-220ENST00000555585 OR4P4Q8NGL7 312 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms