RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 A0A0A6YYH2 397 aa10.69□□□□□ -0.7
SNX6-203ENST00000555416 A6NJ64 397 aa10.69□□□□□ -0.7
SNX6-203ENST00000555416 SRRM4A7MD48 611 aaKnown RBP10.69□□□□□ -0.7
SNX6-203ENST00000555416 XRCC3O43542 346 aa10.69□□□□□ -0.7
SNX6-203ENST00000555416 IGHG4P01861 327 aa10.69□□□□□ -0.7
SNX6-203ENST00000555416 PRB2P02812 416 aaPredicted RBP10.69□□□□□ -0.7
SNX6-203ENST00000555416 EIF4EP06730 217 aaKnown RBP10.69□□□□□ -0.7
SNX6-203ENST00000555416 PF4V1P10720 104 aa10.69□□□□□ -0.7
SNX6-203ENST00000555416 ALDH3B2P48448 385 aa10.69□□□□□ -0.7
SNX6-203ENST00000555416 RPS16P62249 146 aaKnown RBP10.69□□□□□ -0.7
SNX6-203ENST00000555416 SLC35B1P78383 322 aa10.69□□□□□ -0.7
SNX6-203ENST00000555416 SSBP2P81877 361 aaPredicted RBP10.69□□□□□ -0.7
SNX6-203ENST00000555416 FOXE3Q13461 319 aa10.69□□□□□ -0.7
SNX6-203ENST00000555416 UBE2NLQ5JXB2 153 aa10.69□□□□□ -0.7
SNX6-203ENST00000555416 GPR107Q5VW38 600 aa10.69□□□□□ -0.7
SNX6-203ENST00000555416 TEX38Q6PEX7 206 aa10.69□□□□□ -0.7
SNX6-203ENST00000555416 CNIH2Q6PI25 160 aa10.69□□□□□ -0.7
SNX6-203ENST00000555416 HOGA1Q86XE5 327 aa10.69□□□□□ -0.7
SNX6-203ENST00000555416 ANKRD13BQ86YJ7 626 aa10.69□□□□□ -0.7
SNX6-203ENST00000555416 RNF152Q8N8N0 203 aa10.69□□□□□ -0.7
SNX6-203ENST00000555416 BVESQ8NE79 360 aa10.69□□□□□ -0.7
SNX6-203ENST00000555416 WFDC9Q8NEX5 89 aa10.69□□□□□ -0.7
SNX6-203ENST00000555416 BEST4Q8NFU0 473 aa10.69□□□□□ -0.7
SNX6-203ENST00000555416 DDB2Q92466 427 aa10.69□□□□□ -0.7
SNX6-203ENST00000555416 SNAPC3Q92966 411 aa10.69□□□□□ -0.7
SNX6-203ENST00000555416 DIABLOQ9NR28 239 aa10.69□□□□□ -0.7
SNX6-203ENST00000555416 SLC35D1Q9NTN3 355 aa10.69□□□□□ -0.7
SNX6-203ENST00000555416 KIAA1456Q9P272 454 aa10.69□□□□□ -0.7
SNX6-203ENST00000555416 METTL1Q9UBP6 276 aaKnown RBP10.69□□□□□ -0.7
SNX6-203ENST00000555416 ZNF580Q9UK33 172 aa10.69□□□□□ -0.7
SNX6-203ENST00000555416 OR2W1Q9Y3N9 320 aa10.69□□□□□ -0.7
SNX6-203ENST00000555416 RBM7Q9Y580 266 aaKnown RBP10.69□□□□□ -0.7
SNX6-203ENST00000555416 SLC25A17O43808 307 aa10.68□□□□□ -0.7
SNX6-203ENST00000555416 SOX15O60248 233 aa10.68□□□□□ -0.7
SNX6-203ENST00000555416 TMEM127O75204 238 aa10.68□□□□□ -0.7
SNX6-203ENST00000555416 RBBP9O75884 186 aa10.68□□□□□ -0.7
SNX6-203ENST00000555416 TUSC2O75896 110 aa10.68□□□□□ -0.7
SNX6-203ENST00000555416 GABARAPO95166 117 aa10.68□□□□□ -0.7
SNX6-203ENST00000555416 HLA-DQB1P01920 261 aa10.68□□□□□ -0.7
SNX6-203ENST00000555416 APOA2P02652 100 aa10.68□□□□□ -0.7
SNX6-203ENST00000555416 IGLL1P15814 213 aa10.68□□□□□ -0.7
SNX6-203ENST00000555416 PSMB8P28062 276 aa10.68□□□□□ -0.7
SNX6-203ENST00000555416 DUTP33316 252 aaKnown RBP10.68□□□□□ -0.7
SNX6-203ENST00000555416 TAS2R20P59543 309 aa10.68□□□□□ -0.7
SNX6-203ENST00000555416 PJVKQ0ZLH3 352 aa10.68□□□□□ -0.7
SNX6-203ENST00000555416 KIAA0141Q14154 515 aaPredicted RBP10.68□□□□□ -0.7
SNX6-203ENST00000555416 MRGPRG-AS1Q2M3A8 158 aa10.68□□□□□ -0.7
SNX6-203ENST00000555416 DEFB136Q30KP8 78 aa10.68□□□□□ -0.7
SNX6-203ENST00000555416 PDPNQ86YL7 162 aa10.68□□□□□ -0.7
SNX6-203ENST00000555416 CROCCP3Q8IVE0 287 aa10.68□□□□□ -0.7
SNX6-203ENST00000555416 COMMD1Q8N668 190 aa10.68□□□□□ -0.7
SNX6-203ENST00000555416 LINC00482Q8N8I6 264 aa10.68□□□□□ -0.7
SNX6-203ENST00000555416 KLHL30-AS1Q8NEE0 82 aa10.68□□□□□ -0.7
SNX6-203ENST00000555416 CASTOR1Q8WTX7 329 aa10.68□□□□□ -0.7
SNX6-203ENST00000555416 GPHA2Q96T91 129 aa10.68□□□□□ -0.7
SNX6-203ENST00000555416 FAM103A1Q9BTL3 118 aaKnown RBP10.68□□□□□ -0.7
SNX6-203ENST00000555416 TRAV41A0A0B4J266 112 aa10.67□□□□□ -0.7
SNX6-203ENST00000555416 NUDT19A8MXV4 375 aa10.67□□□□□ -0.7
SNX6-203ENST00000555416 ARPC1BO15143 372 aaKnown RBP10.67□□□□□ -0.7
SNX6-203ENST00000555416 IGLV1-40P01703 118 aa10.67□□□□□ -0.7
SNX6-203ENST00000555416 PF4P02776 101 aa10.67□□□□□ -0.7
SNX6-203ENST00000555416 CRYGBP07316 175 aa10.67□□□□□ -0.7
SNX6-203ENST00000555416 CTXN2P0C2S0 81 aa10.67□□□□□ -0.7
SNX6-203ENST00000555416 VDAC1P21796 283 aa10.67□□□□□ -0.7
SNX6-203ENST00000555416 THBS3P49746 956 aa10.67□□□□□ -0.7
SNX6-203ENST00000555416 LUMP51884 338 aaPredicted RBP10.67□□□□□ -0.7
SNX6-203ENST00000555416 RPL30P62888 115 aaKnown RBP10.67□□□□□ -0.7
SNX6-203ENST00000555416 EIF4EBP1Q13541 118 aaPredicted RBP10.67□□□□□ -0.7
SNX6-203ENST00000555416 PLGLAQ15195 96 aa10.67□□□□□ -0.7
SNX6-203ENST00000555416 KPRPQ5T749 579 aaPredicted RBP10.67□□□□□ -0.7
SNX6-203ENST00000555416 DMRTA1Q5VZB9 504 aa10.67□□□□□ -0.7
SNX6-203ENST00000555416 MRPL41Q8IXM3 137 aaKnown RBP10.67□□□□□ -0.7
SNX6-203ENST00000555416 MINDY2Q8NBR6 621 aa10.67□□□□□ -0.7
SNX6-203ENST00000555416 MYOZ3Q8TDC0 251 aa10.67□□□□□ -0.7
SNX6-203ENST00000555416 FLYWCH2Q96CP2 140 aaKnown RBP10.67□□□□□ -0.7
SNX6-203ENST00000555416 S100A16Q96FQ6 103 aaKnown RBP10.67□□□□□ -0.7
SNX6-203ENST00000555416 RAX2Q96IS3 184 aa10.67□□□□□ -0.7
SNX6-203ENST00000555416 RNF5Q99942 180 aa10.67□□□□□ -0.7
SNX6-203ENST00000555416 MRPS26Q9BYN8 205 aaKnown RBP10.67□□□□□ -0.7
SNX6-203ENST00000555416 ZFP57Q9NU63 452 aa10.67□□□□□ -0.7
SNX6-203ENST00000555416 COMMD3Q9UBI1 195 aa10.67□□□□□ -0.7
SNX6-203ENST00000555416 A3GALT2U3KPV4 340 aa10.67□□□□□ -0.7
SNX6-203ENST00000555416 HPGDSO60760 199 aa10.66□□□□□ -0.7
SNX6-203ENST00000555416 CA2P00918 260 aa10.66□□□□□ -0.7
SNX6-203ENST00000555416 ELANEP08246 267 aa10.66□□□□□ -0.7
SNX6-203ENST00000555416 CD33P20138 364 aa10.66□□□□□ -0.7
SNX6-203ENST00000555416 AADACP22760 399 aa10.66□□□□□ -0.7
SNX6-203ENST00000555416 CRIP2P52943 208 aaPredicted RBP10.66□□□□□ -0.7
SNX6-203ENST00000555416 ECSCRQ19T08 205 aa10.66□□□□□ -0.7
SNX6-203ENST00000555416 PDLIM3Q53GG5 364 aaPredicted RBP10.66□□□□□ -0.7
SNX6-203ENST00000555416 TMEM177Q53S58 311 aa10.66□□□□□ -0.7
SNX6-203ENST00000555416 CXorf66Q5JRM2 361 aaPredicted RBP10.66□□□□□ -0.7
SNX6-203ENST00000555416 ZNF660Q6AZW8 331 aaPredicted RBP10.66□□□□□ -0.7
SNX6-203ENST00000555416 ZNF695Q8IW36 515 aa10.66□□□□□ -0.7
SNX6-203ENST00000555416 ZNF645Q8N7E2 425 aa10.66□□□□□ -0.7
SNX6-203ENST00000555416 KCTD12Q96CX2 325 aaKnown RBP10.66□□□□□ -0.7
SNX6-203ENST00000555416 P2RX4Q99571 388 aa10.66□□□□□ -0.7
SNX6-203ENST00000555416 TSNAXQ99598 290 aaKnown RBP10.66□□□□□ -0.7
SNX6-203ENST00000555416 GON7Q9BXV9 100 aa10.66□□□□□ -0.7
SNX6-203ENST00000555416 ANAPC10Q9UM13 185 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms