RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 OR13C8Q8NGS7 320 aa10.16□□□□□ -0.78
SYNE2-219ENST00000555323 ZFAND2BQ8WV99 257 aa10.16□□□□□ -0.78
SYNE2-219ENST00000555323 CAPSLQ8WWF8 208 aa10.16□□□□□ -0.78
SYNE2-219ENST00000555323 ZNF486Q96H40 463 aaPredicted RBP10.16□□□□□ -0.78
SYNE2-219ENST00000555323 HSD17B10Q99714 261 aaKnown RBP10.16□□□□□ -0.78
SYNE2-219ENST00000555323 RNF5Q99942 180 aa10.16□□□□□ -0.78
SYNE2-219ENST00000555323 C7orf50Q9BRJ6 194 aaKnown RBP10.16□□□□□ -0.78
SYNE2-219ENST00000555323 CHIAQ9BZP6 476 aa10.16□□□□□ -0.78
SYNE2-219ENST00000555323 FXYD6Q9H0Q3 95 aa10.16□□□□□ -0.78
SYNE2-219ENST00000555323 SCP2D1Q9UJQ7 156 aa10.16□□□□□ -0.78
SYNE2-219ENST00000555323 IGHV3-72A0A0B4J1Y9 119 aa10.15□□□□□ -0.78
SYNE2-219ENST00000555323 NAP1L6A6NFF2 107 aa10.15□□□□□ -0.78
SYNE2-219ENST00000555323 LINC00473A8K010 186 aa10.15□□□□□ -0.78
SYNE2-219ENST00000555323 TRIM77I1YAP6 450 aa10.15□□□□□ -0.78
SYNE2-219ENST00000555323 GPR31O00270 319 aa10.15□□□□□ -0.78
SYNE2-219ENST00000555323 PLA2G10O15496 165 aa10.15□□□□□ -0.78
SYNE2-219ENST00000555323 IGKV1D-33P01593 117 aa10.15□□□□□ -0.78
SYNE2-219ENST00000555323 IGKV1-33P01594 117 aa10.15□□□□□ -0.78
SYNE2-219ENST00000555323 SNRNP70P08621 437 aaKnown RBP10.15□□□□□ -0.78
SYNE2-219ENST00000555323 CD24P25063 80 aa10.15□□□□□ -0.78
SYNE2-219ENST00000555323 INPP1P49441 399 aa10.15□□□□□ -0.78
SYNE2-219ENST00000555323 RPL30P62888 115 aaKnown RBP10.15□□□□□ -0.78
SYNE2-219ENST00000555323 ZNF57Q68EA5 555 aaPredicted RBP10.15□□□□□ -0.78
SYNE2-219ENST00000555323 C16orf82Q7Z2V1 217 aa10.15□□□□□ -0.78
SYNE2-219ENST00000555323 DRAXINQ8NBI3 349 aaPredicted RBP10.15□□□□□ -0.78
SYNE2-219ENST00000555323 OR2T10Q8NGZ9 312 aa10.15□□□□□ -0.78
SYNE2-219ENST00000555323 EAF1Q96JC9 268 aaPredicted RBP10.15□□□□□ -0.78
SYNE2-219ENST00000555323 RBM14Q96PK6 669 aaKnown RBP10.15□□□□□ -0.78
SYNE2-219ENST00000555323 GPR132Q9UNW8 380 aa10.15□□□□□ -0.78
SYNE2-219ENST00000555323 NIPBLQ6KC79 2804 aaeCLIP10.15□□□□□ -0.79
SYNE2-219ENST00000555323 PGLYRP1O75594 196 aaPredicted RBP10.14□□□□□ -0.79
SYNE2-219ENST00000555323 UPK1BO75841 260 aa10.14□□□□□ -0.79
SYNE2-219ENST00000555323 OR2F2O95006 317 aa10.14□□□□□ -0.79
SYNE2-219ENST00000555323 MOSP00540 346 aa10.14□□□□□ -0.79
SYNE2-219ENST00000555323 RRASP10301 218 aa10.14□□□□□ -0.79
SYNE2-219ENST00000555323 BRWD1-AS2P59051 145 aa10.14□□□□□ -0.79
SYNE2-219ENST00000555323 SCGB2B2Q4G0G5 96 aa10.14□□□□□ -0.79
SYNE2-219ENST00000555323 FBLN7Q53RD9 439 aa10.14□□□□□ -0.79
SYNE2-219ENST00000555323 GLDNQ6ZMI3 551 aaPredicted RBP10.14□□□□□ -0.79
SYNE2-219ENST00000555323 IDO2Q6ZQW0 420 aa10.14□□□□□ -0.79
SYNE2-219ENST00000555323 PDPNQ86YL7 162 aa10.14□□□□□ -0.79
SYNE2-219ENST00000555323 CMTM1Q8IZ96 169 aa10.14□□□□□ -0.79
SYNE2-219ENST00000555323 OR8H1Q8NGG4 311 aa10.14□□□□□ -0.79
SYNE2-219ENST00000555323 ZFAND1Q8TCF1 268 aa10.14□□□□□ -0.79
SYNE2-219ENST00000555323 SCGB3A2Q96PL1 93 aa10.14□□□□□ -0.79
SYNE2-219ENST00000555323 DUX5Q96PT3 197 aa10.14□□□□□ -0.79
SYNE2-219ENST00000555323 RAB18Q9NP72 206 aa10.14□□□□□ -0.79
SYNE2-219ENST00000555323 PLSCR3Q9NRY6 295 aa10.14□□□□□ -0.79
SYNE2-219ENST00000555323 MCUBQ9NWR8 336 aa10.14□□□□□ -0.79
SYNE2-219ENST00000555323 WASHC3Q9Y3C0 194 aa10.14□□□□□ -0.79
SYNE2-219ENST00000555323 CENPXA8MT69 81 aa10.13□□□□□ -0.79
SYNE2-219ENST00000555323 CTSDP07339 412 aaPredicted RBP10.13□□□□□ -0.79
SYNE2-219ENST00000555323 RND3P61587 244 aa10.13□□□□□ -0.79
SYNE2-219ENST00000555323 IFITM3Q01628 133 aa10.13□□□□□ -0.79
SYNE2-219ENST00000555323 LY6EQ16553 131 aa10.13□□□□□ -0.79
SYNE2-219ENST00000555323 TCTEX1D1Q8N7M0 179 aa10.13□□□□□ -0.79
SYNE2-219ENST00000555323 NPBQ8NG41 125 aa10.13□□□□□ -0.79
SYNE2-219ENST00000555323 OR4C13Q8NGP0 309 aa10.13□□□□□ -0.79
SYNE2-219ENST00000555323 RITA1Q96K30 269 aa10.13□□□□□ -0.79
SYNE2-219ENST00000555323 SLC25A21Q9BQT8 299 aaPredicted RBP10.13□□□□□ -0.79
SYNE2-219ENST00000555323 RTBDNQ9BSG5 229 aaPredicted RBP10.13□□□□□ -0.79
SYNE2-219ENST00000555323 FAM212BQ9NTI7 297 aaPredicted RBP10.13□□□□□ -0.79
SYNE2-219ENST00000555323 PRELID3BQ9Y3B1 194 aa10.13□□□□□ -0.79
SYNE2-219ENST00000555323 RBFOX2O43251 390 aaKnown RBP eCLIP10.12□□□□□ -0.79
SYNE2-219ENST00000555323 CHST1O43916 411 aa10.12□□□□□ -0.79
SYNE2-219ENST00000555323 GPR137BO60478 399 aa10.12□□□□□ -0.79
SYNE2-219ENST00000555323 APOA2P02652 100 aa10.12□□□□□ -0.79
SYNE2-219ENST00000555323 IGKV1-16P04430 117 aa10.12□□□□□ -0.79
SYNE2-219ENST00000555323 TMEM11P17152 192 aa10.12□□□□□ -0.79
SYNE2-219ENST00000555323 LGALS7P47929 136 aa10.12□□□□□ -0.79
SYNE2-219ENST00000555323 CATR1Q13166 79 aa10.12□□□□□ -0.79
SYNE2-219ENST00000555323 HES1Q14469 280 aa10.12□□□□□ -0.79
SYNE2-219ENST00000555323 TMEM177Q53S58 311 aa10.12□□□□□ -0.79
SYNE2-219ENST00000555323 DHRS7BQ6IAN0 325 aaPredicted RBP10.12□□□□□ -0.79
SYNE2-219ENST00000555323 KCTD9Q7L273 389 aa10.12□□□□□ -0.79
SYNE2-219ENST00000555323 MARCH1Q8TCQ1 289 aa10.12□□□□□ -0.79
SYNE2-219ENST00000555323 FLYWCH2Q96CP2 140 aaKnown RBP10.12□□□□□ -0.79
SYNE2-219ENST00000555323 SLC25A33Q9BSK2 321 aa10.12□□□□□ -0.79
SYNE2-219ENST00000555323 C5orf66Q9H5L9 145 aa10.12□□□□□ -0.79
SYNE2-219ENST00000555323 SLC2A9Q9NRM0 540 aa10.12□□□□□ -0.79
SYNE2-219ENST00000555323 TNFRSF19Q9NS68 423 aa10.12□□□□□ -0.79
SYNE2-219ENST00000555323 SLC35D1Q9NTN3 355 aa10.12□□□□□ -0.79
SYNE2-219ENST00000555323 C1RLQ9NZP8 487 aa10.12□□□□□ -0.79
SYNE2-219ENST00000555323 FAM181BA6NEQ2 426 aa10.11□□□□□ -0.79
SYNE2-219ENST00000555323 RNF212BA8MTL3 300 aa10.11□□□□□ -0.79
SYNE2-219ENST00000555323 H7C2Y5 167 aa10.11□□□□□ -0.79
SYNE2-219ENST00000555323 M0QZK8 103 aa10.11□□□□□ -0.79
SYNE2-219ENST00000555323 MPPED1O15442 326 aa10.11□□□□□ -0.79
SYNE2-219ENST00000555323 FGF16O43320 207 aa10.11□□□□□ -0.79
SYNE2-219ENST00000555323 LYRM1O43325 122 aa10.11□□□□□ -0.79
SYNE2-219ENST00000555323 TNFSF12O43508 249 aa10.11□□□□□ -0.79
SYNE2-219ENST00000555323 AMY1AP04745 511 aa10.11□□□□□ -0.79
SYNE2-219ENST00000555323 PGAM2P15259 253 aa10.11□□□□□ -0.79
SYNE2-219ENST00000555323 F2RP25116 425 aa10.11□□□□□ -0.79
SYNE2-219ENST00000555323 S100GP29377 79 aa10.11□□□□□ -0.79
SYNE2-219ENST00000555323 BTCP35070 178 aa10.11□□□□□ -0.79
SYNE2-219ENST00000555323 KIR2DS2P43631 304 aa10.11□□□□□ -0.79
SYNE2-219ENST00000555323 F2RL1P55085 397 aa10.11□□□□□ -0.79
SYNE2-219ENST00000555323 PIGPP57054 158 aa10.11□□□□□ -0.79
SYNE2-219ENST00000555323 RIPPLY3P57055 190 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms