RNA–Protein interactions for RNA: ENST00000555235.1

MARK3-209, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-209ENST00000555235 TMEM249Q2WGJ8 235 aa13.48□□□□□ -0.25
MARK3-209ENST00000555235 TPTE2P1Q5T6R2 138 aa13.48□□□□□ -0.25
MARK3-209ENST00000555235 FAM58AQ8N1B3 248 aa13.48□□□□□ -0.25
MARK3-209ENST00000555235 OR5P3Q8WZ94 311 aa13.48□□□□□ -0.25
MARK3-209ENST00000555235 SFRP2Q96HF1 295 aa13.48□□□□□ -0.25
MARK3-209ENST00000555235 LPAR2Q9HBW0 351 aa13.48□□□□□ -0.25
MARK3-209ENST00000555235 PILRBQ9UKJ0 227 aa13.48□□□□□ -0.25
MARK3-209ENST00000555235 ZNF407Q9C0G0 2248 aa13.48□□□□□ -0.25
MARK3-209ENST00000555235 MDFIC2A0A1B0GVS7 189 aa13.48□□□□□ -0.25
MARK3-209ENST00000555235 A6NNC1 897 aa13.48□□□□□ -0.25
MARK3-209ENST00000555235 CCNOP22674 350 aa13.48□□□□□ -0.25
MARK3-209ENST00000555235 ADMP35318 185 aa13.48□□□□□ -0.25
MARK3-209ENST00000555235 GFRA1P56159 465 aa13.48□□□□□ -0.25
MARK3-209ENST00000555235 GNB1P62873 340 aa13.48□□□□□ -0.25
MARK3-209ENST00000555235 TRA2AQ13595 282 aaKnown RBP eCLIP13.48□□□□□ -0.25
MARK3-209ENST00000555235 VWC2Q2TAL6 325 aa13.48□□□□□ -0.25
MARK3-209ENST00000555235 APOBEC3DQ96AK3 386 aaPredicted RBP13.48□□□□□ -0.25
MARK3-209ENST00000555235 ZDHHC11Q9H8X9 412 aa13.48□□□□□ -0.25
MARK3-209ENST00000555235 PMS2P5A8MQ11 134 aa13.47□□□□□ -0.25
MARK3-209ENST00000555235 TFF3Q07654 80 aa13.47□□□□□ -0.25
MARK3-209ENST00000555235 PPP1R32Q7Z5V6 425 aa13.47□□□□□ -0.25
MARK3-209ENST00000555235 CIB3Q96Q77 187 aaPredicted RBP13.47□□□□□ -0.25
MARK3-209ENST00000555235 DIRC2Q96SL1 478 aa13.47□□□□□ -0.25
MARK3-209ENST00000555235 LINC00470Q9BZP3 86 aa13.47□□□□□ -0.25
MARK3-209ENST00000555235 ARHGAP21Q5T5U3 1957 aa13.47□□□□□ -0.25
MARK3-209ENST00000555235 IGKV3D-15A0A087WSY6 115 aa13.47□□□□□ -0.25
MARK3-209ENST00000555235 PINLYPA6NC86 204 aa13.47□□□□□ -0.25
MARK3-209ENST00000555235 MRPL33O75394 65 aaKnown RBP13.47□□□□□ -0.25
MARK3-209ENST00000555235 KRASP01116 189 aa13.47□□□□□ -0.25
MARK3-209ENST00000555235 IGHEP01854 428 aa13.47□□□□□ -0.25
MARK3-209ENST00000555235 CCL2P13500 99 aa13.47□□□□□ -0.25
MARK3-209ENST00000555235 ARSJQ5FYB0 599 aaPredicted RBP13.47□□□□□ -0.25
MARK3-209ENST00000555235 Q6ZWC4 215 aa13.47□□□□□ -0.25
MARK3-209ENST00000555235 DRAM1Q8N682 238 aa13.47□□□□□ -0.25
MARK3-209ENST00000555235 RAB1CQ92928 201 aa13.47□□□□□ -0.25
MARK3-209ENST00000555235 TXNDC17Q9BRA2 123 aa13.47□□□□□ -0.25
MARK3-209ENST00000555235 VAMP8Q9BV40 100 aa13.47□□□□□ -0.25
MARK3-209ENST00000555235 PRRG4Q9BZD6 226 aa13.47□□□□□ -0.25
MARK3-209ENST00000555235 ZNF552Q9H707 407 aaPredicted RBP13.47□□□□□ -0.25
MARK3-209ENST00000555235 TRAV9-1A0A075B6T8 112 aa13.46□□□□□ -0.25
MARK3-209ENST00000555235 A0A096LPE4 126 aa13.46□□□□□ -0.25
MARK3-209ENST00000555235 A0A1W2PPZ6 126 aa13.46□□□□□ -0.25
MARK3-209ENST00000555235 C5orf49A4QMS7 147 aa13.46□□□□□ -0.25
MARK3-209ENST00000555235 GALR2O43603 387 aaPredicted RBP13.46□□□□□ -0.25
MARK3-209ENST00000555235 SS18L1O75177 396 aaPredicted RBP13.46□□□□□ -0.25
MARK3-209ENST00000555235 C1QTNF9P0C862 333 aa13.46□□□□□ -0.25
MARK3-209ENST00000555235 GDF1P27539 372 aa13.46□□□□□ -0.25
MARK3-209ENST00000555235 TNFSF10P50591 281 aa13.46□□□□□ -0.25
MARK3-209ENST00000555235 MRPS11P82912 194 aaKnown RBP13.46□□□□□ -0.25
MARK3-209ENST00000555235 PRR18Q8N4B5 295 aa13.46□□□□□ -0.25
MARK3-209ENST00000555235 GMPPAQ96IJ6 420 aaPredicted RBP13.46□□□□□ -0.25
MARK3-209ENST00000555235 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.46□□□□□ -0.25
MARK3-209ENST00000555235 OR5B21A6NL26 309 aa13.46□□□□□ -0.26
MARK3-209ENST00000555235 LRRC30A6NM36 301 aa13.46□□□□□ -0.26
MARK3-209ENST00000555235 NDUFB4O95168 129 aa13.46□□□□□ -0.26
MARK3-209ENST00000555235 KITLGP21583 273 aa13.46□□□□□ -0.26
MARK3-209ENST00000555235 PLA2G5P39877 138 aa13.46□□□□□ -0.26
MARK3-209ENST00000555235 ZNF488Q96MN9 340 aa13.46□□□□□ -0.26
MARK3-209ENST00000555235 OR2J1Q9GZK6 312 aa13.46□□□□□ -0.26
MARK3-209ENST00000555235 DOCK11Q5JSL3 2073 aa13.45□□□□□ -0.26
MARK3-209ENST00000555235 IL6RP08887 468 aaPredicted RBP13.45□□□□□ -0.26
MARK3-209ENST00000555235 C9orf135Q5VTT2 229 aa13.45□□□□□ -0.26
MARK3-209ENST00000555235 PMS2CLQ68D20 193 aa13.45□□□□□ -0.26
MARK3-209ENST00000555235 TCF23Q7RTU1 214 aa13.45□□□□□ -0.26
MARK3-209ENST00000555235 OR5AU1Q8NGC0 362 aa13.45□□□□□ -0.26
MARK3-209ENST00000555235 DTD1Q8TEA8 209 aa13.45□□□□□ -0.26
MARK3-209ENST00000555235 PATZ1Q9HBE1 687 aaKnown RBP13.45□□□□□ -0.26
MARK3-209ENST00000555235 CLN8Q9UBY8 286 aa13.45□□□□□ -0.26
MARK3-209ENST00000555235 TRAPPC2LQ9UL33 140 aa13.45□□□□□ -0.26
MARK3-209ENST00000555235 GRIFINA4D1Z8 144 aa13.44□□□□□ -0.26
MARK3-209ENST00000555235 ZNF503-AS2A6NEH8 195 aa13.44□□□□□ -0.26
MARK3-209ENST00000555235 CRYAAP02489 173 aa13.44□□□□□ -0.26
MARK3-209ENST00000555235 P0C879 139 aa13.44□□□□□ -0.26
MARK3-209ENST00000555235 CRISP2P16562 243 aa13.44□□□□□ -0.26
MARK3-209ENST00000555235 OTX2P32243 289 aa13.44□□□□□ -0.26
MARK3-209ENST00000555235 ATP5G3P48201 142 aa13.44□□□□□ -0.26
MARK3-209ENST00000555235 GNG3P63215 75 aa13.44□□□□□ -0.26
MARK3-209ENST00000555235 ZBTB34Q8NCN2 500 aa13.44□□□□□ -0.26
MARK3-209ENST00000555235 OR1L1Q8NH94 360 aa13.44□□□□□ -0.26
MARK3-209ENST00000555235 PKIBQ9C010 78 aa13.44□□□□□ -0.26
MARK3-209ENST00000555235 AURKAIP1Q9NWT8 199 aaPredicted RBP13.44□□□□□ -0.26
MARK3-209ENST00000555235 PAM16Q9Y3D7 125 aa13.44□□□□□ -0.26
MARK3-209ENST00000555235 MPC1Q9Y5U8 109 aa13.44□□□□□ -0.26
MARK3-209ENST00000555235 A0A1W2PR80 420 aa13.44□□□□□ -0.26
MARK3-209ENST00000555235 LNP1A1A4G5 178 aa13.44□□□□□ -0.26
MARK3-209ENST00000555235 ANKRD30BLA7E2S9 258 aa13.44□□□□□ -0.26
MARK3-209ENST00000555235 FOXG1P55316 489 aaPredicted RBP13.44□□□□□ -0.26
MARK3-209ENST00000555235 COL5A1-AS1Q5SY13 56 aa13.44□□□□□ -0.26
MARK3-209ENST00000555235 HSPB9Q9BQS6 159 aa13.44□□□□□ -0.26
MARK3-209ENST00000555235 TP53TG3Q9ULZ0 132 aa13.44□□□□□ -0.26
MARK3-209ENST00000555235 YLPM1P49750 1951 aaKnown RBP13.44□□□□□ -0.26
MARK3-209ENST00000555235 ODAMA1E959 279 aa13.43□□□□□ -0.26
MARK3-209ENST00000555235 RBFOX2O43251 390 aaKnown RBP eCLIP13.43□□□□□ -0.26
MARK3-209ENST00000555235 NGFP01138 241 aa13.43□□□□□ -0.26
MARK3-209ENST00000555235 EGR1P18146 543 aa13.43□□□□□ -0.26
MARK3-209ENST00000555235 ZNF497Q6ZNH5 498 aa13.43□□□□□ -0.26
MARK3-209ENST00000555235 DERL1Q9BUN8 251 aa13.43□□□□□ -0.26
MARK3-209ENST00000555235 C19orf67A6NJJ6 358 aa13.43□□□□□ -0.26
MARK3-209ENST00000555235 ZG16O60844 167 aa13.43□□□□□ -0.26
MARK3-209ENST00000555235 G6PCP35575 357 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms