RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 DUS4LO95620 317 aaKnown RBP8.72□□□□□ -1.01
TDP1-211ENST00000555178 ARG1P05089 322 aa8.72□□□□□ -1.01
TDP1-211ENST00000555178 DUTP33316 252 aaKnown RBP8.72□□□□□ -1.01
TDP1-211ENST00000555178 HLA-DRB5Q30154 266 aa8.72□□□□□ -1.01
TDP1-211ENST00000555178 C11orf91Q3C1V1 193 aa8.72□□□□□ -1.01
TDP1-211ENST00000555178 CYB5R2Q6BCY4 276 aa8.72□□□□□ -1.01
TDP1-211ENST00000555178 C12orf45Q8N5I9 185 aaPredicted RBP8.72□□□□□ -1.01
TDP1-211ENST00000555178 ZNF596Q8TC21 504 aa8.72□□□□□ -1.01
TDP1-211ENST00000555178 TCTEX1D2Q8WW35 142 aa8.72□□□□□ -1.01
TDP1-211ENST00000555178 AKR1E2Q96JD6 320 aa8.72□□□□□ -1.01
TDP1-211ENST00000555178 MRPL20Q9BYC9 149 aaKnown RBP8.72□□□□□ -1.01
TDP1-211ENST00000555178 MED28Q9H204 178 aa8.72□□□□□ -1.01
TDP1-211ENST00000555178 AUP1Q9Y679 476 aa8.72□□□□□ -1.01
TDP1-211ENST00000555178 TRAV20A0A0B4J274 112 aa8.72□□□□□ -1.01
TDP1-211ENST00000555178 TRAV40A0A0B4J280 105 aa8.72□□□□□ -1.01
TDP1-211ENST00000555178 GOSR2O14653 212 aa8.72□□□□□ -1.01
TDP1-211ENST00000555178 TOR1AO14656 332 aa8.72□□□□□ -1.01
TDP1-211ENST00000555178 LY6G6DO95868 133 aa8.72□□□□□ -1.01
TDP1-211ENST00000555178 IGKV1-39P01597 117 aa8.72□□□□□ -1.01
TDP1-211ENST00000555178 IGKV1D-39P04432 117 aa8.72□□□□□ -1.01
TDP1-211ENST00000555178 GZMKP49863 264 aa8.72□□□□□ -1.01
TDP1-211ENST00000555178 CD83Q01151 205 aa8.72□□□□□ -1.01
TDP1-211ENST00000555178 ZNF383Q8NA42 475 aa8.72□□□□□ -1.01
TDP1-211ENST00000555178 C22orf15Q8WYQ4 148 aa8.72□□□□□ -1.01
TDP1-211ENST00000555178 ST6GALNAC6Q969X2 333 aa8.72□□□□□ -1.01
TDP1-211ENST00000555178 GALNT14Q96FL9 552 aa8.72□□□□□ -1.01
TDP1-211ENST00000555178 PLXNB1O43157 2135 aa8.71□□□□□ -1.01
TDP1-211ENST00000555178 ODF3BA8MYP8 253 aa8.71□□□□□ -1.02
TDP1-211ENST00000555178 RPA2P15927 270 aa8.71□□□□□ -1.02
TDP1-211ENST00000555178 ZNF816Q0VGE8 651 aaPredicted RBP8.71□□□□□ -1.02
TDP1-211ENST00000555178 ZNF585BQ52M93 769 aa8.71□□□□□ -1.02
TDP1-211ENST00000555178 C1orf122Q6ZSJ8 110 aa8.71□□□□□ -1.02
TDP1-211ENST00000555178 ZNF833PQ6ZTB9 187 aa8.71□□□□□ -1.02
TDP1-211ENST00000555178 BCL6BQ8N143 479 aaPredicted RBP8.71□□□□□ -1.02
TDP1-211ENST00000555178 LINC00311Q8N616 119 aa8.71□□□□□ -1.02
TDP1-211ENST00000555178 OR13D1Q8NGV5 346 aa8.71□□□□□ -1.02
TDP1-211ENST00000555178 C18orf12Q96KH6 178 aa8.71□□□□□ -1.02
TDP1-211ENST00000555178 PHB2Q99623 299 aa8.71□□□□□ -1.02
TDP1-211ENST00000555178 NEURL2Q9BR09 285 aa8.71□□□□□ -1.02
TDP1-211ENST00000555178 TMUB1Q9BVT8 246 aa8.71□□□□□ -1.02
TDP1-211ENST00000555178 UNKLQ9H9P5 680 aaKnown RBP8.71□□□□□ -1.02
TDP1-211ENST00000555178 PIPOXQ9P0Z9 390 aa8.71□□□□□ -1.02
TDP1-211ENST00000555178 MGAT4CQ9UBM8 478 aa8.71□□□□□ -1.02
TDP1-211ENST00000555178 NIPBLQ6KC79 2804 aaeCLIP8.71□□□□□ -1.02
TDP1-211ENST00000555178 FN1P02751 2386 aaKnown RBP8.71□□□□□ -1.02
TDP1-211ENST00000555178 H0Y980 276 aa8.7□□□□□ -1.02
TDP1-211ENST00000555178 BUB1B-PAK6H3BSN5 160 aa8.7□□□□□ -1.02
TDP1-211ENST00000555178 HOXB5P09067 269 aa8.7□□□□□ -1.02
TDP1-211ENST00000555178 SULT1A3P0DMM9 295 aa8.7□□□□□ -1.02
TDP1-211ENST00000555178 SULT1A4P0DMN0 295 aa8.7□□□□□ -1.02
TDP1-211ENST00000555178 CT45A6P0DMU7 189 aa8.7□□□□□ -1.02
TDP1-211ENST00000555178 CT45A5P0DMU8 189 aa8.7□□□□□ -1.02
TDP1-211ENST00000555178 CT45A7P0DMV0 189 aa8.7□□□□□ -1.02
TDP1-211ENST00000555178 H2BFSP57053 126 aa8.7□□□□□ -1.02
TDP1-211ENST00000555178 SPNS3Q6ZMD2 512 aa8.7□□□□□ -1.02
TDP1-211ENST00000555178 LYZL2Q7Z4W2 148 aa8.7□□□□□ -1.02
TDP1-211ENST00000555178 C8orf31Q8N9H6 132 aa8.7□□□□□ -1.02
TDP1-211ENST00000555178 OR11H6Q8NGC7 330 aa8.7□□□□□ -1.02
TDP1-211ENST00000555178 FYTTD1Q96QD9 318 aaKnown RBP8.7□□□□□ -1.02
TDP1-211ENST00000555178 TMEM222Q9H0R3 208 aa8.7□□□□□ -1.02
TDP1-211ENST00000555178 IGHV3-72A0A0B4J1Y9 119 aa8.7□□□□□ -1.02
TDP1-211ENST00000555178 MDFIC2A0A1B0GVS7 189 aa8.7□□□□□ -1.02
TDP1-211ENST00000555178 HMX3A6NHT5 357 aa8.7□□□□□ -1.02
TDP1-211ENST00000555178 DBX1A6NMT0 343 aa8.7□□□□□ -1.02
TDP1-211ENST00000555178 SMLR1H3BR10 107 aa8.7□□□□□ -1.02
TDP1-211ENST00000555178 FCGR3BO75015 233 aa8.7□□□□□ -1.02
TDP1-211ENST00000555178 UCP1P25874 307 aa8.7□□□□□ -1.02
TDP1-211ENST00000555178 IZUMO4Q1ZYL8 232 aa8.7□□□□□ -1.02
TDP1-211ENST00000555178 TMEM268Q5VZI3 342 aa8.7□□□□□ -1.02
TDP1-211ENST00000555178 LIAT1Q6ZQX7 453 aa8.7□□□□□ -1.02
TDP1-211ENST00000555178 SPAG16Q8N0X2 631 aa8.7□□□□□ -1.02
TDP1-211ENST00000555178 SLC35G3Q8N808 338 aa8.7□□□□□ -1.02
TDP1-211ENST00000555178 ZBTB34Q8NCN2 500 aa8.7□□□□□ -1.02
TDP1-211ENST00000555178 BEND2Q8NDZ0 799 aa8.7□□□□□ -1.02
TDP1-211ENST00000555178 DDB2Q92466 427 aa8.7□□□□□ -1.02
TDP1-211ENST00000555178 CHIAQ9BZP6 476 aa8.7□□□□□ -1.02
TDP1-211ENST00000555178 RANGRFQ9HD47 186 aaPredicted RBP8.7□□□□□ -1.02
TDP1-211ENST00000555178 LIN7CQ9NUP9 197 aaKnown RBP8.7□□□□□ -1.02
TDP1-211ENST00000555178 KCNIP3Q9Y2W7 256 aa8.7□□□□□ -1.02
TDP1-211ENST00000555178 HILPDAQ9Y5L2 63 aa8.7□□□□□ -1.02
TDP1-211ENST00000555178 A0A0G2JRQ6 117 aa8.69□□□□□ -1.02
TDP1-211ENST00000555178 FAM25EA8MYX2 175 aa8.69□□□□□ -1.02
TDP1-211ENST00000555178 LY6LH3BQJ8 138 aa8.69□□□□□ -1.02
TDP1-211ENST00000555178 SLC22A5O76082 557 aa8.69□□□□□ -1.02
TDP1-211ENST00000555178 S1PR2O95136 353 aa8.69□□□□□ -1.02
TDP1-211ENST00000555178 CD24P25063 80 aa8.69□□□□□ -1.02
TDP1-211ENST00000555178 S100GP29377 79 aa8.69□□□□□ -1.02
TDP1-211ENST00000555178 ZNF137PP52743 207 aa8.69□□□□□ -1.02
TDP1-211ENST00000555178 C11orf88Q6PI97 169 aa8.69□□□□□ -1.02
TDP1-211ENST00000555178 S1PR3Q99500 378 aa8.69□□□□□ -1.02
TDP1-211ENST00000555178 HSD17B10Q99714 261 aaKnown RBP8.69□□□□□ -1.02
TDP1-211ENST00000555178 HEXA-AS1Q9H8Q6 139 aa8.69□□□□□ -1.02
TDP1-211ENST00000555178 YAE1D1Q9NRH1 226 aa8.69□□□□□ -1.02
TDP1-211ENST00000555178 CD5LO43866 347 aa8.69□□□□□ -1.02
TDP1-211ENST00000555178 PFDN1O60925 122 aa8.69□□□□□ -1.02
TDP1-211ENST00000555178 FSHBP01225 129 aa8.69□□□□□ -1.02
TDP1-211ENST00000555178 IGKV1-16P04430 117 aa8.69□□□□□ -1.02
TDP1-211ENST00000555178 ANXA3P12429 323 aa8.69□□□□□ -1.02
TDP1-211ENST00000555178 SAA4P35542 130 aa8.69□□□□□ -1.02
TDP1-211ENST00000555178 RAB13P51153 203 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms