RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 OR51H1Q8NH63 302 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 RFESDQ8TAC1 157 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 C19orf12Q9NSK7 152 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 PLA2G2EQ9NZK7 142 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 LINC00312Q9Y6C7 94 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 POLEQ07864 2286 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 IGHV1-69-2A0A0G2JMI3 117 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 MEX3AA1L020 520 aaKnown RBP7.33□□□□□ -1.24
TDP1-210ENST00000554976 C5orf52A6NGY3 159 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 C17orf98A8MV24 154 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 E5RGE8 158 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 IRF2P14316 349 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 DUTP33316 252 aaKnown RBP7.33□□□□□ -1.24
TDP1-210ENST00000554976 MEF2CQ06413 473 aaPredicted RBP7.33□□□□□ -1.24
TDP1-210ENST00000554976 CT45A1Q5HYN5 189 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 C11orf42Q8N5U0 333 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 TCTEX1D1Q8N7M0 179 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 INO80EQ8NBZ0 244 aaPredicted RBP7.33□□□□□ -1.24
TDP1-210ENST00000554976 CT45A3Q8NHU0 189 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 WFDC1Q9HC57 220 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 TAS2R3Q9NYW6 316 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 NSG2Q9Y328 171 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 KANTRA0A1W2PQU2 76 aa7.32□□□□□ -1.24
TDP1-210ENST00000554976 HSPA12AO43301 675 aa7.32□□□□□ -1.24
TDP1-210ENST00000554976 FGF16O43320 207 aa7.32□□□□□ -1.24
TDP1-210ENST00000554976 FOLR2P14207 255 aa7.32□□□□□ -1.24
TDP1-210ENST00000554976 MMP9P14780 707 aa7.32□□□□□ -1.24
TDP1-210ENST00000554976 LINC00205P59089 165 aa7.32□□□□□ -1.24
TDP1-210ENST00000554976 S100A10P60903 97 aa7.32□□□□□ -1.24
TDP1-210ENST00000554976 CXorf66Q5JRM2 361 aaPredicted RBP7.32□□□□□ -1.24
TDP1-210ENST00000554976 ALKAL2Q6UX46 152 aa7.32□□□□□ -1.24
TDP1-210ENST00000554976 PDZD9Q8IXQ8 264 aa7.32□□□□□ -1.24
TDP1-210ENST00000554976 RNASE11Q8TAA1 199 aaKnown RBP7.32□□□□□ -1.24
TDP1-210ENST00000554976 PLEKHA2Q9HB19 425 aa7.32□□□□□ -1.24
TDP1-210ENST00000554976 IDI2-AS1Q9NZ38 188 aa7.32□□□□□ -1.24
TDP1-210ENST00000554976 RNF150Q9ULK6 438 aa7.32□□□□□ -1.24
TDP1-210ENST00000554976 LSM5Q9Y4Y9 91 aaKnown RBP7.32□□□□□ -1.24
TDP1-210ENST00000554976 PIEZO1Q92508 2521 aa7.32□□□□□ -1.24
TDP1-210ENST00000554976 A0A087X0M5 115 aa7.32□□□□□ -1.24
TDP1-210ENST00000554976 A0A1B0GX30 115 aa7.32□□□□□ -1.24
TDP1-210ENST00000554976 RNF212BA8MTL3 300 aa7.32□□□□□ -1.24
TDP1-210ENST00000554976 VSTM5A8MXK1 200 aa7.32□□□□□ -1.24
TDP1-210ENST00000554976 GPR137BO60478 399 aa7.32□□□□□ -1.24
TDP1-210ENST00000554976 SPDEFO95238 335 aa7.32□□□□□ -1.24
TDP1-210ENST00000554976 FAM157CP0CG43 387 aa7.32□□□□□ -1.24
TDP1-210ENST00000554976 COL8A2P25067 703 aa7.32□□□□□ -1.24
TDP1-210ENST00000554976 RPL12P30050 165 aaKnown RBP7.32□□□□□ -1.24
TDP1-210ENST00000554976 LBHQ53QV2 105 aaPredicted RBP7.32□□□□□ -1.24
TDP1-210ENST00000554976 FAM74A1Q5RGS3 127 aa7.32□□□□□ -1.24
TDP1-210ENST00000554976 BTNL3Q6UXE8 466 aa7.32□□□□□ -1.24
TDP1-210ENST00000554976 C1orf87Q8N0U7 546 aa7.32□□□□□ -1.24
TDP1-210ENST00000554976 DEFB108BQ8NET1 73 aa7.32□□□□□ -1.24
TDP1-210ENST00000554976 IGFBPL1Q8WX77 278 aa7.32□□□□□ -1.24
TDP1-210ENST00000554976 PLEKHF2Q9H8W4 249 aa7.32□□□□□ -1.24
TDP1-210ENST00000554976 SLC25A10Q9UBX3 287 aaPredicted RBP7.32□□□□□ -1.24
TDP1-210ENST00000554976 KCNS2Q9ULS6 477 aa7.32□□□□□ -1.24
TDP1-210ENST00000554976 PLCE1Q9P212 2302 aa7.31□□□□□ -1.24
TDP1-210ENST00000554976 NKX6-3A6NJ46 265 aa7.31□□□□□ -1.24
TDP1-210ENST00000554976 ST8SIA3O43173 380 aa7.31□□□□□ -1.24
TDP1-210ENST00000554976 ZG16O60844 167 aa7.31□□□□□ -1.24
TDP1-210ENST00000554976 EDDM3BP56851 147 aa7.31□□□□□ -1.24
TDP1-210ENST00000554976 TMEM200BQ69YZ2 307 aa7.31□□□□□ -1.24
TDP1-210ENST00000554976 SLC25A48Q6ZT89 311 aaKnown RBP7.31□□□□□ -1.24
TDP1-210ENST00000554976 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.31□□□□□ -1.24
TDP1-210ENST00000554976 HSD17B10Q99714 261 aaKnown RBP7.31□□□□□ -1.24
TDP1-210ENST00000554976 CBLN4Q9NTU7 201 aa7.31□□□□□ -1.24
TDP1-210ENST00000554976 LYRM2Q9NU23 88 aaPredicted RBP7.31□□□□□ -1.24
TDP1-210ENST00000554976 ZFP57Q9NU63 452 aa7.31□□□□□ -1.24
TDP1-210ENST00000554976 RPUSD1Q9UJJ7 312 aaKnown RBP7.31□□□□□ -1.24
TDP1-210ENST00000554976 PSG11Q9UQ72 335 aa7.31□□□□□ -1.24
TDP1-210ENST00000554976 TRGV10A0A0A0MS01 117 aa7.31□□□□□ -1.24
TDP1-210ENST00000554976 PIGBOS1A0A0B4J2F0 54 aa7.31□□□□□ -1.24
TDP1-210ENST00000554976 IGSF23A1L1A6 192 aa7.31□□□□□ -1.24
TDP1-210ENST00000554976 TAAR5O14804 337 aa7.31□□□□□ -1.24
TDP1-210ENST00000554976 TMPRSS2O15393 492 aa7.31□□□□□ -1.24
TDP1-210ENST00000554976 GAPDHP04406 335 aaKnown RBP7.31□□□□□ -1.24
TDP1-210ENST00000554976 SOD3P08294 240 aa7.31□□□□□ -1.24
TDP1-210ENST00000554976 OMGP23515 440 aa7.31□□□□□ -1.24
TDP1-210ENST00000554976 RAB5BP61020 215 aa7.31□□□□□ -1.24
TDP1-210ENST00000554976 SMCO1Q147U7 214 aa7.31□□□□□ -1.24
TDP1-210ENST00000554976 PDLIM3Q53GG5 364 aaPredicted RBP7.31□□□□□ -1.24
TDP1-210ENST00000554976 GPR157Q5UAW9 335 aa7.31□□□□□ -1.24
TDP1-210ENST00000554976 C8orf31Q8N9H6 132 aa7.31□□□□□ -1.24
TDP1-210ENST00000554976 C2CD4CQ8TF44 421 aa7.31□□□□□ -1.24
TDP1-210ENST00000554976 NINJ1Q92982 152 aa7.31□□□□□ -1.24
TDP1-210ENST00000554976 SPIN2AQ99865 258 aa7.31□□□□□ -1.24
TDP1-210ENST00000554976 SPIN2BQ9BPZ2 258 aa7.31□□□□□ -1.24
TDP1-210ENST00000554976 SLC25A32Q9H2D1 315 aa7.31□□□□□ -1.24
TDP1-210ENST00000554976 DYNLRB1Q9NP97 96 aa7.31□□□□□ -1.24
TDP1-210ENST00000554976 MMP24Q9Y5R2 645 aa7.31□□□□□ -1.24
TDP1-210ENST00000554976 S1PR2O95136 353 aa7.3□□□□□ -1.24
TDP1-210ENST00000554976 CRYBA1P05813 215 aa7.3□□□□□ -1.24
TDP1-210ENST00000554976 RAB4AP20338 218 aa7.3□□□□□ -1.24
TDP1-210ENST00000554976 S100GP29377 79 aa7.3□□□□□ -1.24
TDP1-210ENST00000554976 LPAR6P43657 344 aa7.3□□□□□ -1.24
TDP1-210ENST00000554976 SNRPEP62304 92 aaKnown RBP7.3□□□□□ -1.24
TDP1-210ENST00000554976 MRPS11P82912 194 aaKnown RBP7.3□□□□□ -1.24
TDP1-210ENST00000554976 GUCA2BQ16661 112 aa7.3□□□□□ -1.24
TDP1-210ENST00000554976 IZUMO4Q1ZYL8 232 aa7.3□□□□□ -1.24
TDP1-210ENST00000554976 C9orf152Q5JTZ5 239 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms