RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 SPSB1Q96BD6 273 aa13.26□□□□□ -0.29
SYNE3-203ENST00000554873 KCNS1Q96KK3 526 aa13.26□□□□□ -0.29
SYNE3-203ENST00000554873 OR4C12Q96R67 309 aa13.26□□□□□ -0.29
SYNE3-203ENST00000554873 CHODLQ9H9P2 273 aa13.26□□□□□ -0.29
SYNE3-203ENST00000554873 GNB4Q9HAV0 340 aa13.26□□□□□ -0.29
SYNE3-203ENST00000554873 PLEK2Q9NYT0 353 aa13.26□□□□□ -0.29
SYNE3-203ENST00000554873 SDK2Q58EX2 2172 aa13.26□□□□□ -0.29
SYNE3-203ENST00000554873 GAGE12BA1L429 117 aa13.26□□□□□ -0.29
SYNE3-203ENST00000554873 KIAA1324LA8MWY0 1029 aaPredicted RBP13.26□□□□□ -0.29
SYNE3-203ENST00000554873 FCN1O00602 326 aa13.26□□□□□ -0.29
SYNE3-203ENST00000554873 TAX1BP3O14907 124 aa13.26□□□□□ -0.29
SYNE3-203ENST00000554873 ZNF90Q03938 601 aa13.26□□□□□ -0.29
SYNE3-203ENST00000554873 OR2AE1Q8NHA4 323 aa13.26□□□□□ -0.29
SYNE3-203ENST00000554873 ZNF837Q96EG3 531 aaPredicted RBP13.26□□□□□ -0.29
SYNE3-203ENST00000554873 SF3B5Q9BWJ5 86 aaKnown RBP13.26□□□□□ -0.29
SYNE3-203ENST00000554873 SLC7A10Q9NS82 523 aa13.26□□□□□ -0.29
SYNE3-203ENST00000554873 PSENENQ9NZ42 101 aa13.26□□□□□ -0.29
SYNE3-203ENST00000554873 IGKV1-27A0A075B6S5 117 aa13.25□□□□□ -0.29
SYNE3-203ENST00000554873 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.25□□□□□ -0.29
SYNE3-203ENST00000554873 DHHO43323 396 aa13.25□□□□□ -0.29
SYNE3-203ENST00000554873 SCRG1O75711 98 aa13.25□□□□□ -0.29
SYNE3-203ENST00000554873 PRSS12P56730 875 aa13.25□□□□□ -0.29
SYNE3-203ENST00000554873 STUMQ69YW2 141 aa13.25□□□□□ -0.29
SYNE3-203ENST00000554873 ZNF818PQ6ZRF7 136 aa13.25□□□□□ -0.29
SYNE3-203ENST00000554873 GAPTQ8N292 157 aa13.25□□□□□ -0.29
SYNE3-203ENST00000554873 OR10V1Q8NGI7 309 aa13.25□□□□□ -0.29
SYNE3-203ENST00000554873 C10orf35Q96D05 121 aa13.25□□□□□ -0.29
SYNE3-203ENST00000554873 UCN2Q96RP3 112 aa13.25□□□□□ -0.29
SYNE3-203ENST00000554873 DEFB126Q9BYW3 111 aa13.25□□□□□ -0.29
SYNE3-203ENST00000554873 CHCHD2Q9Y6H1 151 aaPredicted RBP13.25□□□□□ -0.29
SYNE3-203ENST00000554873 C17orf112F2Z3M2 114 aa13.25□□□□□ -0.29
SYNE3-203ENST00000554873 RBFOX2O43251 390 aaKnown RBP eCLIP13.25□□□□□ -0.29
SYNE3-203ENST00000554873 PDE6DO43924 150 aa13.25□□□□□ -0.29
SYNE3-203ENST00000554873 S1PR2O95136 353 aa13.25□□□□□ -0.29
SYNE3-203ENST00000554873 SLC25A6P12236 298 aa13.25□□□□□ -0.29
SYNE3-203ENST00000554873 CDC34P49427 236 aaPredicted RBP13.25□□□□□ -0.29
SYNE3-203ENST00000554873 PSG4Q00888 419 aa13.25□□□□□ -0.29
SYNE3-203ENST00000554873 FOXL2NBQ6ZUU3 175 aa13.25□□□□□ -0.29
SYNE3-203ENST00000554873 PMCHP20382 165 aa13.24□□□□□ -0.29
SYNE3-203ENST00000554873 GNB1P62873 340 aa13.24□□□□□ -0.29
SYNE3-203ENST00000554873 FAM71F2Q6NXP2 309 aa13.24□□□□□ -0.29
SYNE3-203ENST00000554873 ACSM6Q6P461 480 aa13.24□□□□□ -0.29
SYNE3-203ENST00000554873 C19orf35Q6ZS72 473 aa13.24□□□□□ -0.29
SYNE3-203ENST00000554873 UBE2L5PA0A1B0GUS4 154 aa13.24□□□□□ -0.29
SYNE3-203ENST00000554873 A0A1W2PS18 150 aa13.24□□□□□ -0.29
SYNE3-203ENST00000554873 ODAMA1E959 279 aa13.24□□□□□ -0.29
SYNE3-203ENST00000554873 FKBP2P26885 142 aaKnown RBP13.24□□□□□ -0.29
SYNE3-203ENST00000554873 OR10J3Q5JRS4 329 aa13.24□□□□□ -0.29
SYNE3-203ENST00000554873 OR10G9Q8NGN4 311 aa13.24□□□□□ -0.29
SYNE3-203ENST00000554873 OR10G7Q8NGN6 311 aa13.24□□□□□ -0.29
SYNE3-203ENST00000554873 GPHA2Q96T91 129 aa13.24□□□□□ -0.29
SYNE3-203ENST00000554873 AKIRIN1Q9H9L7 192 aaPredicted RBP13.24□□□□□ -0.29
SYNE3-203ENST00000554873 A0A0G2JRQ6 117 aa13.23□□□□□ -0.29
SYNE3-203ENST00000554873 H0Y980 276 aa13.23□□□□□ -0.29
SYNE3-203ENST00000554873 SYNGR2O43760 224 aa13.23□□□□□ -0.29
SYNE3-203ENST00000554873 GFRA1P56159 465 aa13.23□□□□□ -0.29
SYNE3-203ENST00000554873 AMMECR1LQ6DCA0 310 aa13.23□□□□□ -0.29
SYNE3-203ENST00000554873 ZNF114Q8NC26 417 aa13.23□□□□□ -0.29
SYNE3-203ENST00000554873 OR10G8Q8NGN5 311 aa13.23□□□□□ -0.29
SYNE3-203ENST00000554873 SPTSSAQ969W0 71 aa13.23□□□□□ -0.29
SYNE3-203ENST00000554873 TRBV9A0A0B4J1U6 114 aa13.23□□□□□ -0.29
SYNE3-203ENST00000554873 RAMP3O60896 148 aa13.23□□□□□ -0.29
SYNE3-203ENST00000554873 ZNF324O75467 553 aaPredicted RBP13.23□□□□□ -0.29
SYNE3-203ENST00000554873 IAPPP10997 89 aa13.23□□□□□ -0.29
SYNE3-203ENST00000554873 CLDN15P56746 228 aa13.23□□□□□ -0.29
SYNE3-203ENST00000554873 NHLH1Q02575 133 aa13.23□□□□□ -0.29
SYNE3-203ENST00000554873 TMEM211Q6ICI0 200 aa13.23□□□□□ -0.29
SYNE3-203ENST00000554873 TCF24Q7RTU0 167 aa13.23□□□□□ -0.29
SYNE3-203ENST00000554873 ATOH7Q8N100 152 aa13.23□□□□□ -0.29
SYNE3-203ENST00000554873 TRAV9-2A0A087WT02 112 aa13.22□□□□□ -0.29
SYNE3-203ENST00000554873 NPIPA3F8WFD2 350 aa13.22□□□□□ -0.29
SYNE3-203ENST00000554873 DEGS1O15121 323 aa13.22□□□□□ -0.29
SYNE3-203ENST00000554873 PIGYQ3MUY2 71 aa13.22□□□□□ -0.29
SYNE3-203ENST00000554873 KRTCAP3Q53RY4 240 aa13.22□□□□□ -0.29
SYNE3-203ENST00000554873 Q6ZPA2 131 aa13.22□□□□□ -0.29
SYNE3-203ENST00000554873 OR4S2Q8NH73 311 aa13.22□□□□□ -0.29
SYNE3-203ENST00000554873 IL36BQ9NZH7 164 aa13.22□□□□□ -0.29
SYNE3-203ENST00000554873 OR2T8A6NH00 312 aa13.22□□□□□ -0.29
SYNE3-203ENST00000554873 SNURFLB1AK76 121 aa13.22□□□□□ -0.29
SYNE3-203ENST00000554873 NDUFB4O95168 129 aa13.22□□□□□ -0.29
SYNE3-203ENST00000554873 NAPSAO96009 420 aa13.22□□□□□ -0.29
SYNE3-203ENST00000554873 EGR1P18146 543 aa13.22□□□□□ -0.29
SYNE3-203ENST00000554873 TIMP3P35625 211 aa13.22□□□□□ -0.29
SYNE3-203ENST00000554873 PLA2G5P39877 138 aa13.22□□□□□ -0.29
SYNE3-203ENST00000554873 IER3P46695 156 aa13.22□□□□□ -0.29
SYNE3-203ENST00000554873 ZNF83P51522 516 aa13.22□□□□□ -0.29
SYNE3-203ENST00000554873 PRSS57Q6UWY2 283 aa13.22□□□□□ -0.29
SYNE3-203ENST00000554873 OR4P4Q8NGL7 312 aa13.22□□□□□ -0.29
SYNE3-203ENST00000554873 PIGBOS1A0A0B4J2F0 54 aa13.21□□□□□ -0.29
SYNE3-203ENST00000554873 IGKV1-12A0A0C4DH73 117 aa13.21□□□□□ -0.29
SYNE3-203ENST00000554873 SIRPB1O00241 398 aa13.21□□□□□ -0.29
SYNE3-203ENST00000554873 IGKV1D-12P01611 117 aa13.21□□□□□ -0.29
SYNE3-203ENST00000554873 CELA2AP08217 269 aa13.21□□□□□ -0.29
SYNE3-203ENST00000554873 PDCD1Q15116 288 aa13.21□□□□□ -0.29
SYNE3-203ENST00000554873 BORCS7Q96B45 105 aa13.21□□□□□ -0.29
SYNE3-203ENST00000554873 PGPEP1LA6NFU8 196 aa13.21□□□□□ -0.29
SYNE3-203ENST00000554873 CA2P00918 260 aa13.21□□□□□ -0.29
SYNE3-203ENST00000554873 CRYGSP22914 178 aa13.21□□□□□ -0.29
SYNE3-203ENST00000554873 FAM27BQ5VT28 67 aa13.21□□□□□ -0.29
SYNE3-203ENST00000554873 DERL1Q9BUN8 251 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms