RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 WNT9BO14905 357 aa8.02□□□□□ -1.13
SYNE2-213ENST00000554805 ZG16O60844 167 aa8.02□□□□□ -1.13
SYNE2-213ENST00000554805 LYZL6O75951 148 aa8.02□□□□□ -1.13
SYNE2-213ENST00000554805 S1PR2O95136 353 aa8.02□□□□□ -1.13
SYNE2-213ENST00000554805 IFNA10P01566 189 aa8.02□□□□□ -1.13
SYNE2-213ENST00000554805 IGKV1D-33P01593 117 aa8.02□□□□□ -1.13
SYNE2-213ENST00000554805 IGKV1-33P01594 117 aa8.02□□□□□ -1.13
SYNE2-213ENST00000554805 COX5AP20674 150 aa8.02□□□□□ -1.13
SYNE2-213ENST00000554805 HOXA4Q00056 320 aaPredicted RBP8.02□□□□□ -1.13
SYNE2-213ENST00000554805 DHRS13Q6UX07 377 aa8.02□□□□□ -1.13
SYNE2-213ENST00000554805 ZNF497Q6ZNH5 498 aa8.02□□□□□ -1.13
SYNE2-213ENST00000554805 Q8IYB0 196 aa8.02□□□□□ -1.13
SYNE2-213ENST00000554805 SLC25A40Q8TBP6 338 aa8.02□□□□□ -1.13
SYNE2-213ENST00000554805 DTD1Q8TEA8 209 aa8.02□□□□□ -1.13
SYNE2-213ENST00000554805 ZDHHC16Q969W1 377 aa8.02□□□□□ -1.13
SYNE2-213ENST00000554805 PARLQ9H300 379 aa8.02□□□□□ -1.13
SYNE2-213ENST00000554805 FOXJ2Q9P0K8 574 aa8.02□□□□□ -1.13
SYNE2-213ENST00000554805 MED13Q9UHV7 2174 aa8.01□□□□□ -1.13
SYNE2-213ENST00000554805 A0A087X0M5 115 aa8.01□□□□□ -1.13
SYNE2-213ENST00000554805 CTXND1A0A1B0GTU2 59 aa8.01□□□□□ -1.13
SYNE2-213ENST00000554805 A0A1B0GX30 115 aa8.01□□□□□ -1.13
SYNE2-213ENST00000554805 GPX4P36969 197 aaPredicted RBP8.01□□□□□ -1.13
SYNE2-213ENST00000554805 RND2P52198 227 aa8.01□□□□□ -1.13
SYNE2-213ENST00000554805 CD81P60033 236 aa8.01□□□□□ -1.13
SYNE2-213ENST00000554805 COL10A1Q03692 680 aa8.01□□□□□ -1.13
SYNE2-213ENST00000554805 TFF3Q07654 80 aa8.01□□□□□ -1.13
SYNE2-213ENST00000554805 EDDM3AQ14507 147 aa8.01□□□□□ -1.13
SYNE2-213ENST00000554805 DCAF10Q5QP82 559 aa8.01□□□□□ -1.13
SYNE2-213ENST00000554805 FBXW9Q5XUX1 488 aa8.01□□□□□ -1.13
SYNE2-213ENST00000554805 MED12LQ86YW9 2145 aa8.01□□□□□ -1.13
SYNE2-213ENST00000554805 HIST1H2BLQ99880 126 aa8.01□□□□□ -1.13
SYNE2-213ENST00000554805 ELOVL1Q9BW60 279 aa8.01□□□□□ -1.13
SYNE2-213ENST00000554805 FZR1Q9UM11 496 aa8.01□□□□□ -1.13
SYNE2-213ENST00000554805 WASF3Q9UPY6 502 aa8.01□□□□□ -1.13
SYNE2-213ENST00000554805 A0A0U1RQK1 487 aa8.01□□□□□ -1.13
SYNE2-213ENST00000554805 KLRC4-KLRK1H3BQV0 150 aa8.01□□□□□ -1.13
SYNE2-213ENST00000554805 KBTBD11O94819 623 aa8.01□□□□□ -1.13
SYNE2-213ENST00000554805 IL18BPO95998 194 aa8.01□□□□□ -1.13
SYNE2-213ENST00000554805 CRYAAP02489 173 aa8.01□□□□□ -1.13
SYNE2-213ENST00000554805 EGR1P18146 543 aa8.01□□□□□ -1.13
SYNE2-213ENST00000554805 RPL30P62888 115 aaKnown RBP8.01□□□□□ -1.13
SYNE2-213ENST00000554805 RAB24Q969Q5 203 aa8.01□□□□□ -1.13
SYNE2-213ENST00000554805 PKDREJQ9NTG1 2253 aa8.01□□□□□ -1.13
SYNE2-213ENST00000554805 ODAMA1E959 279 aa8.01□□□□□ -1.13
SYNE2-213ENST00000554805 C17orf98A8MV24 154 aa8.01□□□□□ -1.13
SYNE2-213ENST00000554805 IGLV2-14P01704 120 aa8.01□□□□□ -1.13
SYNE2-213ENST00000554805 GYPAP02724 150 aa8.01□□□□□ -1.13
SYNE2-213ENST00000554805 RPL23P62829 140 aaKnown RBP8.01□□□□□ -1.13
SYNE2-213ENST00000554805 Q3ZCU0 254 aa8.01□□□□□ -1.13
SYNE2-213ENST00000554805 CYP2G1PQ6ZSU1 146 aa8.01□□□□□ -1.13
SYNE2-213ENST00000554805 WDR86Q86TI4 376 aa8.01□□□□□ -1.13
SYNE2-213ENST00000554805 CNEP1R1Q8N9A8 125 aa8.01□□□□□ -1.13
SYNE2-213ENST00000554805 BCL2L2Q92843 193 aaPredicted RBP8.01□□□□□ -1.13
SYNE2-213ENST00000554805 PPP1R14DQ9NXH3 145 aa8.01□□□□□ -1.13
SYNE2-213ENST00000554805 FUT9Q9Y231 359 aa8.01□□□□□ -1.13
SYNE2-213ENST00000554805 KLF13Q9Y2Y9 288 aaPredicted RBP8.01□□□□□ -1.13
SYNE2-213ENST00000554805 TRBV24-1A0A075B6N3 115 aa8□□□□□ -1.13
SYNE2-213ENST00000554805 A0A1W2PPV4 95 aa8□□□□□ -1.13
SYNE2-213ENST00000554805 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8□□□□□ -1.13
SYNE2-213ENST00000554805 HBZP02008 142 aa8□□□□□ -1.13
SYNE2-213ENST00000554805 MBP02144 154 aa8□□□□□ -1.13
SYNE2-213ENST00000554805 EDDM3BP56851 147 aa8□□□□□ -1.13
SYNE2-213ENST00000554805 LINC00205P59089 165 aa8□□□□□ -1.13
SYNE2-213ENST00000554805 TGFBR3Q03167 851 aa8□□□□□ -1.13
SYNE2-213ENST00000554805 ZNF600Q6ZNG1 722 aa8□□□□□ -1.13
SYNE2-213ENST00000554805 NEIL1Q96FI4 390 aaPredicted RBP8□□□□□ -1.13
SYNE2-213ENST00000554805 WDYHV1Q96HA8 205 aa8□□□□□ -1.13
SYNE2-213ENST00000554805 SRD5A3Q9H8P0 318 aa8□□□□□ -1.13
SYNE2-213ENST00000554805 TMEM242Q9NWH2 141 aa8□□□□□ -1.13
SYNE2-213ENST00000554805 IL17BQ9UHF5 180 aa8□□□□□ -1.13
SYNE2-213ENST00000554805 PSG11Q9UQ72 335 aa8□□□□□ -1.13
SYNE2-213ENST00000554805 KIAA1549Q9HCM3 1950 aa8□□□□□ -1.13
SYNE2-213ENST00000554805 SPTBN4Q9H254 2564 aa8□□□□□ -1.13
SYNE2-213ENST00000554805 CHD3Q12873 2000 aaKnown RBP8□□□□□ -1.13
SYNE2-213ENST00000554805 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8□□□□□ -1.13
SYNE2-213ENST00000554805 LNP1A1A4G5 178 aa8□□□□□ -1.13
SYNE2-213ENST00000554805 C9orf172C9J069 976 aa8□□□□□ -1.13
SYNE2-213ENST00000554805 C12orf77C9JDV5 145 aa8□□□□□ -1.13
SYNE2-213ENST00000554805 PSPNO60542 156 aa8□□□□□ -1.13
SYNE2-213ENST00000554805 SP1P08047 785 aa8□□□□□ -1.13
SYNE2-213ENST00000554805 CD46P15529 392 aa8□□□□□ -1.13
SYNE2-213ENST00000554805 HOXC12P31275 282 aa8□□□□□ -1.13
SYNE2-213ENST00000554805 PKIAP61925 76 aa8□□□□□ -1.13
SYNE2-213ENST00000554805 SP5Q6BEB4 398 aaPredicted RBP8□□□□□ -1.13
SYNE2-213ENST00000554805 MRPL41Q8IXM3 137 aaKnown RBP8□□□□□ -1.13
SYNE2-213ENST00000554805 ZNF645Q8N7E2 425 aa8□□□□□ -1.13
SYNE2-213ENST00000554805 PRDM13Q9H4Q3 707 aa8□□□□□ -1.13
SYNE2-213ENST00000554805 GTF3C1Q12789 2109 aa8□□□□□ -1.13
SYNE2-213ENST00000554805 TRGV5A0A0B4J1U4 118 aa7.99□□□□□ -1.13
SYNE2-213ENST00000554805 LRRC30A6NM36 301 aa7.99□□□□□ -1.13
SYNE2-213ENST00000554805 FAM90A26D6RGX4 464 aa7.99□□□□□ -1.13
SYNE2-213ENST00000554805 ST8SIA5O15466 376 aa7.99□□□□□ -1.13
SYNE2-213ENST00000554805 SOX15O60248 233 aa7.99□□□□□ -1.13
SYNE2-213ENST00000554805 IGHV3-13P01766 116 aa7.99□□□□□ -1.13
SYNE2-213ENST00000554805 IGHV3-7P01780 117 aa7.99□□□□□ -1.13
SYNE2-213ENST00000554805 HNF1AP20823 631 aa7.99□□□□□ -1.13
SYNE2-213ENST00000554805 DDTP30046 118 aa7.99□□□□□ -1.13
SYNE2-213ENST00000554805 FABP6P51161 128 aa7.99□□□□□ -1.13
SYNE2-213ENST00000554805 ATP6V1FQ16864 119 aa7.99□□□□□ -1.13
SYNE2-213ENST00000554805 TMEM14EPQ6UXP3 125 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms