RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 ADAM20O43506 726 aa9.33□□□□□ -0.92
SRP54-205ENST00000554803 SSSCA1O60232 199 aa9.33□□□□□ -0.92
SRP54-205ENST00000554803 MBP02144 154 aa9.33□□□□□ -0.92
SRP54-205ENST00000554803 OPN1MWP04001 364 aa9.33□□□□□ -0.92
SRP54-205ENST00000554803 FBP1P09467 338 aa9.33□□□□□ -0.92
SRP54-205ENST00000554803 OPN1MW2P0DN77 364 aa9.33□□□□□ -0.92
SRP54-205ENST00000554803 OPN1MW3P0DN78 364 aa9.33□□□□□ -0.92
SRP54-205ENST00000554803 KIR2DL2P43627 348 aaPredicted RBP9.33□□□□□ -0.92
SRP54-205ENST00000554803 RND2P52198 227 aa9.33□□□□□ -0.92
SRP54-205ENST00000554803 FOXG1P55316 489 aaPredicted RBP9.33□□□□□ -0.92
SRP54-205ENST00000554803 POLR2GP62487 172 aaKnown RBP eCLIP9.33□□□□□ -0.92
SRP54-205ENST00000554803 GNG3P63215 75 aa9.33□□□□□ -0.92
SRP54-205ENST00000554803 ADAM5Q6NVV9 412 aa9.33□□□□□ -0.92
SRP54-205ENST00000554803 VWA1Q6PCB0 445 aa9.33□□□□□ -0.92
SRP54-205ENST00000554803 RBMS3Q6XE24 437 aaKnown RBP9.33□□□□□ -0.92
SRP54-205ENST00000554803 C1orf87Q8N0U7 546 aa9.33□□□□□ -0.92
SRP54-205ENST00000554803 ZFP82Q8N141 532 aa9.33□□□□□ -0.92
SRP54-205ENST00000554803 GAPTQ8N292 157 aa9.33□□□□□ -0.92
SRP54-205ENST00000554803 FAM24BQ8N5W8 94 aa9.33□□□□□ -0.92
SRP54-205ENST00000554803 ZNF610Q8N9Z0 462 aa9.33□□□□□ -0.92
SRP54-205ENST00000554803 OR11L1Q8NGX0 322 aa9.33□□□□□ -0.92
SRP54-205ENST00000554803 OR10J5Q8NHC4 309 aa9.33□□□□□ -0.92
SRP54-205ENST00000554803 CLDND2Q8NHS1 167 aa9.33□□□□□ -0.92
SRP54-205ENST00000554803 GMPPAQ96IJ6 420 aaPredicted RBP9.33□□□□□ -0.92
SRP54-205ENST00000554803 ALKBH3Q96Q83 286 aaPredicted RBP9.33□□□□□ -0.92
SRP54-205ENST00000554803 SH3BGRL3Q9H299 93 aa9.33□□□□□ -0.92
SRP54-205ENST00000554803 GSN-AS1Q9NRJ2 163 aa9.33□□□□□ -0.92
SRP54-205ENST00000554803 HSD17B6O14756 317 aa9.32□□□□□ -0.92
SRP54-205ENST00000554803 PGLYRP1O75594 196 aaPredicted RBP9.32□□□□□ -0.92
SRP54-205ENST00000554803 TNFSF13O75888 250 aa9.32□□□□□ -0.92
SRP54-205ENST00000554803 TUBG1P23258 451 aa9.32□□□□□ -0.92
SRP54-205ENST00000554803 PPP1CCP36873 323 aaKnown RBP9.32□□□□□ -0.92
SRP54-205ENST00000554803 DYNLT3P51808 116 aa9.32□□□□□ -0.92
SRP54-205ENST00000554803 KIAA0141Q14154 515 aaPredicted RBP9.32□□□□□ -0.92
SRP54-205ENST00000554803 ICAM4Q14773 271 aa9.32□□□□□ -0.92
SRP54-205ENST00000554803 IGSF11Q5DX21 431 aa9.32□□□□□ -0.92
SRP54-205ENST00000554803 SLC25A24Q6NUK1 477 aa9.32□□□□□ -0.92
SRP54-205ENST00000554803 ZNF818PQ6ZRF7 136 aa9.32□□□□□ -0.92
SRP54-205ENST00000554803 CALHM1Q8IU99 346 aa9.32□□□□□ -0.92
SRP54-205ENST00000554803 CNEP1R1Q8N9A8 125 aa9.32□□□□□ -0.92
SRP54-205ENST00000554803 OR56B2PQ8NGI1 322 aa9.32□□□□□ -0.92
SRP54-205ENST00000554803 RAB39BQ96DA2 213 aa9.32□□□□□ -0.92
SRP54-205ENST00000554803 BSCL2Q96G97 398 aaPredicted RBP9.32□□□□□ -0.92
SRP54-205ENST00000554803 AGMATQ9BSE5 352 aa9.32□□□□□ -0.92
SRP54-205ENST00000554803 NIT2Q9NQR4 276 aa9.32□□□□□ -0.92
SRP54-205ENST00000554803 TUBG2Q9NRH3 451 aa9.32□□□□□ -0.92
SRP54-205ENST00000554803 GAR1Q9NY12 217 aaKnown RBP9.32□□□□□ -0.92
SRP54-205ENST00000554803 LAMP3Q9UQV4 416 aa9.32□□□□□ -0.92
SRP54-205ENST00000554803 POLDIP2Q9Y2S7 368 aa9.32□□□□□ -0.92
SRP54-205ENST00000554803 PUS1Q9Y606 427 aaKnown RBP eCLIP9.32□□□□□ -0.92
SRP54-205ENST00000554803 PRKDCP78527 4128 aaKnown RBP9.31□□□□□ -0.92
SRP54-205ENST00000554803 TRBV24-1A0A075B6N3 115 aa9.31□□□□□ -0.92
SRP54-205ENST00000554803 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.31□□□□□ -0.92
SRP54-205ENST00000554803 CLDN34H7C241 214 aa9.31□□□□□ -0.92
SRP54-205ENST00000554803 J3QT63 122 aa9.31□□□□□ -0.92
SRP54-205ENST00000554803 PPIHO43447 177 aaKnown RBP9.31□□□□□ -0.92
SRP54-205ENST00000554803 CHST1O43916 411 aa9.31□□□□□ -0.92
SRP54-205ENST00000554803 CYB5R3P00387 301 aaPredicted RBP9.31□□□□□ -0.92
SRP54-205ENST00000554803 OR13C7P0DN81 318 aa9.31□□□□□ -0.92
SRP54-205ENST00000554803 BCL2P10415 239 aa9.31□□□□□ -0.92
SRP54-205ENST00000554803 BCL3P20749 454 aa9.31□□□□□ -0.92
SRP54-205ENST00000554803 HAAOP46952 286 aa9.31□□□□□ -0.92
SRP54-205ENST00000554803 FAM27E3Q08E93 113 aa9.31□□□□□ -0.92
SRP54-205ENST00000554803 AKIRIN2Q53H80 203 aa9.31□□□□□ -0.92
SRP54-205ENST00000554803 C9orf135Q5VTT2 229 aa9.31□□□□□ -0.92
SRP54-205ENST00000554803 FIP1L1Q6UN15 594 aaKnown RBP9.31□□□□□ -0.92
SRP54-205ENST00000554803 FAM214BQ7L5A3 538 aa9.31□□□□□ -0.92
SRP54-205ENST00000554803 CENPVQ7Z7K6 275 aaPredicted RBP9.31□□□□□ -0.92
SRP54-205ENST00000554803 NANPQ8TBE9 248 aa9.31□□□□□ -0.92
SRP54-205ENST00000554803 PLPPR1Q8TBJ4 325 aa9.31□□□□□ -0.92
SRP54-205ENST00000554803 NEK7Q8TDX7 302 aa9.31□□□□□ -0.92
SRP54-205ENST00000554803 OR5P3Q8WZ94 311 aa9.31□□□□□ -0.92
SRP54-205ENST00000554803 APH1AQ96BI3 265 aa9.31□□□□□ -0.92
SRP54-205ENST00000554803 STARD4Q96DR4 205 aa9.31□□□□□ -0.92
SRP54-205ENST00000554803 GLRX2Q9NS18 164 aa9.31□□□□□ -0.92
SRP54-205ENST00000554803 VAX2Q9UIW0 290 aa9.31□□□□□ -0.92
SRP54-205ENST00000554803 CADP27708 2225 aa9.31□□□□□ -0.92
SRP54-205ENST00000554803 hCG_1809904A0A1W2PP81 198 aa9.3□□□□□ -0.92
SRP54-205ENST00000554803 A0A1W2PPE2 198 aa9.3□□□□□ -0.92
SRP54-205ENST00000554803 A0A1W2PR64 198 aa9.3□□□□□ -0.92
SRP54-205ENST00000554803 A0A1W2PRV1 198 aa9.3□□□□□ -0.92
SRP54-205ENST00000554803 TMEM250H0YL14 139 aa9.3□□□□□ -0.92
SRP54-205ENST00000554803 SYNGR2O43760 224 aa9.3□□□□□ -0.92
SRP54-205ENST00000554803 CGAP01215 116 aa9.3□□□□□ -0.92
SRP54-205ENST00000554803 SELEP16581 610 aa9.3□□□□□ -0.92
SRP54-205ENST00000554803 RPS10P46783 165 aaKnown RBP9.3□□□□□ -0.92
SRP54-205ENST00000554803 FHITP49789 147 aa9.3□□□□□ -0.92
SRP54-205ENST00000554803 DLK1P80370 383 aa9.3□□□□□ -0.92
SRP54-205ENST00000554803 ARF1P84077 181 aaKnown RBP9.3□□□□□ -0.92
SRP54-205ENST00000554803 ELOBQ15370 118 aa9.3□□□□□ -0.92
SRP54-205ENST00000554803 GABRA6Q16445 453 aa9.3□□□□□ -0.92
SRP54-205ENST00000554803 TMEM41BQ5BJD5 291 aa9.3□□□□□ -0.92
SRP54-205ENST00000554803 FAM58AQ8N1B3 248 aa9.3□□□□□ -0.92
SRP54-205ENST00000554803 OR10V1Q8NGI7 309 aa9.3□□□□□ -0.92
SRP54-205ENST00000554803 RNASE11Q8TAA1 199 aaKnown RBP9.3□□□□□ -0.92
SRP54-205ENST00000554803 MRPL30Q8TCC3 161 aaKnown RBP9.3□□□□□ -0.92
SRP54-205ENST00000554803 RCC1LQ96I51 464 aaKnown RBP9.3□□□□□ -0.92
SRP54-205ENST00000554803 RTL8AQ9BWD3 113 aa9.3□□□□□ -0.92
SRP54-205ENST00000554803 MAGT1Q9H0U3 335 aa9.3□□□□□ -0.92
SRP54-205ENST00000554803 OPN3Q9H1Y3 402 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms