RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 PPP1R2P1Q96PQ5 205 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 OR2V2Q96R30 315 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 OR8B2Q96RD0 313 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 KIFC1Q9BW19 673 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 CDCA4Q9BXL8 241 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 SAV1Q9H4B6 383 aaPredicted RBP0.9□□□□□ -2.27
PRPF39-208ENST00000554785 ZNF430Q9H8G1 570 aaPredicted RBP0.9□□□□□ -2.27
PRPF39-208ENST00000554785 C12orf10Q9HB07 376 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 ZNF355PQ9NSJ1 428 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 TMEM106BQ9NUM4 274 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 MTCH1Q9NZJ7 389 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 TIMM22Q9Y584 194 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 IGHV1-69DA0A0B4J2H0 117 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 TMEM72A0PK05 275 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 ZNF99A8MXY4 864 aaPredicted RBP0.89□□□□□ -2.27
PRPF39-208ENST00000554785 SEC14L6B5MCN3 397 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 F5H5P2 479 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 WRBO00258 174 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 KPNA4O00629 521 aaPredicted RBP0.89□□□□□ -2.27
PRPF39-208ENST00000554785 GPR171O14626 319 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 BET1O15155 118 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 SYNGR1O43759 233 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 CCNB2O95067 398 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 VAMP5O95183 116 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 IGHV1-69P01742 117 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 GYPAP02724 150 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 C1QCP02747 245 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 HMGN2P05204 90 aaKnown RBP0.89□□□□□ -2.27
PRPF39-208ENST00000554785 EIF4EP06730 217 aaKnown RBP0.89□□□□□ -2.27
PRPF39-208ENST00000554785 CD3GP09693 182 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 PIPP12273 146 aaPredicted RBP0.89□□□□□ -2.27
PRPF39-208ENST00000554785 RAB3AP20336 220 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 GALP22466 123 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 DTYMKP23919 212 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 STOMP27105 288 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 ELK4P28324 431 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 HMOX2P30519 316 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 MPIP34949 423 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 FUSP35637 526 aaKnown RBP eCLIP0.89□□□□□ -2.27
PRPF39-208ENST00000554785 GLRXP35754 106 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 ARR3P36575 388 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 PMELP40967 661 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 EIF1P41567 113 aaKnown RBP0.89□□□□□ -2.27
PRPF39-208ENST00000554785 IDH2P48735 452 aaKnown RBP0.89□□□□□ -2.27
PRPF39-208ENST00000554785 GDI2P50395 445 aaKnown RBP0.89□□□□□ -2.27
PRPF39-208ENST00000554785 HAMPP81172 84 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 IL5RAQ01344 420 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 C2orf80Q0P641 193 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 SYCNQ0VAF6 134 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 ABCA11PQ4W5N1 156 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 C5orf47Q569G3 176 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 TNFAIP8L2Q6P589 184 aaPredicted RBP0.89□□□□□ -2.27
PRPF39-208ENST00000554785 LRRN1Q6UXK5 716 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 NTM-AS1Q6ZSK4 140 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 PAGE2Q7Z2X7 111 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 ABHD12BQ7Z5M8 362 aaPredicted RBP0.89□□□□□ -2.27
PRPF39-208ENST00000554785 CALHM3Q86XJ0 350 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 NDUFA11Q86Y39 141 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 UBL4BQ8N7F7 174 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 CLDN22Q8N7P3 220 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 OR9G4Q8NGQ1 327 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 OR6N1Q8NGY5 312 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 COQ8AQ8NI60 647 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 PIGXQ8TBF5 258 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 SLC25A40Q8TBP6 338 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 CASTOR1Q8WTX7 329 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 LRRC29Q8WV35 223 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 C11orf40Q8WZ69 217 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 SLC7A6Q92536 515 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 FRZBQ92765 325 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 PEX13Q92968 403 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 PRRC1Q96M27 445 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 TIMM17AQ99595 171 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 BPIFA3Q9BQP9 254 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 RSPO3Q9BXY4 272 aaPredicted RBP0.89□□□□□ -2.27
PRPF39-208ENST00000554785 ULBP2Q9BZM5 246 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 ACTR3CQ9C0K3 210 aaPredicted RBP0.89□□□□□ -2.27
PRPF39-208ENST00000554785 WFDC10AQ9H1F0 79 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 EDA2RQ9HAV5 297 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 UBQLN4Q9NRR5 601 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 CES1P1Q9UKY3 287 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 PSME2Q9UL46 239 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 HILPDAQ9Y5L2 63 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 TMEM14AQ9Y6G1 99 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 DSCAML1Q8TD84 2053 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 DNAH3Q8TD57 4116 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 IGLV2-18A0A075B6J9 118 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 TMED7-TICAM2A0A0A6YYA0 188 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 KBTBD11-OT1A0A1B0GTJ5 212 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 SERTM2A0A1B0GWG4 89 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 LRCOL1A6NCL2 159 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 ZNF705GA8MUZ8 300 aaPredicted RBP0.89□□□□□ -2.27
PRPF39-208ENST00000554785 ZNF879B4DU55 563 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 RNASEK-C17orf49H0YIS7 233 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 L7N2F9 121 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 NPFFO15130 113 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 RBFOX2O43251 390 aaKnown RBP eCLIP0.89□□□□□ -2.27
PRPF39-208ENST00000554785 RAD51CO43502 376 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 ENSAO43768 121 aaKnown RBP0.89□□□□□ -2.27
PRPF39-208ENST00000554785 FCN3O75636 299 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms