RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 TSHBP01222 138 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 IGHV3-7P01780 117 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 HSPB1P04792 205 aaKnown RBP3.67□□□□□ -1.82
ATXN3-228ENST00000554592 HMGN1P05114 100 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 CALCBP10092 127 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 BCL3P20749 454 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 DCKP27707 260 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 HTR1FP30939 366 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 CAPGP40121 348 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 RBP2P50120 134 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 TMBIM6P55061 237 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 DLK1P80370 383 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 SCN1BQ07699 218 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 ATP6AP1Q15904 470 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 LBHQ53QV2 105 aaPredicted RBP3.67□□□□□ -1.82
ATXN3-228ENST00000554592 RBM48Q5RL73 367 aaKnown RBP3.67□□□□□ -1.82
ATXN3-228ENST00000554592 BCL2L15Q5TBC7 163 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 TTC23Q5W5X9 447 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 LINC00322Q6ZN03 302 aaPredicted RBP3.67□□□□□ -1.82
ATXN3-228ENST00000554592 Q6ZTC4 211 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 SMIM29Q86T20 159 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 GTSCR1Q86UQ5 136 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 DHRSXQ8N5I4 330 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 RPP25LQ8N5L8 163 aaKnown RBP3.67□□□□□ -1.82
ATXN3-228ENST00000554592 AQP11Q8NBQ7 271 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 MINDY2Q8NBR6 621 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 CHST4Q8NCG5 386 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 CCDC54Q8NEL0 328 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 TEX47Q8TBZ9 253 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 LEAP2Q969E1 77 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 BORCS5Q969J3 196 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 COQ2Q96H96 371 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 NABP2Q9BQ15 211 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 HSPB9Q9BQS6 159 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 DGCR6LQ9BY27 220 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 BARHL1Q9BZE3 327 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 MOB1AQ9H8S9 216 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 PLEKHA1Q9HB21 404 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 RHOFQ9HBH0 211 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 SMPD3Q9NY59 655 aaPredicted RBP3.67□□□□□ -1.82
ATXN3-228ENST00000554592 CALYQ9NYX4 217 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 ZNF107Q9UII5 783 aaPredicted RBP3.67□□□□□ -1.82
ATXN3-228ENST00000554592 OR52A1Q9UKL2 312 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 IKZF2Q9UKS7 526 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 BLOC1S6Q9UL45 172 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 ERGIC3Q9Y282 383 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 GSTK1Q9Y2Q3 226 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 KCNK7Q9Y2U2 307 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 SNX5Q9Y5X3 404 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 WSB1Q9Y6I7 421 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 R4GMQ9 66 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 V9GYQ6 96 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 SORL1Q92673 2214 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 A0A087WW49 117 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 MEIKINA0A087WXM9 373 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 TRAV41A0A0B4J266 112 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 A0A1W2PPE3 182 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 NUPR2A6NF83 97 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 G3V318 75 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 H3BN98 237 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 SLC33A1O00400 549 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-228ENST00000554592 GNGT2O14610 69 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 EI24O14681 340 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 SYT7O43581 403 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 SRSF10O75494 262 aaKnown RBP3.66□□□□□ -1.82
ATXN3-228ENST00000554592 CNIH1O95406 144 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 CST1P01037 141 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 LGALS1P09382 135 aaKnown RBP3.66□□□□□ -1.82
ATXN3-228ENST00000554592 ZNF44P15621 663 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 CCL1P22362 96 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 PRKACBP22694 351 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 IL3RAP26951 378 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 MAGEA2P43356 314 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 REG1BP48304 166 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 GNG10P50151 68 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 SNU13P55769 128 aaKnown RBP3.66□□□□□ -1.82
ATXN3-228ENST00000554592 MTCP1P56278 107 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 GABARAPL2P60520 117 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 RAB40BQ12829 278 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 PDZK1IP1Q13113 114 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 GK3PQ14409 553 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 LTC4SQ16873 150 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 MICAQ29983 383 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 Q6P435 159 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 CEMP1Q6PRD7 247 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-228ENST00000554592 ZNF322Q6U7Q0 402 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-228ENST00000554592 MMD2Q8IY49 270 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 LINC00311Q8N616 119 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 YIPF7Q8N8F6 280 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 C8orf31Q8N9H6 132 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 TMEM104Q8NE00 496 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 OR51T1Q8NGJ9 327 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 RFESDQ8TAC1 157 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 RAB2BQ8WUD1 216 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 FCAMRQ8WWV6 532 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 C10orf35Q96D05 121 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 CIB1Q99828 191 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 APOL4Q9BPW4 351 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 CHST5Q9GZS9 411 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 COMMD4Q9H0A8 199 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms