RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 IGKV1-39P01597 117 aa2.94□□□□□ -1.94
SCFD1-211ENST00000554437 IGKV1D-39P04432 117 aa2.94□□□□□ -1.94
SCFD1-211ENST00000554437 ZNF823P16415 610 aa2.94□□□□□ -1.94
SCFD1-211ENST00000554437 S100A2P29034 98 aa2.94□□□□□ -1.94
SCFD1-211ENST00000554437 GABRA3P34903 492 aa2.94□□□□□ -1.94
SCFD1-211ENST00000554437 NUDT2P50583 147 aa2.94□□□□□ -1.94
SCFD1-211ENST00000554437 SNRPD2P62316 118 aaKnown RBP2.94□□□□□ -1.94
SCFD1-211ENST00000554437 RHOBP62745 196 aa2.94□□□□□ -1.94
SCFD1-211ENST00000554437 FABP9Q0Z7S8 132 aa2.94□□□□□ -1.94
SCFD1-211ENST00000554437 IL15RAQ13261 267 aa2.94□□□□□ -1.94
SCFD1-211ENST00000554437 LINC00483Q53H64 154 aa2.94□□□□□ -1.94
SCFD1-211ENST00000554437 RNASE13Q5GAN3 156 aaKnown RBP2.94□□□□□ -1.94
SCFD1-211ENST00000554437 AKR1C8PQ5T2L2 129 aa2.94□□□□□ -1.94
SCFD1-211ENST00000554437 NANOGP8Q6NSW7 305 aa2.94□□□□□ -1.94
SCFD1-211ENST00000554437 GOLT1AQ6ZVE7 132 aa2.94□□□□□ -1.94
SCFD1-211ENST00000554437 ZNF561Q8N587 486 aa2.94□□□□□ -1.94
SCFD1-211ENST00000554437 ANKRD29Q8N6D5 301 aa2.94□□□□□ -1.94
SCFD1-211ENST00000554437 OR11H6Q8NGC7 330 aa2.94□□□□□ -1.94
SCFD1-211ENST00000554437 OR8B12Q8NGG6 310 aa2.94□□□□□ -1.94
SCFD1-211ENST00000554437 OR8A1Q8NGG7 326 aa2.94□□□□□ -1.94
SCFD1-211ENST00000554437 GRPEL2Q8TAA5 225 aa2.94□□□□□ -1.94
SCFD1-211ENST00000554437 C2orf15Q8WU43 125 aaKnown RBP2.94□□□□□ -1.94
SCFD1-211ENST00000554437 CT55Q8WUE5 264 aa2.94□□□□□ -1.94
SCFD1-211ENST00000554437 SKA2Q8WVK7 121 aaPredicted RBP2.94□□□□□ -1.94
SCFD1-211ENST00000554437 RWDD2AQ9UIY3 292 aa2.94□□□□□ -1.94
SCFD1-211ENST00000554437 DNAJC12Q9UKB3 198 aa2.94□□□□□ -1.94
SCFD1-211ENST00000554437 ANAPC10Q9UM13 185 aa2.94□□□□□ -1.94
SCFD1-211ENST00000554437 DCCP43146 1447 aa2.93□□□□□ -1.94
SCFD1-211ENST00000554437 SLIT3O75094 1523 aa2.93□□□□□ -1.94
SCFD1-211ENST00000554437 C2orf16Q68DN1 1984 aa2.93□□□□□ -1.94
SCFD1-211ENST00000554437 IGHV3-49A0A0A0MS15 119 aa2.93□□□□□ -1.94
SCFD1-211ENST00000554437 IGKV1-6A0A0C4DH72 117 aa2.93□□□□□ -1.94
SCFD1-211ENST00000554437 A8MWL6 223 aa2.93□□□□□ -1.94
SCFD1-211ENST00000554437 G3V2T6 193 aa2.93□□□□□ -1.94
SCFD1-211ENST00000554437 M0R381 172 aa2.93□□□□□ -1.94
SCFD1-211ENST00000554437 HMGB3O15347 200 aaKnown RBP2.93□□□□□ -1.94
SCFD1-211ENST00000554437 ARPC5O15511 151 aa2.93□□□□□ -1.94
SCFD1-211ENST00000554437 CDRT1O95170 752 aa2.93□□□□□ -1.94
SCFD1-211ENST00000554437 MT-CO2P00403 227 aa2.93□□□□□ -1.94
SCFD1-211ENST00000554437 LTAP01374 205 aa2.93□□□□□ -1.94
SCFD1-211ENST00000554437 HLA-DRB1P01911 266 aa2.93□□□□□ -1.94
SCFD1-211ENST00000554437 SERPINE1P05121 402 aa2.93□□□□□ -1.94
SCFD1-211ENST00000554437 BTN1A1Q13410 526 aa2.93□□□□□ -1.94
SCFD1-211ENST00000554437 KCNJ8Q15842 424 aa2.93□□□□□ -1.94
SCFD1-211ENST00000554437 HES3Q5TGS1 186 aa2.93□□□□□ -1.94
SCFD1-211ENST00000554437 LAIR2Q6ISS4 152 aa2.93□□□□□ -1.94
SCFD1-211ENST00000554437 MORN3Q6PF18 240 aaPredicted RBP2.93□□□□□ -1.94
SCFD1-211ENST00000554437 DAZ4Q86SG3 579 aaKnown RBP2.93□□□□□ -1.94
SCFD1-211ENST00000554437 DHFR2Q86XF0 187 aa2.93□□□□□ -1.94
SCFD1-211ENST00000554437 ZNF695Q8IW36 515 aa2.93□□□□□ -1.94
SCFD1-211ENST00000554437 KLK6Q92876 244 aa2.93□□□□□ -1.94
SCFD1-211ENST00000554437 PDXPQ96GD0 296 aa2.93□□□□□ -1.94
SCFD1-211ENST00000554437 CNBD2Q96M20 576 aa2.93□□□□□ -1.94
SCFD1-211ENST00000554437 CHCHD7Q9BUK0 85 aa2.93□□□□□ -1.94
SCFD1-211ENST00000554437 TMEM147Q9BVK8 224 aa2.93□□□□□ -1.94
SCFD1-211ENST00000554437 DAZ1Q9NQZ3 744 aaKnown RBP2.93□□□□□ -1.94
SCFD1-211ENST00000554437 PRTFDC1Q9NRG1 225 aa2.93□□□□□ -1.94
SCFD1-211ENST00000554437 DHCR7Q9UBM7 475 aaKnown RBP2.93□□□□□ -1.94
SCFD1-211ENST00000554437 TMEM56-RWDD3S4R434 201 aa2.93□□□□□ -1.94
SCFD1-211ENST00000554437 A0A1W2PP18 115 aa2.92□□□□□ -1.94
SCFD1-211ENST00000554437 A0A1W2PQ67 120 aa2.92□□□□□ -1.94
SCFD1-211ENST00000554437 TRAPPC13A5PLN9 417 aa2.92□□□□□ -1.94
SCFD1-211ENST00000554437 MAP1LC3B2A6NCE7 125 aa2.92□□□□□ -1.94
SCFD1-211ENST00000554437 M0QZK8 103 aa2.92□□□□□ -1.94
SCFD1-211ENST00000554437 ORC5O43913 435 aa2.92□□□□□ -1.94
SCFD1-211ENST00000554437 MFSD11O43934 449 aa2.92□□□□□ -1.94
SCFD1-211ENST00000554437 PFDN1O60925 122 aa2.92□□□□□ -1.94
SCFD1-211ENST00000554437 APOMO95445 188 aa2.92□□□□□ -1.94
SCFD1-211ENST00000554437 CRYZL1O95825 349 aa2.92□□□□□ -1.94
SCFD1-211ENST00000554437 IGLV3-25P01717 112 aa2.92□□□□□ -1.94
SCFD1-211ENST00000554437 PPBPP02775 128 aa2.92□□□□□ -1.94
SCFD1-211ENST00000554437 HLA-DQB2P05538 268 aa2.92□□□□□ -1.94
SCFD1-211ENST00000554437 OR56A5P0C7T3 313 aa2.92□□□□□ -1.94
SCFD1-211ENST00000554437 TLX1NBP0CAT3 122 aa2.92□□□□□ -1.94
SCFD1-211ENST00000554437 CNTFRP26992 372 aa2.92□□□□□ -1.94
SCFD1-211ENST00000554437 OR10J1P30954 320 aa2.92□□□□□ -1.94
SCFD1-211ENST00000554437 PHBP35232 272 aa2.92□□□□□ -1.94
SCFD1-211ENST00000554437 CA7P43166 264 aa2.92□□□□□ -1.94
SCFD1-211ENST00000554437 ESRRGP62508 458 aa2.92□□□□□ -1.94
SCFD1-211ENST00000554437 RBX1P62877 108 aa2.92□□□□□ -1.94
SCFD1-211ENST00000554437 CAV1Q03135 178 aa2.92□□□□□ -1.94
SCFD1-211ENST00000554437 UBE2SQ16763 222 aa2.92□□□□□ -1.94
SCFD1-211ENST00000554437 EIF4E3Q8N5X7 224 aaKnown RBP2.92□□□□□ -1.94
SCFD1-211ENST00000554437 C15orf56Q8N910 161 aa2.92□□□□□ -1.94
SCFD1-211ENST00000554437 GDPD1Q8N9F7 314 aa2.92□□□□□ -1.94
SCFD1-211ENST00000554437 C12orf43Q96C57 262 aaKnown RBP2.92□□□□□ -1.94
SCFD1-211ENST00000554437 MS4A6EQ96DS6 147 aa2.92□□□□□ -1.94
SCFD1-211ENST00000554437 TCEAL4Q96EI5 215 aa2.92□□□□□ -1.94
SCFD1-211ENST00000554437 TRIB3Q96RU7 358 aa2.92□□□□□ -1.94
SCFD1-211ENST00000554437 MAP1LC3BQ9GZQ8 125 aa2.92□□□□□ -1.94
SCFD1-211ENST00000554437 SPANXA1Q9NS26 97 aa2.92□□□□□ -1.94
SCFD1-211ENST00000554437 LYRM2Q9NU23 88 aaPredicted RBP2.92□□□□□ -1.94
SCFD1-211ENST00000554437 ZNF492Q9P255 531 aa2.92□□□□□ -1.94
SCFD1-211ENST00000554437 PRNDQ9UKY0 176 aa2.92□□□□□ -1.94
SCFD1-211ENST00000554437 YTHDC2Q9H6S0 1430 aaKnown RBP2.92□□□□□ -1.94
SCFD1-211ENST00000554437 RTL1A6NKG5 1358 aa2.91□□□□□ -1.94
SCFD1-211ENST00000554437 ARHGEF10O15013 1369 aa2.91□□□□□ -1.94
SCFD1-211ENST00000554437 IGHV1-69-2A0A0G2JMI3 117 aa2.91□□□□□ -1.94
SCFD1-211ENST00000554437 IGSF23A1L1A6 192 aa2.91□□□□□ -1.94
SCFD1-211ENST00000554437 TMEM150BA6NC51 233 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms