RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 SLC38A11Q08AI6 406 aa14.31□□□□□ -0.12
PPP4R3A-202ENST00000554390 ZDHHC23Q8IYP9 409 aa14.31□□□□□ -0.12
PPP4R3A-202ENST00000554390 PCED1AQ9H1Q7 454 aa14.31□□□□□ -0.12
PPP4R3A-202ENST00000554390 UBE2ZQ9H832 354 aaPredicted RBP14.31□□□□□ -0.12
PPP4R3A-202ENST00000554390 KIAA1549Q9HCM3 1950 aa14.3□□□□□ -0.12
PPP4R3A-202ENST00000554390 WDR1O75083 606 aa14.3□□□□□ -0.12
PPP4R3A-202ENST00000554390 IGKV1-39P01597 117 aa14.3□□□□□ -0.12
PPP4R3A-202ENST00000554390 IGKV1D-39P04432 117 aa14.3□□□□□ -0.12
PPP4R3A-202ENST00000554390 P04436 131 aa14.3□□□□□ -0.12
PPP4R3A-202ENST00000554390 LINC01551Q86U37 167 aa14.3□□□□□ -0.12
PPP4R3A-202ENST00000554390 KCNS2Q9ULS6 477 aa14.3□□□□□ -0.12
PPP4R3A-202ENST00000554390 FAM166BA8MTA8 275 aa14.3□□□□□ -0.12
PPP4R3A-202ENST00000554390 MLNRO43193 412 aa14.3□□□□□ -0.12
PPP4R3A-202ENST00000554390 S100GP29377 79 aa14.3□□□□□ -0.12
PPP4R3A-202ENST00000554390 TUSC5Q8IXB3 177 aa14.3□□□□□ -0.12
PPP4R3A-202ENST00000554390 OR10G9Q8NGN4 311 aa14.3□□□□□ -0.12
PPP4R3A-202ENST00000554390 OR10G7Q8NGN6 311 aa14.3□□□□□ -0.12
PPP4R3A-202ENST00000554390 RNASE8Q8TDE3 154 aaKnown RBP14.3□□□□□ -0.12
PPP4R3A-202ENST00000554390 SAP25Q8TEE9 199 aa14.3□□□□□ -0.12
PPP4R3A-202ENST00000554390 CXCL12P48061 93 aa14.29□□□□□ -0.12
PPP4R3A-202ENST00000554390 LINC00310P59036 64 aa14.29□□□□□ -0.12
PPP4R3A-202ENST00000554390 PAFAH1B2P68402 229 aa14.29□□□□□ -0.12
PPP4R3A-202ENST00000554390 PMP22Q01453 160 aa14.29□□□□□ -0.12
PPP4R3A-202ENST00000554390 AGBL5Q8NDL9 886 aa14.29□□□□□ -0.12
PPP4R3A-202ENST00000554390 SGMS2Q8NHU3 365 aa14.29□□□□□ -0.12
PPP4R3A-202ENST00000554390 PARD6GQ9BYG4 376 aaPredicted RBP14.29□□□□□ -0.12
PPP4R3A-202ENST00000554390 MSL2Q9HCI7 577 aa14.29□□□□□ -0.12
PPP4R3A-202ENST00000554390 RYDENQ9NUL5 291 aaKnown RBP14.29□□□□□ -0.12
PPP4R3A-202ENST00000554390 C1QTNF9P0C862 333 aa14.29□□□□□ -0.12
PPP4R3A-202ENST00000554390 MPLP40238 635 aa14.29□□□□□ -0.12
PPP4R3A-202ENST00000554390 COTL1Q14019 142 aa14.29□□□□□ -0.12
PPP4R3A-202ENST00000554390 MMDQ15546 238 aa14.29□□□□□ -0.12
PPP4R3A-202ENST00000554390 TMPRSS7Q7RTY8 843 aa14.29□□□□□ -0.12
PPP4R3A-202ENST00000554390 SLC35E1Q96K37 410 aa14.29□□□□□ -0.12
PPP4R3A-202ENST00000554390 ZDHHC11Q9H8X9 412 aa14.29□□□□□ -0.12
PPP4R3A-202ENST00000554390 ELOVL5Q9NYP7 299 aa14.29□□□□□ -0.12
PPP4R3A-202ENST00000554390 MRPS17Q9Y2R5 130 aaKnown RBP14.29□□□□□ -0.12
PPP4R3A-202ENST00000554390 KIR2DS1A0A191URI9 304 aa14.28□□□□□ -0.12
PPP4R3A-202ENST00000554390 WNT2P09544 360 aa14.28□□□□□ -0.12
PPP4R3A-202ENST00000554390 KIR2DS4P43632 304 aa14.28□□□□□ -0.12
PPP4R3A-202ENST00000554390 CEBPDP49716 269 aaPredicted RBP14.28□□□□□ -0.12
PPP4R3A-202ENST00000554390 KIR2DS1Q14954 304 aa14.28□□□□□ -0.12
PPP4R3A-202ENST00000554390 PCSK4Q6UW60 755 aa14.28□□□□□ -0.12
PPP4R3A-202ENST00000554390 MRPL21Q7Z2W9 205 aaKnown RBP14.28□□□□□ -0.12
PPP4R3A-202ENST00000554390 PLPPR2Q96GM1 343 aa14.28□□□□□ -0.12
PPP4R3A-202ENST00000554390 PRDM6Q9NQX0 595 aa14.28□□□□□ -0.12
PPP4R3A-202ENST00000554390 ATP23Q9Y6H3 246 aa14.28□□□□□ -0.12
PPP4R3A-202ENST00000554390 CADP27708 2225 aa14.28□□□□□ -0.12
PPP4R3A-202ENST00000554390 C11orf94C9JXX5 98 aa14.28□□□□□ -0.12
PPP4R3A-202ENST00000554390 SIRPB1O00241 398 aa14.28□□□□□ -0.12
PPP4R3A-202ENST00000554390 IGKV1-5P01602 117 aa14.28□□□□□ -0.12
PPP4R3A-202ENST00000554390 RBX1P62877 108 aa14.28□□□□□ -0.12
PPP4R3A-202ENST00000554390 RPP30P78346 268 aaKnown RBP14.28□□□□□ -0.12
PPP4R3A-202ENST00000554390 FOXL1Q12952 345 aa14.28□□□□□ -0.12
PPP4R3A-202ENST00000554390 ATMQ13315 3056 aa14.28□□□□□ -0.12
PPP4R3A-202ENST00000554390 LYSMD4Q5XG99 296 aa14.28□□□□□ -0.12
PPP4R3A-202ENST00000554390 MAFAQ8NHW3 353 aaPredicted RBP14.28□□□□□ -0.12
PPP4R3A-202ENST00000554390 CPT1CQ8TCG5 803 aa14.28□□□□□ -0.12
PPP4R3A-202ENST00000554390 BTF3L4Q96K17 158 aa14.28□□□□□ -0.12
PPP4R3A-202ENST00000554390 CIB3Q96Q77 187 aaPredicted RBP14.28□□□□□ -0.12
PPP4R3A-202ENST00000554390 C12orf49Q9H741 205 aa14.28□□□□□ -0.12
PPP4R3A-202ENST00000554390 TIMM9Q9Y5J7 89 aa14.28□□□□□ -0.12
PPP4R3A-202ENST00000554390 YLPM1P49750 1951 aaKnown RBP14.28□□□□□ -0.12
PPP4R3A-202ENST00000554390 PGPEP1LA6NFU8 196 aa14.28□□□□□ -0.12
PPP4R3A-202ENST00000554390 K7ESF4 209 aa14.28□□□□□ -0.12
PPP4R3A-202ENST00000554390 SERF1AO75920 110 aa14.28□□□□□ -0.12
PPP4R3A-202ENST00000554390 CRYAAP02489 173 aa14.28□□□□□ -0.12
PPP4R3A-202ENST00000554390 FKBP2P26885 142 aaKnown RBP14.28□□□□□ -0.12
PPP4R3A-202ENST00000554390 SRSF7Q16629 238 aaKnown RBP eCLIP14.28□□□□□ -0.12
PPP4R3A-202ENST00000554390 ROS1P08922 2347 aa14.28□□□□□ -0.12
PPP4R3A-202ENST00000554390 DMXL1Q9Y485 3027 aa14.27□□□□□ -0.12
PPP4R3A-202ENST00000554390 MRPL33O75394 65 aaKnown RBP14.27□□□□□ -0.12
PPP4R3A-202ENST00000554390 CTXN2P0C2S0 81 aa14.27□□□□□ -0.12
PPP4R3A-202ENST00000554390 LSM10Q969L4 123 aaKnown RBP14.27□□□□□ -0.12
PPP4R3A-202ENST00000554390 C20orf202A1L168 122 aa14.27□□□□□ -0.13
PPP4R3A-202ENST00000554390 TRAPPC2LH3BP13 241 aa14.27□□□□□ -0.13
PPP4R3A-202ENST00000554390 CA6P23280 308 aa14.27□□□□□ -0.13
PPP4R3A-202ENST00000554390 COMPP49747 757 aaPredicted RBP14.27□□□□□ -0.13
PPP4R3A-202ENST00000554390 OR5AU1Q8NGC0 362 aa14.27□□□□□ -0.13
PPP4R3A-202ENST00000554390 DERL1Q9BUN8 251 aa14.27□□□□□ -0.13
PPP4R3A-202ENST00000554390 OR2W1Q9Y3N9 320 aa14.27□□□□□ -0.13
PPP4R3A-202ENST00000554390 CD99P14209 185 aa14.26□□□□□ -0.13
PPP4R3A-202ENST00000554390 MSMO1Q15800 293 aa14.26□□□□□ -0.13
PPP4R3A-202ENST00000554390 FFAR4Q5NUL3 377 aa14.26□□□□□ -0.13
PPP4R3A-202ENST00000554390 SAPCD1Q5SSQ6 148 aa14.26□□□□□ -0.13
PPP4R3A-202ENST00000554390 ZNF114Q8NC26 417 aa14.26□□□□□ -0.13
PPP4R3A-202ENST00000554390 YPEL3P61236 119 aaPredicted RBP14.26□□□□□ -0.13
PPP4R3A-202ENST00000554390 GNB1P62873 340 aa14.26□□□□□ -0.13
PPP4R3A-202ENST00000554390 ZNF324BQ6AW86 544 aaPredicted RBP14.26□□□□□ -0.13
PPP4R3A-202ENST00000554390 SPEM1Q8N4L4 309 aa14.26□□□□□ -0.13
PPP4R3A-202ENST00000554390 STPG4Q8N801 248 aa14.26□□□□□ -0.13
PPP4R3A-202ENST00000554390 GVINP1Q7Z2Y8 2422 aa14.25□□□□□ -0.13
PPP4R3A-202ENST00000554390 NDUFB8O95169 186 aa14.25□□□□□ -0.13
PPP4R3A-202ENST00000554390 CLDN1O95832 211 aa14.25□□□□□ -0.13
PPP4R3A-202ENST00000554390 LHX2P50458 406 aa14.25□□□□□ -0.13
PPP4R3A-202ENST00000554390 CXorf67Q86X51 503 aaPredicted RBP14.25□□□□□ -0.13
PPP4R3A-202ENST00000554390 PSMF1Q92530 271 aa14.25□□□□□ -0.13
PPP4R3A-202ENST00000554390 CCL25O15444 150 aa14.25□□□□□ -0.13
PPP4R3A-202ENST00000554390 RBFOX2O43251 390 aaKnown RBP eCLIP14.25□□□□□ -0.13
PPP4R3A-202ENST00000554390 NDUFB4O95168 129 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms