RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 HIST1H2BKO60814 126 aa12.18□□□□□ -0.46
ACTN1-211ENST00000553882 HIST1H2BJP06899 126 aa12.18□□□□□ -0.46
ACTN1-211ENST00000553882 HIST1H2BOP23527 126 aa12.18□□□□□ -0.46
ACTN1-211ENST00000553882 HIST1H2BBP33778 126 aa12.18□□□□□ -0.46
ACTN1-211ENST00000553882 HIST1H2BDP58876 126 aa12.18□□□□□ -0.46
ACTN1-211ENST00000553882 HIST1H2BCP62807 126 aa12.18□□□□□ -0.46
ACTN1-211ENST00000553882 TFF3Q07654 80 aa12.18□□□□□ -0.46
ACTN1-211ENST00000553882 HIST2H2BEQ16778 126 aa12.18□□□□□ -0.46
ACTN1-211ENST00000553882 C4orf17Q53FE4 359 aa12.18□□□□□ -0.46
ACTN1-211ENST00000553882 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.18□□□□□ -0.46
ACTN1-211ENST00000553882 SPNS3Q6ZMD2 512 aa12.18□□□□□ -0.46
ACTN1-211ENST00000553882 MRGPRGQ86SM5 289 aa12.18□□□□□ -0.46
ACTN1-211ENST00000553882 DTD1Q8TEA8 209 aa12.18□□□□□ -0.46
ACTN1-211ENST00000553882 HIST1H2BHQ93079 126 aa12.18□□□□□ -0.46
ACTN1-211ENST00000553882 PINX1Q96BK5 328 aaKnown RBP12.18□□□□□ -0.46
ACTN1-211ENST00000553882 HIST1H2BNQ99877 126 aa12.18□□□□□ -0.46
ACTN1-211ENST00000553882 HIST1H2BMQ99879 126 aa12.18□□□□□ -0.46
ACTN1-211ENST00000553882 CXXC4Q9H2H0 198 aa12.18□□□□□ -0.46
ACTN1-211ENST00000553882 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.18□□□□□ -0.46
ACTN1-211ENST00000553882 C1QTNF9BB2RNN3 333 aa12.17□□□□□ -0.46
ACTN1-211ENST00000553882 MDKP21741 143 aaPredicted RBP12.17□□□□□ -0.46
ACTN1-211ENST00000553882 FGF7P21781 194 aa12.17□□□□□ -0.46
ACTN1-211ENST00000553882 EIF4EBP1Q13541 118 aaPredicted RBP12.17□□□□□ -0.46
ACTN1-211ENST00000553882 H2BFWTQ7Z2G1 175 aa12.17□□□□□ -0.46
ACTN1-211ENST00000553882 P0C879 139 aa12.17□□□□□ -0.46
ACTN1-211ENST00000553882 RD3LP0DJH9 198 aa12.17□□□□□ -0.46
ACTN1-211ENST00000553882 CD81P60033 236 aa12.17□□□□□ -0.46
ACTN1-211ENST00000553882 GFI1BQ5VTD9 330 aa12.17□□□□□ -0.46
ACTN1-211ENST00000553882 GATAD1Q8WUU5 269 aa12.17□□□□□ -0.46
ACTN1-211ENST00000553882 RPUSD4Q96CM3 377 aaKnown RBP12.17□□□□□ -0.46
ACTN1-211ENST00000553882 FAM210BQ96KR6 192 aa12.17□□□□□ -0.46
ACTN1-211ENST00000553882 TOLLIPQ9H0E2 274 aa12.17□□□□□ -0.46
ACTN1-211ENST00000553882 FAM234AQ9H0X4 552 aa12.17□□□□□ -0.46
ACTN1-211ENST00000553882 SDF2L1Q9HCN8 221 aa12.17□□□□□ -0.46
ACTN1-211ENST00000553882 OTOGLQ3ZCN5 2332 aa12.16□□□□□ -0.46
ACTN1-211ENST00000553882 IGHG3P01860 377 aa12.16□□□□□ -0.46
ACTN1-211ENST00000553882 WT1P19544 449 aaPredicted RBP12.16□□□□□ -0.46
ACTN1-211ENST00000553882 HOXA5P20719 270 aa12.16□□□□□ -0.46
ACTN1-211ENST00000553882 ADIRFQ15847 76 aa12.16□□□□□ -0.46
ACTN1-211ENST00000553882 ZBTB34Q8NCN2 500 aa12.16□□□□□ -0.46
ACTN1-211ENST00000553882 OR10P1Q8NGE3 313 aa12.16□□□□□ -0.46
ACTN1-211ENST00000553882 SMIM7Q9BQ49 75 aa12.16□□□□□ -0.46
ACTN1-211ENST00000553882 B4DEV8 164 aa12.16□□□□□ -0.46
ACTN1-211ENST00000553882 CYB5R3P00387 301 aaPredicted RBP12.16□□□□□ -0.46
ACTN1-211ENST00000553882 GCH1P30793 250 aa12.16□□□□□ -0.46
ACTN1-211ENST00000553882 MEF2BQ02080 365 aaPredicted RBP12.16□□□□□ -0.46
ACTN1-211ENST00000553882 PNRC1Q12796 327 aaPredicted RBP12.16□□□□□ -0.46
ACTN1-211ENST00000553882 GUSBP1Q15486 140 aa12.16□□□□□ -0.46
ACTN1-211ENST00000553882 SSX9Q7RTT3 188 aa12.16□□□□□ -0.46
ACTN1-211ENST00000553882 LRRC29Q8WV35 223 aa12.16□□□□□ -0.46
ACTN1-211ENST00000553882 OPN3Q9H1Y3 402 aaPredicted RBP12.16□□□□□ -0.46
ACTN1-211ENST00000553882 DMXL2Q8TDJ6 3036 aa12.15□□□□□ -0.46
ACTN1-211ENST00000553882 MARCH11A6NNE9 402 aa12.15□□□□□ -0.46
ACTN1-211ENST00000553882 CLDN34H7C241 214 aa12.15□□□□□ -0.46
ACTN1-211ENST00000553882 IFNA1P01562 189 aa12.15□□□□□ -0.46
ACTN1-211ENST00000553882 SMIM21Q3B7S5 101 aa12.15□□□□□ -0.46
ACTN1-211ENST00000553882 FFAR4Q5NUL3 377 aa12.15□□□□□ -0.46
ACTN1-211ENST00000553882 WDR25Q64LD2 544 aaPredicted RBP12.15□□□□□ -0.46
ACTN1-211ENST00000553882 C1orf87Q8N0U7 546 aa12.15□□□□□ -0.46
ACTN1-211ENST00000553882 CD177Q8N6Q3 437 aa12.15□□□□□ -0.46
ACTN1-211ENST00000553882 OR2Z1Q8NG97 314 aa12.15□□□□□ -0.46
ACTN1-211ENST00000553882 OR10G9Q8NGN4 311 aa12.15□□□□□ -0.46
ACTN1-211ENST00000553882 OR10G7Q8NGN6 311 aa12.15□□□□□ -0.46
ACTN1-211ENST00000553882 TMEM147Q9BVK8 224 aa12.15□□□□□ -0.46
ACTN1-211ENST00000553882 GGACTQ9BVM4 153 aa12.15□□□□□ -0.46
ACTN1-211ENST00000553882 DUSP13Q9UII6 198 aa12.15□□□□□ -0.46
ACTN1-211ENST00000553882 ATMQ13315 3056 aa12.15□□□□□ -0.46
ACTN1-211ENST00000553882 ADGRG4Q8IZF6 3080 aa12.15□□□□□ -0.46
ACTN1-211ENST00000553882 CLDN14O95500 239 aa12.15□□□□□ -0.46
ACTN1-211ENST00000553882 HOXB1P14653 301 aaPredicted RBP12.15□□□□□ -0.46
ACTN1-211ENST00000553882 COX5AP20674 150 aa12.15□□□□□ -0.46
ACTN1-211ENST00000553882 CDX1P47902 265 aaPredicted RBP12.15□□□□□ -0.46
ACTN1-211ENST00000553882 NECAP1Q8NC96 275 aa12.15□□□□□ -0.46
ACTN1-211ENST00000553882 P2RX4Q99571 388 aa12.15□□□□□ -0.46
ACTN1-211ENST00000553882 HCFC1P51610 2035 aa12.14□□□□□ -0.47
ACTN1-211ENST00000553882 PMS2P5A8MQ11 134 aa12.14□□□□□ -0.47
ACTN1-211ENST00000553882 BMP5P22003 454 aa12.14□□□□□ -0.47
ACTN1-211ENST00000553882 ZNF718Q3SXZ3 478 aa12.14□□□□□ -0.47
ACTN1-211ENST00000553882 NCR3LG1Q68D85 454 aa12.14□□□□□ -0.47
ACTN1-211ENST00000553882 AGMATQ9BSE5 352 aa12.14□□□□□ -0.47
ACTN1-211ENST00000553882 NPCDR1Q9BY65 106 aa12.14□□□□□ -0.47
ACTN1-211ENST00000553882 PARD6GQ9BYG4 376 aaPredicted RBP12.14□□□□□ -0.47
ACTN1-211ENST00000553882 PLCE1Q9P212 2302 aa12.14□□□□□ -0.47
ACTN1-211ENST00000553882 IGHV2OR16-5A0A0B4J2B6 119 aa12.14□□□□□ -0.47
ACTN1-211ENST00000553882 SPAARA0A1B0GVQ0 90 aa12.14□□□□□ -0.47
ACTN1-211ENST00000553882 EGR1P18146 543 aa12.14□□□□□ -0.47
ACTN1-211ENST00000553882 NKX6-1P78426 367 aaPredicted RBP12.14□□□□□ -0.47
ACTN1-211ENST00000553882 CDPF1Q6NVV7 123 aa12.14□□□□□ -0.47
ACTN1-211ENST00000553882 C16orf54Q6UWD8 224 aa12.14□□□□□ -0.47
ACTN1-211ENST00000553882 VKORC1L1Q8N0U8 176 aa12.14□□□□□ -0.47
ACTN1-211ENST00000553882 FRZBQ92765 325 aa12.14□□□□□ -0.47
ACTN1-211ENST00000553882 QTRT1Q9BXR0 403 aaKnown RBP12.14□□□□□ -0.47
ACTN1-211ENST00000553882 OR51M1Q9H341 326 aa12.14□□□□□ -0.47
ACTN1-211ENST00000553882 IGHV3OR15-7A0A075B7D8 119 aa12.13□□□□□ -0.47
ACTN1-211ENST00000553882 TRAV20A0A0B4J274 112 aa12.13□□□□□ -0.47
ACTN1-211ENST00000553882 IGHV1-18A0A0C4DH31 117 aa12.13□□□□□ -0.47
ACTN1-211ENST00000553882 TRGC1P0CF51 173 aa12.13□□□□□ -0.47
ACTN1-211ENST00000553882 PYY3Q5JQD4 70 aa12.13□□□□□ -0.47
ACTN1-211ENST00000553882 LRP11Q86VZ4 500 aa12.13□□□□□ -0.47
ACTN1-211ENST00000553882 LURAP1LQ8IV03 231 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms