RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 TPRA1Q86W33 373 aa13.8□□□□□ -0.2
FOXN3-204ENST00000553840 ZNF383Q8NA42 475 aa13.8□□□□□ -0.2
FOXN3-204ENST00000553840 OR1N2Q8NGR9 330 aa13.8□□□□□ -0.2
FOXN3-204ENST00000553840 CABLES2Q9BTV7 478 aa13.8□□□□□ -0.2
FOXN3-204ENST00000553840 OR2D2Q9H210 308 aa13.8□□□□□ -0.2
FOXN3-204ENST00000553840 TXNL4BQ9NX01 149 aaKnown RBP13.8□□□□□ -0.2
FOXN3-204ENST00000553840 SSR3Q9UNL2 185 aa13.8□□□□□ -0.2
FOXN3-204ENST00000553840 A3GALT2U3KPV4 340 aa13.8□□□□□ -0.2
FOXN3-204ENST00000553840 TRBV6-7A0A0A0MS04 114 aa13.79□□□□□ -0.2
FOXN3-204ENST00000553840 NOTOA8MTQ0 251 aa13.79□□□□□ -0.2
FOXN3-204ENST00000553840 SEC14L6B5MCN3 397 aa13.79□□□□□ -0.2
FOXN3-204ENST00000553840 FCN1O00602 326 aa13.79□□□□□ -0.2
FOXN3-204ENST00000553840 PROP1O75360 226 aa13.79□□□□□ -0.2
FOXN3-204ENST00000553840 SCGNO76038 276 aa13.79□□□□□ -0.2
FOXN3-204ENST00000553840 ZNF616Q08AN1 781 aa13.79□□□□□ -0.2
FOXN3-204ENST00000553840 SRSF7Q16629 238 aaKnown RBP eCLIP13.79□□□□□ -0.22e-6■■■■□ 20.1
FOXN3-204ENST00000553840 IGSF11Q5DX21 431 aa13.79□□□□□ -0.2
FOXN3-204ENST00000553840 ZNF562Q6V9R5 426 aa13.79□□□□□ -0.2
FOXN3-204ENST00000553840 PPP1R27Q86WC6 154 aa13.79□□□□□ -0.2
FOXN3-204ENST00000553840 TSPAN14Q8NG11 270 aa13.79□□□□□ -0.2
FOXN3-204ENST00000553840 CLCC1Q96S66 551 aa13.79□□□□□ -0.2
FOXN3-204ENST00000553840 GNB4Q9HAV0 340 aa13.79□□□□□ -0.2
FOXN3-204ENST00000553840 SLC35D1Q9NTN3 355 aa13.79□□□□□ -0.2
FOXN3-204ENST00000553840 NUBP2Q9Y5Y2 271 aa13.79□□□□□ -0.2
FOXN3-204ENST00000553840 A0A087WXM4 84 aa13.78□□□□□ -0.2
FOXN3-204ENST00000553840 A0A0B4J203 849 aa13.78□□□□□ -0.2
FOXN3-204ENST00000553840 I3L521 148 aa13.78□□□□□ -0.2
FOXN3-204ENST00000553840 CA2P00918 260 aa13.78□□□□□ -0.2
FOXN3-204ENST00000553840 IGKV1-16P04430 117 aa13.78□□□□□ -0.2
FOXN3-204ENST00000553840 LUMP51884 338 aaPredicted RBP13.78□□□□□ -0.2
FOXN3-204ENST00000553840 NDPQ00604 133 aa13.78□□□□□ -0.2
FOXN3-204ENST00000553840 KIAA0141Q14154 515 aaPredicted RBP13.78□□□□□ -0.2
FOXN3-204ENST00000553840 AKIRIN2Q53H80 203 aa13.78□□□□□ -0.2
FOXN3-204ENST00000553840 ACTBL2Q562R1 376 aa13.78□□□□□ -0.2
FOXN3-204ENST00000553840 UNQ5815/PRO19632Q6UWF5 114 aa13.78□□□□□ -0.2
FOXN3-204ENST00000553840 OR5B12Q96R08 314 aa13.78□□□□□ -0.2
FOXN3-204ENST00000553840 ZNF230Q9UIE0 474 aaPredicted RBP13.78□□□□□ -0.2
FOXN3-204ENST00000553840 FBXO7Q9Y3I1 522 aa13.78□□□□□ -0.2
FOXN3-204ENST00000553840 SMIM30A4D0T7 59 aa13.77□□□□□ -0.21
FOXN3-204ENST00000553840 LGALS7P47929 136 aa13.77□□□□□ -0.21
FOXN3-204ENST00000553840 INSL3P51460 131 aa13.77□□□□□ -0.21
FOXN3-204ENST00000553840 CD69Q07108 199 aa13.77□□□□□ -0.21
FOXN3-204ENST00000553840 RTL8BQ17RB0 113 aa13.77□□□□□ -0.21
FOXN3-204ENST00000553840 Q6ZS49 121 aa13.77□□□□□ -0.21
FOXN3-204ENST00000553840 MAFIPQ8WZ33 124 aa13.77□□□□□ -0.21
FOXN3-204ENST00000553840 SLA2Q9H6Q3 261 aa13.77□□□□□ -0.21
FOXN3-204ENST00000553840 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.77□□□□□ -0.212e-6■■■■■ 35.4
FOXN3-204ENST00000553840 SDHAF2Q9NX18 166 aa13.77□□□□□ -0.21
FOXN3-204ENST00000553840 SLC25A17O43808 307 aa13.76□□□□□ -0.21
FOXN3-204ENST00000553840 CNIH1O95406 144 aa13.76□□□□□ -0.21
FOXN3-204ENST00000553840 RRASP10301 218 aa13.76□□□□□ -0.21
FOXN3-204ENST00000553840 DTYMKP23919 212 aa13.76□□□□□ -0.21
FOXN3-204ENST00000553840 LINC00205P59089 165 aa13.76□□□□□ -0.21
FOXN3-204ENST00000553840 PITPNAQ00169 270 aa13.76□□□□□ -0.21
FOXN3-204ENST00000553840 ZNF260Q3ZCT1 412 aa13.76□□□□□ -0.21
FOXN3-204ENST00000553840 CDNFQ49AH0 187 aa13.76□□□□□ -0.21
FOXN3-204ENST00000553840 C19orf54Q5BKX5 351 aa13.76□□□□□ -0.21
FOXN3-204ENST00000553840 NR2C2APQ86WQ0 139 aa13.76□□□□□ -0.21
FOXN3-204ENST00000553840 LFNGQ8NES3 379 aa13.76□□□□□ -0.21
FOXN3-204ENST00000553840 ARPC1AQ92747 370 aa13.76□□□□□ -0.21
FOXN3-204ENST00000553840 ADTRPQ96IZ2 230 aa13.76□□□□□ -0.21
FOXN3-204ENST00000553840 FAM103A1Q9BTL3 118 aaKnown RBP13.76□□□□□ -0.21
FOXN3-204ENST00000553840 VCX3AQ9NNX9 186 aa13.76□□□□□ -0.21
FOXN3-204ENST00000553840 DAPK2Q9UIK4 370 aa13.76□□□□□ -0.21
FOXN3-204ENST00000553840 SHOXO15266 292 aa13.75□□□□□ -0.21
FOXN3-204ENST00000553840 SOX15O60248 233 aa13.75□□□□□ -0.21
FOXN3-204ENST00000553840 CTXN2P0C2S0 81 aa13.75□□□□□ -0.21
FOXN3-204ENST00000553840 ECI1P42126 302 aa13.75□□□□□ -0.21
FOXN3-204ENST00000553840 GNB1P62873 340 aa13.75□□□□□ -0.21
FOXN3-204ENST00000553840 FXYD3Q14802 87 aa13.75□□□□□ -0.21
FOXN3-204ENST00000553840 HACD4Q5VWC8 232 aa13.75□□□□□ -0.21
FOXN3-204ENST00000553840 HARBI1Q96MB7 349 aa13.75□□□□□ -0.21
FOXN3-204ENST00000553840 DCSTAMPQ9H295 470 aa13.75□□□□□ -0.21
FOXN3-204ENST00000553840 LINC01619G3V211 115 aa13.74□□□□□ -0.21
FOXN3-204ENST00000553840 LGALS1P09382 135 aaKnown RBP13.74□□□□□ -0.21
FOXN3-204ENST00000553840 EGR2P11161 476 aaPredicted RBP13.74□□□□□ -0.21
FOXN3-204ENST00000553840 SFXN4Q6P4A7 337 aa13.74□□□□□ -0.21
FOXN3-204ENST00000553840 H1FOOQ8IZA3 346 aaPredicted RBP13.74□□□□□ -0.21
FOXN3-204ENST00000553840 GRPEL2Q8TAA5 225 aa13.74□□□□□ -0.21
FOXN3-204ENST00000553840 CASTOR1Q8WTX7 329 aa13.74□□□□□ -0.21
FOXN3-204ENST00000553840 TMEM68Q96MH6 324 aa13.74□□□□□ -0.21
FOXN3-204ENST00000553840 B9D2Q9BPU9 175 aa13.74□□□□□ -0.21
FOXN3-204ENST00000553840 ST6GALNAC5Q9BVH7 336 aa13.74□□□□□ -0.21
FOXN3-204ENST00000553840 ZNF355PQ9NSJ1 428 aa13.74□□□□□ -0.21
FOXN3-204ENST00000553840 OVOL1O14753 267 aa13.73□□□□□ -0.21
FOXN3-204ENST00000553840 SCAND1P57086 179 aa13.73□□□□□ -0.21
FOXN3-204ENST00000553840 TPPP2P59282 170 aa13.73□□□□□ -0.21
FOXN3-204ENST00000553840 GNG2P59768 71 aa13.73□□□□□ -0.21
FOXN3-204ENST00000553840 TMEM177Q53S58 311 aa13.73□□□□□ -0.21
FOXN3-204ENST00000553840 VAX1Q5SQQ9 334 aa13.73□□□□□ -0.21
FOXN3-204ENST00000553840 ZNF429Q86V71 674 aa13.73□□□□□ -0.21
FOXN3-204ENST00000553840 BVESQ8NE79 360 aa13.73□□□□□ -0.21
FOXN3-204ENST00000553840 MS4A10Q96PG2 267 aa13.73□□□□□ -0.21
FOXN3-204ENST00000553840 OR51E2Q9H255 320 aa13.73□□□□□ -0.21
FOXN3-204ENST00000553840 SCOCQ9UIL1 159 aa13.73□□□□□ -0.21
FOXN3-204ENST00000553840 ARPC1BO15143 372 aaKnown RBP13.72□□□□□ -0.21
FOXN3-204ENST00000553840 SLC22A5O76082 557 aa13.72□□□□□ -0.21
FOXN3-204ENST00000553840 TRGV3P03979 118 aa13.72□□□□□ -0.21
FOXN3-204ENST00000553840 SNRPBP14678 240 aaKnown RBP13.72□□□□□ -0.21
FOXN3-204ENST00000553840 CD36P16671 472 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms