RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 PAEPP09466 180 aa1.89□□□□□ -2.11
SCFD1-210ENST00000553693 SLC35E2BP0CK96 405 aa1.89□□□□□ -2.11
SCFD1-210ENST00000553693 RD3LP0DJH9 198 aa1.89□□□□□ -2.11
SCFD1-210ENST00000553693 SLC2A1P11166 492 aa1.89□□□□□ -2.11
SCFD1-210ENST00000553693 TAC1P20366 129 aa1.89□□□□□ -2.11
SCFD1-210ENST00000553693 PAX6P26367 422 aa1.89□□□□□ -2.11
SCFD1-210ENST00000553693 POLR2IP36954 125 aaKnown RBP1.89□□□□□ -2.11
SCFD1-210ENST00000553693 OPRK1P41145 380 aa1.89□□□□□ -2.11
SCFD1-210ENST00000553693 TAS2R43P59537 309 aa1.89□□□□□ -2.11
SCFD1-210ENST00000553693 RAB8AP61006 207 aa1.89□□□□□ -2.11
SCFD1-210ENST00000553693 CD164Q04900 197 aa1.89□□□□□ -2.11
SCFD1-210ENST00000553693 ATP5G2Q06055 141 aa1.89□□□□□ -2.11
SCFD1-210ENST00000553693 LOXL1Q08397 574 aaPredicted RBP1.89□□□□□ -2.11
SCFD1-210ENST00000553693 CEACAM21Q3KPI0 293 aa1.89□□□□□ -2.11
SCFD1-210ENST00000553693 PYCR3Q53H96 274 aa1.89□□□□□ -2.11
SCFD1-210ENST00000553693 XKRXQ6PP77 449 aa1.89□□□□□ -2.11
SCFD1-210ENST00000553693 Q6ZR03 302 aa1.89□□□□□ -2.11
SCFD1-210ENST00000553693 FAM231DQ6ZW35 169 aa1.89□□□□□ -2.11
SCFD1-210ENST00000553693 BHLHA15Q7RTS1 189 aaPredicted RBP1.89□□□□□ -2.11
SCFD1-210ENST00000553693 ORMDL3Q8N138 153 aa1.89□□□□□ -2.11
SCFD1-210ENST00000553693 SPICQ8N5J4 248 aa1.89□□□□□ -2.11
SCFD1-210ENST00000553693 RNF10Q8N5U6 811 aaKnown RBP1.89□□□□□ -2.11
SCFD1-210ENST00000553693 OR2Z1Q8NG97 314 aa1.89□□□□□ -2.11
SCFD1-210ENST00000553693 OR5H2Q8NGV7 314 aa1.89□□□□□ -2.11
SCFD1-210ENST00000553693 ZNF420Q8TAQ5 688 aaPredicted RBP1.89□□□□□ -2.11
SCFD1-210ENST00000553693 RORBQ92753 470 aa1.89□□□□□ -2.11
SCFD1-210ENST00000553693 SLC25A46Q96AG3 418 aa1.89□□□□□ -2.11
SCFD1-210ENST00000553693 FAM19A4Q96LR4 140 aa1.89□□□□□ -2.11
SCFD1-210ENST00000553693 YPEL4Q96NS1 127 aa1.89□□□□□ -2.11
SCFD1-210ENST00000553693 GPR82Q96P67 336 aa1.89□□□□□ -2.11
SCFD1-210ENST00000553693 DOK1Q99704 481 aa1.89□□□□□ -2.11
SCFD1-210ENST00000553693 WFDC1Q9HC57 220 aa1.89□□□□□ -2.11
SCFD1-210ENST00000553693 PARP11Q9NR21 331 aa1.89□□□□□ -2.11
SCFD1-210ENST00000553693 C8orf17Q9NRJ1 99 aa1.89□□□□□ -2.11
SCFD1-210ENST00000553693 TAS2R5Q9NYW4 299 aa1.89□□□□□ -2.11
SCFD1-210ENST00000553693 CYB5R1Q9UHQ9 305 aa1.89□□□□□ -2.11
SCFD1-210ENST00000553693 SNX24Q9Y343 169 aa1.89□□□□□ -2.11
SCFD1-210ENST00000553693 COQ4Q9Y3A0 265 aa1.89□□□□□ -2.11
SCFD1-210ENST00000553693 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.89□□□□□ -2.11
SCFD1-210ENST00000553693 COL6A5A8TX70 2615 aa1.89□□□□□ -2.11
SCFD1-210ENST00000553693 POLEQ07864 2286 aa1.89□□□□□ -2.11
SCFD1-210ENST00000553693 ANKRD36A6QL64 1941 aa1.89□□□□□ -2.11
SCFD1-210ENST00000553693 STAB1Q9NY15 2570 aa1.89□□□□□ -2.11
SCFD1-210ENST00000553693 DIDO1Q9BTC0 2240 aaKnown RBP1.89□□□□□ -2.11
SCFD1-210ENST00000553693 PKDREJQ9NTG1 2253 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 MXRA5Q9NR99 2828 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 TRAV8-2A0A0B4J237 113 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 CXorf51AA0A1B0GTR3 108 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 TMEM213A2RRL7 107 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 C5orf63A6NC05 138 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 RBFOX3A6NFN3 312 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 EFCAB9A8MZ26 197 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 C9J4A7 227 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 SMLR1H3BR10 107 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 TOX3O15405 576 aaPredicted RBP1.88□□□□□ -2.11
SCFD1-210ENST00000553693 CRTAPO75718 401 aaPredicted RBP1.88□□□□□ -2.11
SCFD1-210ENST00000553693 KLF7O75840 302 aaPredicted RBP1.88□□□□□ -2.11
SCFD1-210ENST00000553693 CXorf1O96002 111 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 SOD1P00441 154 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 NELFEP18615 380 aaKnown RBP1.88□□□□□ -2.11
SCFD1-210ENST00000553693 ELK4P28324 431 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 PYCR1P32322 319 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 MPIP34949 423 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 CA7P43166 264 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 UBE2IP63279 158 aaKnown RBP1.88□□□□□ -2.11
SCFD1-210ENST00000553693 HBG1P69891 147 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 HBG2P69892 147 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 FBXL19-AS1Q494R0 122 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 COX19Q49B96 90 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 DNAL1Q4LDG9 190 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 ZCWPW2Q504Y3 356 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 OR10J3Q5JRS4 329 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 BRMS1LQ5PSV4 323 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 TTC33Q6PID6 262 aaPredicted RBP1.88□□□□□ -2.11
SCFD1-210ENST00000553693 TMEM205Q6UW68 189 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 FAM183BPQ6ZVS7 135 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 CYP4Z2PQ8N1L4 340 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 SLC25A29Q8N8R3 303 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 WFDC11Q8NEX6 87 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 OR2Y1Q8NGV0 311 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 FAM45AQ8TCE6 357 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 DTD1Q8TEA8 209 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 DDIT4LQ96D03 193 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 ZNF514Q96K75 400 aaPredicted RBP1.88□□□□□ -2.11
SCFD1-210ENST00000553693 FAAP24Q9BTP7 215 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 TAPBPLQ9BX59 468 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 SAMD10Q9BYL1 202 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 PLA2G12AQ9BZM1 189 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 SPANXB1Q9NS25 103 aaPredicted RBP1.88□□□□□ -2.11
SCFD1-210ENST00000553693 UBAP1Q9NZ09 502 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 USE1Q9NZ43 259 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 MAT2BQ9NZL9 334 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 CRCT1Q9UGL9 99 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 BTRCQ9Y297 605 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 NOSIPQ9Y314 301 aaKnown RBP1.88□□□□□ -2.11
SCFD1-210ENST00000553693 ATRQ13535 2644 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 FN1P02751 2386 aaKnown RBP1.88□□□□□ -2.11
SCFD1-210ENST00000553693 JMJD1CQ15652 2540 aa1.88□□□□□ -2.11
SCFD1-210ENST00000553693 NSD1Q96L73 2696 aaPredicted RBP1.88□□□□□ -2.11
SCFD1-210ENST00000553693 MDC1Q14676 2089 aaKnown RBP1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 177.2 ms