RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 ST6GALNAC5Q9BVH7 336 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 TMEM138Q9NPI0 162 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 RNF150Q9ULK6 438 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 ING4Q9UNL4 249 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 ZNF785A8K8V0 405 aa5.46□□□□□ -1.54
ATXN3-219ENST00000553488 MCRIP1C9JLW8 97 aa5.46□□□□□ -1.54
ATXN3-219ENST00000553488 CA11O75493 328 aa5.46□□□□□ -1.54
ATXN3-219ENST00000553488 RBMXL2O75526 392 aaKnown RBP5.46□□□□□ -1.54
ATXN3-219ENST00000553488 RBBP9O75884 186 aa5.46□□□□□ -1.54
ATXN3-219ENST00000553488 OR2A4O95047 310 aa5.46□□□□□ -1.54
ATXN3-219ENST00000553488 MAS1P04201 325 aa5.46□□□□□ -1.54
ATXN3-219ENST00000553488 IGFBP3P17936 291 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-219ENST00000553488 GABRB1P18505 474 aa5.46□□□□□ -1.54
ATXN3-219ENST00000553488 BDKRB2P30411 391 aa5.46□□□□□ -1.54
ATXN3-219ENST00000553488 GTF2A1P52655 376 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-219ENST00000553488 SNRPGP62308 76 aaKnown RBP5.46□□□□□ -1.54
ATXN3-219ENST00000553488 NHLH2Q02577 135 aa5.46□□□□□ -1.54
ATXN3-219ENST00000553488 MRPL28Q13084 256 aaKnown RBP5.46□□□□□ -1.54
ATXN3-219ENST00000553488 DYRK1AQ13627 763 aa5.46□□□□□ -1.54
ATXN3-219ENST00000553488 PLGLAQ15195 96 aa5.46□□□□□ -1.54
ATXN3-219ENST00000553488 PSG5Q15238 335 aa5.46□□□□□ -1.54
ATXN3-219ENST00000553488 HMGN3Q15651 99 aa5.46□□□□□ -1.54
ATXN3-219ENST00000553488 RPL39P5Q59GN2 51 aa5.46□□□□□ -1.54
ATXN3-219ENST00000553488 DMKNQ6E0U4 476 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-219ENST00000553488 ZNF343Q6P1L6 599 aa5.46□□□□□ -1.54
ATXN3-219ENST00000553488 GLDNQ6ZMI3 551 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-219ENST00000553488 OR2AK2Q8NG84 335 aa5.46□□□□□ -1.54
ATXN3-219ENST00000553488 TRUB1Q8WWH5 349 aaKnown RBP5.46□□□□□ -1.54
ATXN3-219ENST00000553488 MRPS24Q96EL2 167 aaKnown RBP5.46□□□□□ -1.54
ATXN3-219ENST00000553488 CLCC1Q96S66 551 aa5.46□□□□□ -1.54
ATXN3-219ENST00000553488 ZNF184Q99676 751 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-219ENST00000553488 NEURL2Q9BR09 285 aa5.46□□□□□ -1.54
ATXN3-219ENST00000553488 PARP12Q9H0J9 701 aaKnown RBP5.46□□□□□ -1.54
ATXN3-219ENST00000553488 SRD5A3Q9H8P0 318 aa5.46□□□□□ -1.54
ATXN3-219ENST00000553488 ZC4H2Q9NQZ6 224 aa5.46□□□□□ -1.54
ATXN3-219ENST00000553488 PAK1IP1Q9NWT1 392 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-219ENST00000553488 AASSQ9UDR5 926 aa5.46□□□□□ -1.54
ATXN3-219ENST00000553488 SLC23A1Q9UHI7 598 aa5.46□□□□□ -1.54
ATXN3-219ENST00000553488 DMRT1Q9Y5R6 373 aa5.46□□□□□ -1.54
ATXN3-219ENST00000553488 A0A0G2JLM5 398 aa5.45□□□□□ -1.54
ATXN3-219ENST00000553488 C13orf42A0A1B0GVH6 325 aa5.45□□□□□ -1.54
ATXN3-219ENST00000553488 NUPR2A6NF83 97 aa5.45□□□□□ -1.54
ATXN3-219ENST00000553488 FAM90A7PA6NKC0 464 aa5.45□□□□□ -1.54
ATXN3-219ENST00000553488 FAM90A23PA8MXZ1 464 aa5.45□□□□□ -1.54
ATXN3-219ENST00000553488 DEDDO75618 318 aa5.45□□□□□ -1.54
ATXN3-219ENST00000553488 TPPPO94811 219 aa5.45□□□□□ -1.54
ATXN3-219ENST00000553488 SPDEFO95238 335 aa5.45□□□□□ -1.54
ATXN3-219ENST00000553488 IGKV1-16P04430 117 aa5.45□□□□□ -1.54
ATXN3-219ENST00000553488 CD2P06729 351 aa5.45□□□□□ -1.54
ATXN3-219ENST00000553488 FASP25445 335 aa5.45□□□□□ -1.54
ATXN3-219ENST00000553488 PPP3R1P63098 170 aa5.45□□□□□ -1.54
ATXN3-219ENST00000553488 RIPK1Q13546 671 aa5.45□□□□□ -1.54
ATXN3-219ENST00000553488 PMS2P11Q13670 270 aa5.45□□□□□ -1.54
ATXN3-219ENST00000553488 CD300EQ496F6 205 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-219ENST00000553488 DNAL1Q4LDG9 190 aa5.45□□□□□ -1.54
ATXN3-219ENST00000553488 MEDAGQ5VYS4 303 aa5.45□□□□□ -1.54
ATXN3-219ENST00000553488 CFAP161Q6P656 301 aa5.45□□□□□ -1.54
ATXN3-219ENST00000553488 C16orf54Q6UWD8 224 aa5.45□□□□□ -1.54
ATXN3-219ENST00000553488 AMIGO2Q86SJ2 522 aa5.45□□□□□ -1.54
ATXN3-219ENST00000553488 OR13C5Q8NGS8 318 aa5.45□□□□□ -1.54
ATXN3-219ENST00000553488 GRPEL2Q8TAA5 225 aa5.45□□□□□ -1.54
ATXN3-219ENST00000553488 GPR148Q8TDV2 347 aa5.45□□□□□ -1.54
ATXN3-219ENST00000553488 GATAD1Q8WUU5 269 aa5.45□□□□□ -1.54
ATXN3-219ENST00000553488 GHSRQ92847 366 aa5.45□□□□□ -1.54
ATXN3-219ENST00000553488 MRPL48Q96GC5 212 aaKnown RBP5.45□□□□□ -1.54
ATXN3-219ENST00000553488 S100A13Q99584 98 aa5.45□□□□□ -1.54
ATXN3-219ENST00000553488 RNF5Q99942 180 aa5.45□□□□□ -1.54
ATXN3-219ENST00000553488 OVOL2Q9BRP0 275 aa5.45□□□□□ -1.54
ATXN3-219ENST00000553488 AGMATQ9BSE5 352 aa5.45□□□□□ -1.54
ATXN3-219ENST00000553488 TINAGL1Q9GZM7 467 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-219ENST00000553488 AKIP1Q9NQ31 210 aa5.45□□□□□ -1.54
ATXN3-219ENST00000553488 IMPAD1Q9NX62 359 aa5.45□□□□□ -1.54
ATXN3-219ENST00000553488 METTL1Q9UBP6 276 aaKnown RBP5.45□□□□□ -1.54
ATXN3-219ENST00000553488 PEF1Q9UBV8 284 aaKnown RBP5.45□□□□□ -1.54
ATXN3-219ENST00000553488 WASHC3Q9Y3C0 194 aa5.45□□□□□ -1.54
ATXN3-219ENST00000553488 PEX16Q9Y5Y5 336 aa5.45□□□□□ -1.54
ATXN3-219ENST00000553488 TRAV8-7A0A075B6U6 113 aa5.44□□□□□ -1.54
ATXN3-219ENST00000553488 TRBV5-5A0A0J9YX44 114 aa5.44□□□□□ -1.54
ATXN3-219ENST00000553488 CXorf65A6NEN9 183 aa5.44□□□□□ -1.54
ATXN3-219ENST00000553488 H3BNX3 289 aa5.44□□□□□ -1.54
ATXN3-219ENST00000553488 BMPR1BO00238 502 aa5.44□□□□□ -1.54
ATXN3-219ENST00000553488 RAB29O14966 203 aa5.44□□□□□ -1.54
ATXN3-219ENST00000553488 SLC22A1O15245 554 aa5.44□□□□□ -1.54
ATXN3-219ENST00000553488 PROP1O75360 226 aa5.44□□□□□ -1.54
ATXN3-219ENST00000553488 GPX5O75715 221 aa5.44□□□□□ -1.54
ATXN3-219ENST00000553488 CNIH1O95406 144 aa5.44□□□□□ -1.54
ATXN3-219ENST00000553488 IGLV2-23P01705 113 aa5.44□□□□□ -1.54
ATXN3-219ENST00000553488 GLAP06280 429 aa5.44□□□□□ -1.54
ATXN3-219ENST00000553488 LIMS3P0CW19 117 aa5.44□□□□□ -1.54
ATXN3-219ENST00000553488 LIMS4P0CW20 117 aa5.44□□□□□ -1.54
ATXN3-219ENST00000553488 MGMTP16455 207 aa5.44□□□□□ -1.54
ATXN3-219ENST00000553488 EDN2P20800 178 aa5.44□□□□□ -1.54
ATXN3-219ENST00000553488 FUT3P21217 361 aa5.44□□□□□ -1.54
ATXN3-219ENST00000553488 AADACP22760 399 aa5.44□□□□□ -1.54
ATXN3-219ENST00000553488 CD40LGP29965 261 aa5.44□□□□□ -1.54
ATXN3-219ENST00000553488 GBX2P52951 348 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-219ENST00000553488 FXYD3Q14802 87 aa5.44□□□□□ -1.54
ATXN3-219ENST00000553488 RPEL1Q2QD12 228 aa5.44□□□□□ -1.54
ATXN3-219ENST00000553488 FAM209BQ5JX69 171 aa5.44□□□□□ -1.54
ATXN3-219ENST00000553488 MZT2BQ6NZ67 158 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms