RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 SLURP1P55000 103 aa9.87□□□□□ -0.83
LINC00643-202ENST00000553426 TPPP2P59282 170 aa9.87□□□□□ -0.83
LINC00643-202ENST00000553426 PITPNAQ00169 270 aa9.87□□□□□ -0.83
LINC00643-202ENST00000553426 TAGLNQ01995 201 aaKnown RBP9.87□□□□□ -0.83
LINC00643-202ENST00000553426 FXYD3Q14802 87 aa9.87□□□□□ -0.83
LINC00643-202ENST00000553426 C19orf54Q5BKX5 351 aa9.87□□□□□ -0.83
LINC00643-202ENST00000553426 OR10J5Q8NHC4 309 aa9.87□□□□□ -0.83
LINC00643-202ENST00000553426 CASTOR1Q8WTX7 329 aa9.87□□□□□ -0.83
LINC00643-202ENST00000553426 NRG4Q8WWG1 115 aa9.87□□□□□ -0.83
LINC00643-202ENST00000553426 DLX4Q92988 240 aaPredicted RBP9.87□□□□□ -0.83
LINC00643-202ENST00000553426 MS4A10Q96PG2 267 aa9.87□□□□□ -0.83
LINC00643-202ENST00000553426 OR4C12Q96R67 309 aa9.87□□□□□ -0.83
LINC00643-202ENST00000553426 FAM103A1Q9BTL3 118 aaKnown RBP9.87□□□□□ -0.83
LINC00643-202ENST00000553426 ELOVL1Q9BW60 279 aa9.87□□□□□ -0.83
LINC00643-202ENST00000553426 RBM7Q9Y580 266 aaKnown RBP9.87□□□□□ -0.83
LINC00643-202ENST00000553426 IGHV4OR15-8A0A075B7B6 117 aa9.86□□□□□ -0.83
LINC00643-202ENST00000553426 A0A087WW49 117 aa9.86□□□□□ -0.83
LINC00643-202ENST00000553426 TMEM272A0A1B0GTI8 110 aa9.86□□□□□ -0.83
LINC00643-202ENST00000553426 C13orf42A0A1B0GVH6 325 aa9.86□□□□□ -0.83
LINC00643-202ENST00000553426 METTL21EPA6NDL7 271 aa9.86□□□□□ -0.83
LINC00643-202ENST00000553426 M0R1X1 148 aa9.86□□□□□ -0.83
LINC00643-202ENST00000553426 BET1O15155 118 aa9.86□□□□□ -0.83
LINC00643-202ENST00000553426 SLC25A17O43808 307 aa9.86□□□□□ -0.83
LINC00643-202ENST00000553426 IGHV3-11P01762 117 aa9.86□□□□□ -0.83
LINC00643-202ENST00000553426 TRGV3P03979 118 aa9.86□□□□□ -0.83
LINC00643-202ENST00000553426 IGKV1-16P04430 117 aa9.86□□□□□ -0.83
LINC00643-202ENST00000553426 EGR2P11161 476 aaPredicted RBP9.86□□□□□ -0.83
LINC00643-202ENST00000553426 MYL9P24844 172 aa9.86□□□□□ -0.83
LINC00643-202ENST00000553426 LGALS7P47929 136 aa9.86□□□□□ -0.83
LINC00643-202ENST00000553426 FABP5Q01469 135 aa9.86□□□□□ -0.83
LINC00643-202ENST00000553426 PLAC9Q5JTB6 97 aa9.86□□□□□ -0.83
LINC00643-202ENST00000553426 HES5Q5TA89 166 aa9.86□□□□□ -0.83
LINC00643-202ENST00000553426 ZNF367Q7RTV3 350 aa9.86□□□□□ -0.83
LINC00643-202ENST00000553426 ZNF383Q8NA42 475 aa9.86□□□□□ -0.83
LINC00643-202ENST00000553426 GRPEL2Q8TAA5 225 aa9.86□□□□□ -0.83
LINC00643-202ENST00000553426 TMEM68Q96MH6 324 aa9.86□□□□□ -0.83
LINC00643-202ENST00000553426 ASCL2Q99929 193 aa9.86□□□□□ -0.83
LINC00643-202ENST00000553426 SLC35D1Q9NTN3 355 aa9.86□□□□□ -0.83
LINC00643-202ENST00000553426 GAB2Q9UQC2 676 aa9.86□□□□□ -0.83
LINC00643-202ENST00000553426 A0A075B6Q4 140 aa9.85□□□□□ -0.83
LINC00643-202ENST00000553426 TRAV1-2A0A0B4J238 106 aa9.85□□□□□ -0.83
LINC00643-202ENST00000553426 IGKV1-6A0A0C4DH72 117 aa9.85□□□□□ -0.83
LINC00643-202ENST00000553426 A0A0G2JLM5 398 aa9.85□□□□□ -0.83
LINC00643-202ENST00000553426 DIRAS3O95661 229 aa9.85□□□□□ -0.83
LINC00643-202ENST00000553426 RRASP10301 218 aa9.85□□□□□ -0.83
LINC00643-202ENST00000553426 TALDO1P37837 337 aa9.85□□□□□ -0.83
LINC00643-202ENST00000553426 MAP2K4P45985 399 aa9.85□□□□□ -0.83
LINC00643-202ENST00000553426 RTL8BQ17RB0 113 aa9.85□□□□□ -0.83
LINC00643-202ENST00000553426 ACSM6Q6P461 480 aa9.85□□□□□ -0.83
LINC00643-202ENST00000553426 POC5Q8NA72 575 aa9.85□□□□□ -0.83
LINC00643-202ENST00000553426 OR10R2Q8NGX6 335 aa9.85□□□□□ -0.83
LINC00643-202ENST00000553426 GINS4Q9BRT9 223 aa9.85□□□□□ -0.83
LINC00643-202ENST00000553426 OR2D2Q9H210 308 aa9.85□□□□□ -0.83
LINC00643-202ENST00000553426 RANGRFQ9HD47 186 aaPredicted RBP9.85□□□□□ -0.83
LINC00643-202ENST00000553426 SORL1Q92673 2214 aa9.84□□□□□ -0.83
LINC00643-202ENST00000553426 H3BUA1 57 aa9.84□□□□□ -0.83
LINC00643-202ENST00000553426 LDLRAD4O15165 306 aa9.84□□□□□ -0.83
LINC00643-202ENST00000553426 SHOXO15266 292 aa9.84□□□□□ -0.83
LINC00643-202ENST00000553426 PROP1O75360 226 aa9.84□□□□□ -0.83
LINC00643-202ENST00000553426 FCGR3AP08637 254 aa9.84□□□□□ -0.83
LINC00643-202ENST00000553426 GP9P14770 177 aa9.84□□□□□ -0.83
LINC00643-202ENST00000553426 RAB6AP20340 208 aa9.84□□□□□ -0.83
LINC00643-202ENST00000553426 ZP3P21754 424 aa9.84□□□□□ -0.83
LINC00643-202ENST00000553426 ARFRP1Q13795 201 aa9.84□□□□□ -0.83
LINC00643-202ENST00000553426 ARL6IP1Q15041 203 aa9.84□□□□□ -0.83
LINC00643-202ENST00000553426 TBCEQ15813 527 aaPredicted RBP9.84□□□□□ -0.83
LINC00643-202ENST00000553426 MOGAT2Q3SYC2 334 aa9.84□□□□□ -0.83
LINC00643-202ENST00000553426 RHOVQ96L33 236 aa9.84□□□□□ -0.83
LINC00643-202ENST00000553426 CNBD2Q96M20 576 aa9.84□□□□□ -0.83
LINC00643-202ENST00000553426 HARBI1Q96MB7 349 aa9.84□□□□□ -0.83
LINC00643-202ENST00000553426 TPSG1Q9NRR2 321 aa9.84□□□□□ -0.83
LINC00643-202ENST00000553426 TRBV6-7A0A0A0MS04 114 aa9.83□□□□□ -0.84
LINC00643-202ENST00000553426 IFITM5A6NNB3 132 aa9.83□□□□□ -0.84
LINC00643-202ENST00000553426 GSTT2P0CG29 244 aa9.83□□□□□ -0.84
LINC00643-202ENST00000553426 GSTT2BP0CG30 244 aa9.83□□□□□ -0.84
LINC00643-202ENST00000553426 SPNP16150 400 aa9.83□□□□□ -0.84
LINC00643-202ENST00000553426 GNB3P16520 340 aa9.83□□□□□ -0.84
LINC00643-202ENST00000553426 RAB3BP20337 219 aa9.83□□□□□ -0.84
LINC00643-202ENST00000553426 LINC00205P59089 165 aa9.83□□□□□ -0.84
LINC00643-202ENST00000553426 IGSF11Q5DX21 431 aa9.83□□□□□ -0.84
LINC00643-202ENST00000553426 IZUMO2Q6UXV1 221 aa9.83□□□□□ -0.84
LINC00643-202ENST00000553426 ANKRD13BQ86YJ7 626 aa9.83□□□□□ -0.84
LINC00643-202ENST00000553426 OR5T1Q8NG75 326 aa9.83□□□□□ -0.84
LINC00643-202ENST00000553426 ADTRPQ96IZ2 230 aa9.83□□□□□ -0.84
LINC00643-202ENST00000553426 CABLES2Q9BTV7 478 aa9.83□□□□□ -0.84
LINC00643-202ENST00000553426 SDHAF2Q9NX18 166 aa9.83□□□□□ -0.84
LINC00643-202ENST00000553426 STUB1Q9UNE7 303 aa9.83□□□□□ -0.84
LINC00643-202ENST00000553426 KCNK7Q9Y2U2 307 aa9.83□□□□□ -0.84
LINC00643-202ENST00000553426 TRDV1A0A1B0GX56 115 aa9.82□□□□□ -0.84
LINC00643-202ENST00000553426 C3orf84H3BNL1 204 aa9.82□□□□□ -0.84
LINC00643-202ENST00000553426 HIST1H1DP16402 221 aaKnown RBP9.82□□□□□ -0.84
LINC00643-202ENST00000553426 AADACP22760 399 aa9.82□□□□□ -0.84
LINC00643-202ENST00000553426 TATDN3Q17R31 274 aa9.82□□□□□ -0.84
LINC00643-202ENST00000553426 VMA21Q3ZAQ7 101 aa9.82□□□□□ -0.84
LINC00643-202ENST00000553426 PHB2Q99623 299 aa9.82□□□□□ -0.84
LINC00643-202ENST00000553426 RSRP1Q9BUV0 290 aa9.82□□□□□ -0.84
LINC00643-202ENST00000553426 ZMAT4Q9H898 229 aa9.82□□□□□ -0.84
LINC00643-202ENST00000553426 NDUFB11Q9NX14 153 aa9.82□□□□□ -0.84
LINC00643-202ENST00000553426 ZNF230Q9UIE0 474 aaPredicted RBP9.82□□□□□ -0.84
LINC00643-202ENST00000553426 RAB27BO00194 218 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms