RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 CROCCP3Q8IVE0 287 aa15.07■□□□□ 0
PTCH1-227ENST00000553256 SLC25A46Q96AG3 418 aa15.07■□□□□ 0
PTCH1-227ENST00000553256 ST6GALNAC5Q9BVH7 336 aa15.07■□□□□ 0
PTCH1-227ENST00000553256 FBXL15Q9H469 300 aa15.07■□□□□ 0
PTCH1-227ENST00000553256 VCX3AQ9NNX9 186 aa15.07■□□□□ 0
PTCH1-227ENST00000553256 ANXA10Q9UJ72 324 aa15.07■□□□□ 0
PTCH1-227ENST00000553256 TRAV18A0A075B6X5 111 aa15.06■□□□□ 0
PTCH1-227ENST00000553256 M0R1X1 148 aa15.06■□□□□ 0
PTCH1-227ENST00000553256 SLC6A1P30531 599 aa15.06■□□□□ 0
PTCH1-227ENST00000553256 THBS3P49746 956 aa15.06■□□□□ 0
PTCH1-227ENST00000553256 CX3CL1P78423 397 aa15.06■□□□□ 0
PTCH1-227ENST00000553256 GON7Q9BXV9 100 aa15.06■□□□□ 0
PTCH1-227ENST00000553256 ANAPC10Q9UM13 185 aa15.06■□□□□ 0
PTCH1-227ENST00000553256 IGKV1D-13A0A0B4J2D9 117 aa15.05■□□□□ -0
PTCH1-227ENST00000553256 SRRM4A7MD48 611 aaKnown RBP15.05■□□□□ -0
PTCH1-227ENST00000553256 LINC00473A8K010 186 aa15.05■□□□□ -0
PTCH1-227ENST00000553256 RRP9O43818 475 aaKnown RBP15.05■□□□□ -0
PTCH1-227ENST00000553256 SOX15O60248 233 aa15.05■□□□□ -0
PTCH1-227ENST00000553256 SPDEFO95238 335 aa15.05■□□□□ -0
PTCH1-227ENST00000553256 CTXN2P0C2S0 81 aa15.05■□□□□ -0
PTCH1-227ENST00000553256 IGKV1-13P0DP09 117 aa15.05■□□□□ -0
PTCH1-227ENST00000553256 PTHLHP12272 177 aa15.05■□□□□ -0
PTCH1-227ENST00000553256 DUTP33316 252 aaKnown RBP15.05■□□□□ -0
PTCH1-227ENST00000553256 CDX1P47902 265 aaPredicted RBP15.05■□□□□ -0
PTCH1-227ENST00000553256 CTF1Q16619 201 aa15.05■□□□□ -0
PTCH1-227ENST00000553256 ZNF660Q6AZW8 331 aaPredicted RBP15.05■□□□□ -0
PTCH1-227ENST00000553256 HOGA1Q86XE5 327 aa15.05■□□□□ -0
PTCH1-227ENST00000553256 MRPL41Q8IXM3 137 aaKnown RBP15.05■□□□□ -0
PTCH1-227ENST00000553256 GVQW1Q8N7I0 195 aa15.05■□□□□ -0
PTCH1-227ENST00000553256 SNAPC3Q92966 411 aa15.05■□□□□ -0
PTCH1-227ENST00000553256 NAA50Q9GZZ1 169 aaKnown RBP15.05■□□□□ -0
PTCH1-227ENST00000553256 KLK15Q9H2R5 256 aa15.05■□□□□ -0
PTCH1-227ENST00000553256 TPSG1Q9NRR2 321 aa15.05■□□□□ -0
PTCH1-227ENST00000553256 OR2W1Q9Y3N9 320 aa15.05■□□□□ -0
PTCH1-227ENST00000553256 NUBP2Q9Y5Y2 271 aa15.05■□□□□ -0
PTCH1-227ENST00000553256 XRCC3O43542 346 aa15.04■□□□□ -0
PTCH1-227ENST00000553256 ALDH3B2P48448 385 aa15.04■□□□□ -0
PTCH1-227ENST00000553256 GNG2P59768 71 aa15.04■□□□□ -0
PTCH1-227ENST00000553256 TMEM177Q53S58 311 aa15.04■□□□□ -0
PTCH1-227ENST00000553256 C8orf86Q6ZUL3 223 aa15.04■□□□□ -0
PTCH1-227ENST00000553256 H7C2Y5 167 aa15.03■□□□□ -0
PTCH1-227ENST00000553256 GABARAPO95166 117 aa15.03■□□□□ -0
PTCH1-227ENST00000553256 PF4V1P10720 104 aa15.03■□□□□ -0
PTCH1-227ENST00000553256 NFYAP23511 347 aaPredicted RBP15.03■□□□□ -0
PTCH1-227ENST00000553256 BRWD1-AS2P59051 145 aa15.03■□□□□ -0
PTCH1-227ENST00000553256 VBP1P61758 197 aa15.03■□□□□ -0
PTCH1-227ENST00000553256 ZNF562Q6V9R5 426 aa15.03■□□□□ -0
PTCH1-227ENST00000553256 ANKRD13BQ86YJ7 626 aa15.03■□□□□ -0
PTCH1-227ENST00000553256 ZNF695Q8IW36 515 aa15.03■□□□□ -0
PTCH1-227ENST00000553256 KCTD12Q96CX2 325 aaKnown RBP15.03■□□□□ -0
PTCH1-227ENST00000553256 RAX2Q96IS3 184 aa15.03■□□□□ -0
PTCH1-227ENST00000553256 GINS4Q9BRT9 223 aa15.03■□□□□ -0
PTCH1-227ENST00000553256 SLC35D1Q9NTN3 355 aa15.03■□□□□ -0
PTCH1-227ENST00000553256 KIAA1456Q9P272 454 aa15.03■□□□□ -0
PTCH1-227ENST00000553256 WSB1Q9Y6I7 421 aa15.03■□□□□ -0
PTCH1-227ENST00000553256 TRAV41A0A0B4J266 112 aa15.02■□□□□ -0
PTCH1-227ENST00000553256 ARPC1BO15143 372 aaKnown RBP15.02■□□□□ -0
PTCH1-227ENST00000553256 OR5H8P0DN80 308 aa15.02■□□□□ -0
PTCH1-227ENST00000553256 IGLL1P15814 213 aa15.02■□□□□ -0
PTCH1-227ENST00000553256 VDAC1P21796 283 aa15.02■□□□□ -0
PTCH1-227ENST00000553256 MYCNOSP40205 109 aa15.02■□□□□ -0
PTCH1-227ENST00000553256 FHL3Q13643 280 aa15.02■□□□□ -0
PTCH1-227ENST00000553256 KHDC1LQ5JSQ8 128 aa15.02■□□□□ -0
PTCH1-227ENST00000553256 UBE2NLQ5JXB2 153 aa15.02■□□□□ -0
PTCH1-227ENST00000553256 ZNF645Q8N7E2 425 aa15.02■□□□□ -0
PTCH1-227ENST00000553256 FLYWCH2Q96CP2 140 aaKnown RBP15.02■□□□□ -0
PTCH1-227ENST00000553256 PARP11Q9NR21 331 aa15.02■□□□□ -0
PTCH1-227ENST00000553256 APOA2P02652 100 aa15.01□□□□□ -0.01
PTCH1-227ENST00000553256 RPL30P62888 115 aaKnown RBP15.01□□□□□ -0.01
PTCH1-227ENST00000553256 TAGLNQ01995 201 aaKnown RBP15.01□□□□□ -0.01
PTCH1-227ENST00000553256 OVCH2Q7RTZ1 564 aa15.01□□□□□ -0.01
PTCH1-227ENST00000553256 KLHL30-AS1Q8NEE0 82 aa15.01□□□□□ -0.01
PTCH1-227ENST00000553256 BEST4Q8NFU0 473 aa15.01□□□□□ -0.01
PTCH1-227ENST00000553256 TSNAXQ99598 290 aaKnown RBP15.01□□□□□ -0.01
PTCH1-227ENST00000553256 DIABLOQ9NR28 239 aa15.01□□□□□ -0.01
PTCH1-227ENST00000553256 METTL1Q9UBP6 276 aaKnown RBP15.01□□□□□ -0.01
PTCH1-227ENST00000553256 RBMX2Q9Y388 322 aaKnown RBP15.01□□□□□ -0.01
PTCH1-227ENST00000553256 DNAH9Q9NYC9 4486 aa15.01□□□□□ -0.01
PTCH1-227ENST00000553256 CA2P00918 260 aa15□□□□□ -0.01
PTCH1-227ENST00000553256 EIF4EP06730 217 aaKnown RBP15□□□□□ -0.01
PTCH1-227ENST00000553256 NAT1P18440 290 aa15□□□□□ -0.01
PTCH1-227ENST00000553256 LGALS7P47929 136 aa15□□□□□ -0.01
PTCH1-227ENST00000553256 RPS16P62249 146 aaKnown RBP15□□□□□ -0.01
PTCH1-227ENST00000553256 PJVKQ0ZLH3 352 aa15□□□□□ -0.01
PTCH1-227ENST00000553256 CXorf66Q5JRM2 361 aaPredicted RBP15□□□□□ -0.01
PTCH1-227ENST00000553256 SAMD12Q8N8I0 201 aa15□□□□□ -0.01
PTCH1-227ENST00000553256 ZNF491Q8N8L2 437 aa15□□□□□ -0.01
PTCH1-227ENST00000553256 BVESQ8NE79 360 aa15□□□□□ -0.01
PTCH1-227ENST00000553256 CMTM3Q96MX0 182 aa15□□□□□ -0.01
PTCH1-227ENST00000553256 TNCP24821 2201 aa15□□□□□ -0.01
PTCH1-227ENST00000553256 I3L521 148 aa14.99□□□□□ -0.01
PTCH1-227ENST00000553256 SLC25A17O43808 307 aa14.99□□□□□ -0.01
PTCH1-227ENST00000553256 PF4P02776 101 aa14.99□□□□□ -0.01
PTCH1-227ENST00000553256 LUMP51884 338 aaPredicted RBP14.99□□□□□ -0.01
PTCH1-227ENST00000553256 TAS2R20P59543 309 aa14.99□□□□□ -0.01
PTCH1-227ENST00000553256 RUNX1Q01196 453 aa14.99□□□□□ -0.01
PTCH1-227ENST00000553256 AKIRIN2Q53H80 203 aa14.99□□□□□ -0.01
PTCH1-227ENST00000553256 ASPHD1Q5U4P2 390 aa14.99□□□□□ -0.01
PTCH1-227ENST00000553256 PPP1R27Q86WC6 154 aa14.99□□□□□ -0.01
PTCH1-227ENST00000553256 C4orf3Q8WVX3 66 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms