RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 DUX4L5P0CJ88 424 aa8.06□□□□□ -1.12
TMEM116-216ENST00000552800 DUX4L6P0CJ89 424 aa8.06□□□□□ -1.12
TMEM116-216ENST00000552800 DUX4L7P0CJ90 424 aa8.06□□□□□ -1.12
TMEM116-216ENST00000552800 SELLP14151 372 aa8.06□□□□□ -1.12
TMEM116-216ENST00000552800 RPL12P30050 165 aaKnown RBP8.06□□□□□ -1.12
TMEM116-216ENST00000552800 EDDM3BP56851 147 aa8.06□□□□□ -1.12
TMEM116-216ENST00000552800 EIF5AP63241 154 aaKnown RBP8.06□□□□□ -1.12
TMEM116-216ENST00000552800 EXOSC2Q13868 293 aaKnown RBP8.06□□□□□ -1.12
TMEM116-216ENST00000552800 EDDM3AQ14507 147 aa8.06□□□□□ -1.12
TMEM116-216ENST00000552800 SMCO1Q147U7 214 aa8.06□□□□□ -1.12
TMEM116-216ENST00000552800 MIDNQ504T8 468 aa8.06□□□□□ -1.12
TMEM116-216ENST00000552800 DUX4L9Q6RFH8 374 aaPredicted RBP8.06□□□□□ -1.12
TMEM116-216ENST00000552800 LYPD2Q6UXB3 125 aa8.06□□□□□ -1.12
TMEM116-216ENST00000552800 Q6ZRM9 215 aa8.06□□□□□ -1.12
TMEM116-216ENST00000552800 Q6ZS46 218 aa8.06□□□□□ -1.12
TMEM116-216ENST00000552800 STPG2Q8N412 459 aa8.06□□□□□ -1.12
TMEM116-216ENST00000552800 BOLLQ8N9W6 283 aaKnown RBP8.06□□□□□ -1.12
TMEM116-216ENST00000552800 UBAC2Q8NBM4 344 aa8.06□□□□□ -1.12
TMEM116-216ENST00000552800 DEFB108BQ8NET1 73 aa8.06□□□□□ -1.12
TMEM116-216ENST00000552800 OR8H1Q8NGG4 311 aa8.06□□□□□ -1.12
TMEM116-216ENST00000552800 OR52E5Q8NH55 327 aa8.06□□□□□ -1.12
TMEM116-216ENST00000552800 RFESDQ8TAC1 157 aa8.06□□□□□ -1.12
TMEM116-216ENST00000552800 LRRC20Q8TCA0 184 aa8.06□□□□□ -1.12
TMEM116-216ENST00000552800 ST8SIA2Q92186 375 aa8.06□□□□□ -1.12
TMEM116-216ENST00000552800 ST6GALNAC6Q969X2 333 aa8.06□□□□□ -1.12
TMEM116-216ENST00000552800 SMIM8Q96KF7 97 aa8.06□□□□□ -1.12
TMEM116-216ENST00000552800 ZNF714Q96N38 554 aa8.06□□□□□ -1.12
TMEM116-216ENST00000552800 RAB40CQ96S21 281 aa8.06□□□□□ -1.12
TMEM116-216ENST00000552800 SLC25A32Q9H2D1 315 aa8.06□□□□□ -1.12
TMEM116-216ENST00000552800 HIPK2Q9H2X6 1198 aa8.06□□□□□ -1.12
TMEM116-216ENST00000552800 CHODLQ9H9P2 273 aa8.06□□□□□ -1.12
TMEM116-216ENST00000552800 TPSG1Q9NRR2 321 aa8.06□□□□□ -1.12
TMEM116-216ENST00000552800 DUX4Q9UBX2 424 aa8.06□□□□□ -1.12
TMEM116-216ENST00000552800 UBQLN2Q9UHD9 624 aa8.06□□□□□ -1.12
TMEM116-216ENST00000552800 RCL1Q9Y2P8 373 aaKnown RBP8.06□□□□□ -1.12
TMEM116-216ENST00000552800 KANTRA0A1W2PQU2 76 aa8.05□□□□□ -1.12
TMEM116-216ENST00000552800 LINC00473A8K010 186 aa8.05□□□□□ -1.12
TMEM116-216ENST00000552800 DVL1O14640 695 aa8.05□□□□□ -1.12
TMEM116-216ENST00000552800 ADAM20O43506 726 aa8.05□□□□□ -1.12
TMEM116-216ENST00000552800 GPR137BO60478 399 aa8.05□□□□□ -1.12
TMEM116-216ENST00000552800 JTBO76095 146 aa8.05□□□□□ -1.12
TMEM116-216ENST00000552800 PAX1P15863 534 aa8.05□□□□□ -1.12
TMEM116-216ENST00000552800 NUP62P37198 522 aaPredicted RBP8.05□□□□□ -1.12
TMEM116-216ENST00000552800 LPAR6P43657 344 aa8.05□□□□□ -1.12
TMEM116-216ENST00000552800 PAX9P55771 341 aa8.05□□□□□ -1.12
TMEM116-216ENST00000552800 TLE4Q04727 773 aa8.05□□□□□ -1.12
TMEM116-216ENST00000552800 SNTB1Q13884 538 aaKnown RBP8.05□□□□□ -1.12
TMEM116-216ENST00000552800 ZNF833PQ6ZTB9 187 aa8.05□□□□□ -1.12
TMEM116-216ENST00000552800 PUSL1Q8N0Z8 303 aaKnown RBP8.05□□□□□ -1.12
TMEM116-216ENST00000552800 PRR18Q8N4B5 295 aa8.05□□□□□ -1.12
TMEM116-216ENST00000552800 EIF4E3Q8N5X7 224 aaKnown RBP8.05□□□□□ -1.12
TMEM116-216ENST00000552800 OR51H1Q8NH63 302 aa8.05□□□□□ -1.12
TMEM116-216ENST00000552800 RAB1CQ92928 201 aa8.05□□□□□ -1.12
TMEM116-216ENST00000552800 ABHD14AQ9BUJ0 271 aa8.05□□□□□ -1.12
TMEM116-216ENST00000552800 UNKLQ9H9P5 680 aaKnown RBP8.05□□□□□ -1.12
TMEM116-216ENST00000552800 LYRM2Q9NU23 88 aaPredicted RBP8.05□□□□□ -1.12
TMEM116-216ENST00000552800 GSKIPQ9P0R6 139 aa8.05□□□□□ -1.12
TMEM116-216ENST00000552800 GNG12Q9UBI6 72 aa8.05□□□□□ -1.12
TMEM116-216ENST00000552800 HSPB7Q9UBY9 170 aa8.05□□□□□ -1.12
TMEM116-216ENST00000552800 RBM7Q9Y580 266 aaKnown RBP8.05□□□□□ -1.12
TMEM116-216ENST00000552800 MALRD1Q5VYJ5 2156 aa8.05□□□□□ -1.12
TMEM116-216ENST00000552800 CFAP46Q8IYW2 2715 aa8.05□□□□□ -1.12
TMEM116-216ENST00000552800 A0A0G2JRQ6 117 aa8.04□□□□□ -1.12
TMEM116-216ENST00000552800 MSGN1A6NI15 193 aa8.04□□□□□ -1.12
TMEM116-216ENST00000552800 C19orf84I3L1E1 186 aa8.04□□□□□ -1.12
TMEM116-216ENST00000552800 FGF16O43320 207 aa8.04□□□□□ -1.12
TMEM116-216ENST00000552800 TNFSF12O43508 249 aa8.04□□□□□ -1.12
TMEM116-216ENST00000552800 TSC22D2O75157 780 aa8.04□□□□□ -1.12
TMEM116-216ENST00000552800 PVALBP20472 110 aaPredicted RBP8.04□□□□□ -1.12
TMEM116-216ENST00000552800 S100A1P23297 94 aa8.04□□□□□ -1.12
TMEM116-216ENST00000552800 GPR12P47775 334 aa8.04□□□□□ -1.12
TMEM116-216ENST00000552800 THBS3P49746 956 aa8.04□□□□□ -1.12
TMEM116-216ENST00000552800 EFNA4P52798 201 aa8.04□□□□□ -1.12
TMEM116-216ENST00000552800 BAXQ07812 192 aa8.04□□□□□ -1.12
TMEM116-216ENST00000552800 ZNF273Q14593 569 aa8.04□□□□□ -1.12
TMEM116-216ENST00000552800 NCR3LG1Q68D85 454 aa8.04□□□□□ -1.12
TMEM116-216ENST00000552800 DHRS7BQ6IAN0 325 aaPredicted RBP8.04□□□□□ -1.12
TMEM116-216ENST00000552800 FAM53AQ6NSI3 398 aaPredicted RBP8.04□□□□□ -1.12
TMEM116-216ENST00000552800 MEX3BQ6ZN04 569 aaKnown RBP8.04□□□□□ -1.12
TMEM116-216ENST00000552800 ZNF429Q86V71 674 aa8.04□□□□□ -1.12
TMEM116-216ENST00000552800 BAP18Q8IXM2 172 aa8.04□□□□□ -1.12
TMEM116-216ENST00000552800 SPAG16Q8N0X2 631 aa8.04□□□□□ -1.12
TMEM116-216ENST00000552800 ZNF843Q8N446 348 aa8.04□□□□□ -1.12
TMEM116-216ENST00000552800 OR2C3Q8N628 320 aa8.04□□□□□ -1.12
TMEM116-216ENST00000552800 OR5AN1Q8NGI8 311 aa8.04□□□□□ -1.12
TMEM116-216ENST00000552800 DCUN1D4Q92564 292 aa8.04□□□□□ -1.12
TMEM116-216ENST00000552800 TMEM186Q96B77 213 aa8.04□□□□□ -1.12
TMEM116-216ENST00000552800 BBC3Q96PG8 261 aaPredicted RBP8.04□□□□□ -1.12
TMEM116-216ENST00000552800 AIFM2Q9BRQ8 373 aa8.04□□□□□ -1.12
TMEM116-216ENST00000552800 PCGF1Q9BSM1 259 aa8.04□□□□□ -1.12
TMEM116-216ENST00000552800 SSBP4Q9BWG4 385 aaPredicted RBP8.04□□□□□ -1.12
TMEM116-216ENST00000552800 PATZ1Q9HBE1 687 aaKnown RBP8.04□□□□□ -1.12
TMEM116-216ENST00000552800 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.04□□□□□ -1.12
TMEM116-216ENST00000552800 C19orf12Q9NSK7 152 aa8.04□□□□□ -1.12
TMEM116-216ENST00000552800 PSG11Q9UQ72 335 aa8.04□□□□□ -1.12
TMEM116-216ENST00000552800 POLR3KQ9Y2Y1 108 aaPredicted RBP8.04□□□□□ -1.12
TMEM116-216ENST00000552800 PRELID3BQ9Y3B1 194 aa8.04□□□□□ -1.12
TMEM116-216ENST00000552800 DOPEY1Q5JWR5 2465 aa8.04□□□□□ -1.12
TMEM116-216ENST00000552800 ARID1AO14497 2285 aa8.03□□□□□ -1.12
TMEM116-216ENST00000552800 A0A1W2PPH5 198 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms