RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 GLP1RP43220 463 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 ALDH3B2P48448 385 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 GSSP48637 474 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 SLC1A6P48664 564 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 GNG10P50151 68 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 TMEM187Q14656 261 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 MED22Q15528 200 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 TAF13Q15543 124 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 UBE2V2Q15819 145 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 CYBRD1Q53TN4 286 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 CT45A1Q5HYN5 189 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 TTC32Q5I0X7 151 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 KRBOX4Q5JUW0 171 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 ATAD3CQ5T2N8 411 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 GLT8D1Q68CQ7 371 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 ELP2Q6IA86 826 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 OR4A47Q6IF82 309 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 RPL13AP3Q6NVV1 102 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 ERICH5Q6P6B1 374 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 ZNF833PQ6ZTB9 187 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 SLC25A26Q70HW3 274 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 ZNF554Q86TJ5 538 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 ELMOD2Q8IZ81 293 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 C15orf53Q8NAA6 179 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 SPC24Q8NBT2 197 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 ADAD2Q8NCV1 583 aaKnown RBP1.56□□□□□ -2.16
PTCH1-223ENST00000551623 MNS1Q8NEH6 495 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 CCDC54Q8NEL0 328 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 PROKR2Q8NFJ6 384 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 DMBX1Q8NFW5 382 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 OR52J3Q8NH60 311 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 CT45A3Q8NHU0 189 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 FAM81AQ8TBF8 368 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 FANK1Q8TC84 345 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 OR51E1Q8TCB6 317 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 CD300LFQ8TDQ1 290 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 SLC26A7Q8TE54 656 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 FCAMRQ8WWV6 532 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 IFT81Q8WYA0 676 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 PP6455Q8WZ26 134 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 LZICQ8WZA0 190 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 SLAMF9Q96A28 289 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 MS4A10Q96PG2 267 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 OR52B2Q96RD2 323 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 INTS14Q96SY0 518 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 CNN2Q99439 309 aaKnown RBP1.56□□□□□ -2.16
PTCH1-223ENST00000551623 TEAD3Q99594 435 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 ZNF251Q9BRH9 671 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 NICN1Q9BSH3 213 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 FNDC11Q9BVV2 318 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 C6orf62Q9GZU0 229 aaPredicted RBP1.56□□□□□ -2.16
PTCH1-223ENST00000551623 PBOV1Q9GZY1 135 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 MOB1AQ9H8S9 216 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 GPR84Q9NQS5 396 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 IL20Q9NYY1 176 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 DNAJC27Q9NZQ0 273 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 MRPL27Q9P0M9 148 aaKnown RBP1.56□□□□□ -2.16
PTCH1-223ENST00000551623 PRO0461Q9UI25 63 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 CELA1Q9UNI1 258 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 SAMD4AQ9UPU9 718 aaKnown RBP1.56□□□□□ -2.16
PTCH1-223ENST00000551623 MUC2Q02817 5179 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 NACAE9PAV3 2078 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 DNAH5Q8TE73 4624 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 MEIKINA0A087WXM9 373 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 IGKV1-9A0A0C4DH69 117 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 TMEM269A0A1B0GVZ9 245 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 SMIM23A6NLE4 172 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 SIRPB1O00241 398 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 SLC22A1O15245 554 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 DEFB4AO15263 64 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 SLC31A2O15432 143 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 SULT1B1O43704 296 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 SNX3O60493 162 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 GGCTO75223 188 aaKnown RBP1.55□□□□□ -2.16
PTCH1-223ENST00000551623 GMNNO75496 209 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 GATBO75879 557 aaKnown RBP1.55□□□□□ -2.16
PTCH1-223ENST00000551623 FADS2O95864 444 aaKnown RBP1.55□□□□□ -2.16
PTCH1-223ENST00000551623 IGHV3-7P01780 117 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 SHBGP04278 402 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 H1F0P07305 194 aaKnown RBP1.55□□□□□ -2.16
PTCH1-223ENST00000551623 CRYGBP07316 175 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 LYNP07948 512 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 CLUP10909 449 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 PRKACAP17612 351 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 BCL3P20749 454 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 MC5RP33032 325 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 ASIPP42127 132 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 OR3A3P47888 321 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 RBP2P50120 134 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 SLC18A1P54219 525 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 CMC4P56277 68 aaPredicted RBP1.55□□□□□ -2.16
PTCH1-223ENST00000551623 MTPNP58546 118 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 SEC61BP60468 96 aaKnown RBP1.55□□□□□ -2.16
PTCH1-223ENST00000551623 GNG11P61952 73 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 RPS27AP62979 156 aaKnown RBP1.55□□□□□ -2.16
PTCH1-223ENST00000551623 BNIP1Q12981 228 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 TSPAN31Q12999 210 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 PDZK1IP1Q13113 114 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 EXOSC2Q13868 293 aaKnown RBP1.55□□□□□ -2.16
PTCH1-223ENST00000551623 ATXN7L3Q14CW9 347 aaPredicted RBP1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms