RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 TAGLNQ01995 201 aaKnown RBP9.82□□□□□ -0.84
PTCH1-221ENST00000550914 HSD17B12Q53GQ0 312 aa9.82□□□□□ -0.84
PTCH1-221ENST00000550914 ZFAND6Q6FIF0 208 aa9.82□□□□□ -0.84
PTCH1-221ENST00000550914 HAPLN4Q86UW8 402 aa9.82□□□□□ -0.84
PTCH1-221ENST00000550914 DRAXINQ8NBI3 349 aaPredicted RBP9.82□□□□□ -0.84
PTCH1-221ENST00000550914 OR9G4Q8NGQ1 327 aa9.82□□□□□ -0.84
PTCH1-221ENST00000550914 GRPEL2Q8TAA5 225 aa9.82□□□□□ -0.84
PTCH1-221ENST00000550914 TMED9Q9BVK6 235 aa9.82□□□□□ -0.84
PTCH1-221ENST00000550914 ZNF355PQ9NSJ1 428 aa9.82□□□□□ -0.84
PTCH1-221ENST00000550914 SOCS1O15524 211 aa9.81□□□□□ -0.84
PTCH1-221ENST00000550914 CNIH1O95406 144 aa9.81□□□□□ -0.84
PTCH1-221ENST00000550914 CRYGBP07316 175 aa9.81□□□□□ -0.84
PTCH1-221ENST00000550914 SCTP09683 121 aa9.81□□□□□ -0.84
PTCH1-221ENST00000550914 ARSBP15848 533 aa9.81□□□□□ -0.84
PTCH1-221ENST00000550914 RANBP1P43487 201 aa9.81□□□□□ -0.84
PTCH1-221ENST00000550914 SSBP2P81877 361 aaPredicted RBP9.81□□□□□ -0.84
PTCH1-221ENST00000550914 HAGHQ16775 308 aa9.81□□□□□ -0.84
PTCH1-221ENST00000550914 TATDN3Q17R31 274 aa9.81□□□□□ -0.84
PTCH1-221ENST00000550914 IL34Q6ZMJ4 242 aa9.81□□□□□ -0.84
PTCH1-221ENST00000550914 CEACAM19Q7Z692 300 aa9.81□□□□□ -0.84
PTCH1-221ENST00000550914 GTSCR1Q86UQ5 136 aa9.81□□□□□ -0.84
PTCH1-221ENST00000550914 BPIFB6Q8NFQ5 453 aa9.81□□□□□ -0.84
PTCH1-221ENST00000550914 OR5T1Q8NG75 326 aa9.81□□□□□ -0.84
PTCH1-221ENST00000550914 USMG5Q96IX5 58 aa9.81□□□□□ -0.84
PTCH1-221ENST00000550914 HDHD3Q9BSH5 251 aaPredicted RBP9.81□□□□□ -0.84
PTCH1-221ENST00000550914 THAP7Q9BT49 309 aaPredicted RBP9.81□□□□□ -0.84
PTCH1-221ENST00000550914 TINAGL1Q9GZM7 467 aaPredicted RBP9.81□□□□□ -0.84
PTCH1-221ENST00000550914 KCNK15Q9H427 330 aa9.81□□□□□ -0.84
PTCH1-221ENST00000550914 SLC35D1Q9NTN3 355 aa9.81□□□□□ -0.84
PTCH1-221ENST00000550914 BIRC6Q9NR09 4857 aa9.8□□□□□ -0.84
PTCH1-221ENST00000550914 IGKV1-6A0A0C4DH72 117 aa9.8□□□□□ -0.84
PTCH1-221ENST00000550914 ANKRD34BA5PLL1 514 aa9.8□□□□□ -0.84
PTCH1-221ENST00000550914 TRDCB7Z8K6 153 aa9.8□□□□□ -0.84
PTCH1-221ENST00000550914 SLC17A2O00624 439 aa9.8□□□□□ -0.84
PTCH1-221ENST00000550914 DIRAS3O95661 229 aa9.8□□□□□ -0.84
PTCH1-221ENST00000550914 IGLV2-23P01705 113 aa9.8□□□□□ -0.84
PTCH1-221ENST00000550914 IFNA6P05013 189 aa9.8□□□□□ -0.84
PTCH1-221ENST00000550914 CDK1P06493 297 aa9.8□□□□□ -0.84
PTCH1-221ENST00000550914 SNRPBP14678 240 aaKnown RBP9.8□□□□□ -0.84
PTCH1-221ENST00000550914 TMEM50BP56557 158 aa9.8□□□□□ -0.84
PTCH1-221ENST00000550914 SPHARQ15513 63 aa9.8□□□□□ -0.84
PTCH1-221ENST00000550914 LCN12Q6JVE5 192 aa9.8□□□□□ -0.84
PTCH1-221ENST00000550914 ZNF343Q6P1L6 599 aa9.8□□□□□ -0.84
PTCH1-221ENST00000550914 Q8N402 240 aa9.8□□□□□ -0.84
PTCH1-221ENST00000550914 OR4A4PQ8NGN8 299 aa9.8□□□□□ -0.84
PTCH1-221ENST00000550914 CMSS1Q9BQ75 279 aaKnown RBP9.8□□□□□ -0.84
PTCH1-221ENST00000550914 GAR1Q9NY12 217 aaKnown RBP9.8□□□□□ -0.84
PTCH1-221ENST00000550914 RDH8Q9NYR8 311 aa9.8□□□□□ -0.84
PTCH1-221ENST00000550914 PEF1Q9UBV8 284 aaKnown RBP9.8□□□□□ -0.84
PTCH1-221ENST00000550914 LSM2Q9Y333 95 aaKnown RBP9.8□□□□□ -0.84
PTCH1-221ENST00000550914 ERICH4A6NGS2 130 aa9.79□□□□□ -0.84
PTCH1-221ENST00000550914 M0R1X1 148 aa9.79□□□□□ -0.84
PTCH1-221ENST00000550914 EBAG9O00559 213 aa9.79□□□□□ -0.84
PTCH1-221ENST00000550914 OR2A4O95047 310 aa9.79□□□□□ -0.84
PTCH1-221ENST00000550914 SYNJ2BPP57105 145 aa9.79□□□□□ -0.84
PTCH1-221ENST00000550914 LINC00205P59089 165 aa9.79□□□□□ -0.84
PTCH1-221ENST00000550914 PJVKQ0ZLH3 352 aa9.79□□□□□ -0.84
PTCH1-221ENST00000550914 CBX3Q13185 183 aa9.79□□□□□ -0.84
PTCH1-221ENST00000550914 TMEM177Q53S58 311 aa9.79□□□□□ -0.84
PTCH1-221ENST00000550914 OR56B1Q8NGI3 324 aa9.79□□□□□ -0.84
PTCH1-221ENST00000550914 OR2K2Q8NGT1 345 aa9.79□□□□□ -0.84
PTCH1-221ENST00000550914 ARHGAP5-AS1Q96IT6 56 aa9.79□□□□□ -0.84
PTCH1-221ENST00000550914 HARBI1Q96MB7 349 aa9.79□□□□□ -0.84
PTCH1-221ENST00000550914 PECRQ9BY49 303 aa9.79□□□□□ -0.84
PTCH1-221ENST00000550914 TUBA4BQ9H853 241 aa9.79□□□□□ -0.84
PTCH1-221ENST00000550914 PLGRKTQ9HBL7 147 aa9.79□□□□□ -0.84
PTCH1-221ENST00000550914 CSN3P07498 182 aa9.78□□□□□ -0.84
PTCH1-221ENST00000550914 RRASP10301 218 aa9.78□□□□□ -0.84
PTCH1-221ENST00000550914 MECP2P51608 486 aaKnown RBP9.78□□□□□ -0.84
PTCH1-221ENST00000550914 P2RY14Q15391 338 aa9.78□□□□□ -0.84
PTCH1-221ENST00000550914 TRAM1Q15629 374 aa9.78□□□□□ -0.84
PTCH1-221ENST00000550914 RAB11BQ15907 218 aa9.78□□□□□ -0.84
PTCH1-221ENST00000550914 BVESQ8NE79 360 aa9.78□□□□□ -0.84
PTCH1-221ENST00000550914 IL17DQ8TAD2 202 aa9.78□□□□□ -0.84
PTCH1-221ENST00000550914 UFD1Q92890 307 aa9.78□□□□□ -0.84
PTCH1-221ENST00000550914 SNAPC3Q92966 411 aa9.78□□□□□ -0.84
PTCH1-221ENST00000550914 GFI1Q99684 422 aa9.78□□□□□ -0.84
PTCH1-221ENST00000550914 CABLES2Q9BTV7 478 aa9.78□□□□□ -0.84
PTCH1-221ENST00000550914 CASQ2O14958 399 aaPredicted RBP9.77□□□□□ -0.85
PTCH1-221ENST00000550914 FABP7O15540 132 aa9.77□□□□□ -0.85
PTCH1-221ENST00000550914 AIREO43918 545 aa9.77□□□□□ -0.85
PTCH1-221ENST00000550914 ARL6IP5O75915 188 aa9.77□□□□□ -0.85
PTCH1-221ENST00000550914 PSMA1P25786 263 aaKnown RBP9.77□□□□□ -0.85
PTCH1-221ENST00000550914 MRPS15P82914 257 aaKnown RBP9.77□□□□□ -0.85
PTCH1-221ENST00000550914 DYRK1AQ13627 763 aa9.77□□□□□ -0.85
PTCH1-221ENST00000550914 MED22Q15528 200 aa9.77□□□□□ -0.85
PTCH1-221ENST00000550914 RTL8BQ17RB0 113 aa9.77□□□□□ -0.85
PTCH1-221ENST00000550914 RPEL1Q2QD12 228 aa9.77□□□□□ -0.85
PTCH1-221ENST00000550914 PLAC9Q5JTB6 97 aa9.77□□□□□ -0.85
PTCH1-221ENST00000550914 OGFRL1Q5TC84 451 aaPredicted RBP9.77□□□□□ -0.85
PTCH1-221ENST00000550914 LIPKQ5VXJ0 399 aa9.77□□□□□ -0.85
PTCH1-221ENST00000550914 LAX1Q8IWV1 398 aa9.77□□□□□ -0.85
PTCH1-221ENST00000550914 OR10J5Q8NHC4 309 aa9.77□□□□□ -0.85
PTCH1-221ENST00000550914 CENPOQ9BU64 300 aa9.77□□□□□ -0.85
PTCH1-221ENST00000550914 KRTAP3-3Q9BYR6 98 aa9.77□□□□□ -0.85
PTCH1-221ENST00000550914 KRTAP3-2Q9BYR7 98 aa9.77□□□□□ -0.85
PTCH1-221ENST00000550914 OR2D2Q9H210 308 aa9.77□□□□□ -0.85
PTCH1-221ENST00000550914 SDHAF2Q9NX18 166 aa9.77□□□□□ -0.85
PTCH1-221ENST00000550914 COA4Q9NYJ1 87 aa9.77□□□□□ -0.85
PTCH1-221ENST00000550914 PEMTQ9UBM1 199 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms