RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 EAF1Q96JC9 268 aaPredicted RBP17.18■□□□□ 0.34
NEK3-202ENST00000550841 HSD17B10Q99714 261 aaKnown RBP17.18■□□□□ 0.34
NEK3-202ENST00000550841 AKIP1Q9NQ31 210 aa17.18■□□□□ 0.34
NEK3-202ENST00000550841 CCL28Q9NRJ3 127 aa17.18■□□□□ 0.34
NEK3-202ENST00000550841 WASHC3Q9Y3C0 194 aa17.18■□□□□ 0.34
NEK3-202ENST00000550841 H0YJW9 148 aa17.17■□□□□ 0.34
NEK3-202ENST00000550841 H7C2Y5 167 aa17.17■□□□□ 0.34
NEK3-202ENST00000550841 M0QZK8 103 aa17.17■□□□□ 0.34
NEK3-202ENST00000550841 RRASP10301 218 aa17.17■□□□□ 0.34
NEK3-202ENST00000550841 S100GP29377 79 aa17.17■□□□□ 0.34
NEK3-202ENST00000550841 ECI1P42126 302 aa17.17■□□□□ 0.34
NEK3-202ENST00000550841 SRSF2Q01130 221 aaKnown RBP17.17■□□□□ 0.34
NEK3-202ENST00000550841 CBX3Q13185 183 aa17.17■□□□□ 0.34
NEK3-202ENST00000550841 ZNF66Q6ZN08 573 aa17.17■□□□□ 0.34
NEK3-202ENST00000550841 TMEM219Q86XT9 240 aa17.17■□□□□ 0.34
NEK3-202ENST00000550841 DRAXINQ8NBI3 349 aaPredicted RBP17.17■□□□□ 0.34
NEK3-202ENST00000550841 TRIM63Q969Q1 353 aa17.17■□□□□ 0.34
NEK3-202ENST00000550841 RNF5Q99942 180 aa17.17■□□□□ 0.34
NEK3-202ENST00000550841 SLC25A33Q9BSK2 321 aa17.17■□□□□ 0.34
NEK3-202ENST00000550841 C1RLQ9NZP8 487 aa17.17■□□□□ 0.34
NEK3-202ENST00000550841 PRELID3BQ9Y3B1 194 aa17.17■□□□□ 0.34
NEK3-202ENST00000550841 IGLV2-14P01704 120 aa17.16■□□□□ 0.34
NEK3-202ENST00000550841 DUTP33316 252 aaKnown RBP17.16■□□□□ 0.34
NEK3-202ENST00000550841 HNF4GQ14541 408 aa17.16■□□□□ 0.34
NEK3-202ENST00000550841 GLDNQ6ZMI3 551 aaPredicted RBP17.16■□□□□ 0.34
NEK3-202ENST00000550841 PDPNQ86YL7 162 aa17.16■□□□□ 0.34
NEK3-202ENST00000550841 CMTM1Q8IZ96 169 aa17.16■□□□□ 0.34
NEK3-202ENST00000550841 MFSD4AQ8N468 514 aa17.16■□□□□ 0.34
NEK3-202ENST00000550841 ZNF383Q8NA42 475 aa17.16■□□□□ 0.34
NEK3-202ENST00000550841 OR4D10Q8NGI6 311 aa17.16■□□□□ 0.34
NEK3-202ENST00000550841 OR4C16Q8NGL9 310 aa17.16■□□□□ 0.34
NEK3-202ENST00000550841 PRRT1Q99946 306 aa17.16■□□□□ 0.34
NEK3-202ENST00000550841 WDR12Q9GZL7 423 aaKnown RBP17.16■□□□□ 0.34
NEK3-202ENST00000550841 NPFFR1Q9GZQ6 430 aa17.16■□□□□ 0.34
NEK3-202ENST00000550841 SLC35D1Q9NTN3 355 aa17.16■□□□□ 0.34
NEK3-202ENST00000550841 SCP2D1Q9UJQ7 156 aa17.16■□□□□ 0.34
NEK3-202ENST00000550841 GPR31O00270 319 aa17.15■□□□□ 0.34
NEK3-202ENST00000550841 GNRHRP30968 328 aa17.15■□□□□ 0.34
NEK3-202ENST00000550841 KLF9Q13886 244 aaPredicted RBP17.15■□□□□ 0.34
NEK3-202ENST00000550841 ZNF846Q147U1 533 aa17.15■□□□□ 0.34
NEK3-202ENST00000550841 RTL8BQ17RB0 113 aa17.15■□□□□ 0.34
NEK3-202ENST00000550841 SCGB2B2Q4G0G5 96 aa17.15■□□□□ 0.34
NEK3-202ENST00000550841 ZNF57Q68EA5 555 aaPredicted RBP17.15■□□□□ 0.34
NEK3-202ENST00000550841 LHFPL1Q86WI0 220 aa17.15■□□□□ 0.34
NEK3-202ENST00000550841 SLC38A6Q8IZM9 456 aa17.15■□□□□ 0.34
NEK3-202ENST00000550841 BVESQ8NE79 360 aa17.15■□□□□ 0.34
NEK3-202ENST00000550841 MOB4Q9Y3A3 225 aa17.15■□□□□ 0.34
NEK3-202ENST00000550841 ZNF735P0CB33 412 aa17.14■□□□□ 0.33
NEK3-202ENST00000550841 CD40LGP29965 261 aa17.14■□□□□ 0.33
NEK3-202ENST00000550841 PPP5CP53041 499 aa17.14■□□□□ 0.33
NEK3-202ENST00000550841 CATR1Q13166 79 aa17.14■□□□□ 0.33
NEK3-202ENST00000550841 BAK1Q16611 211 aa17.14■□□□□ 0.33
NEK3-202ENST00000550841 KRTAP24-1Q3LI83 254 aa17.14■□□□□ 0.33
NEK3-202ENST00000550841 AADACL3Q5VUY0 350 aa17.14■□□□□ 0.33
NEK3-202ENST00000550841 ZNF818PQ6ZRF7 136 aa17.14■□□□□ 0.33
NEK3-202ENST00000550841 Q8N6K4 173 aa17.14■□□□□ 0.33
NEK3-202ENST00000550841 ZFAND1Q8TCF1 268 aa17.14■□□□□ 0.33
NEK3-202ENST00000550841 FLYWCH2Q96CP2 140 aaKnown RBP17.14■□□□□ 0.33
NEK3-202ENST00000550841 C5orf30Q96GV9 206 aa17.14■□□□□ 0.33
NEK3-202ENST00000550841 SDHCQ99643 169 aaPredicted RBP17.14■□□□□ 0.33
NEK3-202ENST00000550841 CCDC32Q9BV29 185 aa17.14■□□□□ 0.33
NEK3-202ENST00000550841 FXYD6Q9H0Q3 95 aa17.14■□□□□ 0.33
NEK3-202ENST00000550841 RANBP3Q9H6Z4 567 aaPredicted RBP17.14■□□□□ 0.33
NEK3-202ENST00000550841 MCUBQ9NWR8 336 aa17.14■□□□□ 0.33
NEK3-202ENST00000550841 FGF16O43320 207 aa17.13■□□□□ 0.33
NEK3-202ENST00000550841 PGAM2P15259 253 aa17.13■□□□□ 0.33
NEK3-202ENST00000550841 KCTD9Q7L273 389 aa17.13■□□□□ 0.33
NEK3-202ENST00000550841 OR4C13Q8NGP0 309 aa17.13■□□□□ 0.33
NEK3-202ENST00000550841 ZNF486Q96H40 463 aaPredicted RBP17.13■□□□□ 0.33
NEK3-202ENST00000550841 SCGB3A2Q96PL1 93 aa17.13■□□□□ 0.33
NEK3-202ENST00000550841 RSRP1Q9BUV0 290 aa17.13■□□□□ 0.33
NEK3-202ENST00000550841 HRASLSQ9HDD0 168 aa17.13■□□□□ 0.33
NEK3-202ENST00000550841 SLC2A8Q9NY64 477 aa17.13■□□□□ 0.33
NEK3-202ENST00000550841 NCBP2LA6PVI3 153 aaKnown RBP17.12■□□□□ 0.33
NEK3-202ENST00000550841 CENPXA8MT69 81 aa17.12■□□□□ 0.33
NEK3-202ENST00000550841 CHST1O43916 411 aa17.12■□□□□ 0.33
NEK3-202ENST00000550841 NDUFA7O95182 113 aa17.12■□□□□ 0.33
NEK3-202ENST00000550841 HKR1P10072 659 aa17.12■□□□□ 0.33
NEK3-202ENST00000550841 KIR2DS2P43631 304 aa17.12■□□□□ 0.33
NEK3-202ENST00000550841 RPS16P62249 146 aaKnown RBP17.12■□□□□ 0.33
NEK3-202ENST00000550841 EIF4EBP1Q13541 118 aaPredicted RBP17.12■□□□□ 0.33
NEK3-202ENST00000550841 FAAP20Q6NZ36 180 aa17.12■□□□□ 0.33
NEK3-202ENST00000550841 OR51S1Q8NGJ8 323 aa17.12■□□□□ 0.33
NEK3-202ENST00000550841 TCTEX1D2Q8WW35 142 aa17.12■□□□□ 0.33
NEK3-202ENST00000550841 DDB2Q92466 427 aa17.12■□□□□ 0.33
NEK3-202ENST00000550841 PRSS22Q9GZN4 317 aa17.12■□□□□ 0.33
NEK3-202ENST00000550841 CUBNO60494 3623 aa17.11■□□□□ 0.33
NEK3-202ENST00000550841 NAP1L6A6NFF2 107 aa17.11■□□□□ 0.33
NEK3-202ENST00000550841 LINC00473A8K010 186 aa17.11■□□□□ 0.33
NEK3-202ENST00000550841 IL7P13232 177 aa17.11■□□□□ 0.33
NEK3-202ENST00000550841 LGALS7P47929 136 aa17.11■□□□□ 0.33
NEK3-202ENST00000550841 LINC00205P59089 165 aa17.11■□□□□ 0.33
NEK3-202ENST00000550841 SURF2Q15527 256 aaPredicted RBP17.11■□□□□ 0.33
NEK3-202ENST00000550841 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.11■□□□□ 0.33
NEK3-202ENST00000550841 POC5Q8NA72 575 aa17.11■□□□□ 0.33
NEK3-202ENST00000550841 OR4F5Q8NH21 305 aa17.11■□□□□ 0.33
NEK3-202ENST00000550841 TSNAXQ99598 290 aaKnown RBP17.11■□□□□ 0.33
NEK3-202ENST00000550841 C7orf50Q9BRJ6 194 aaKnown RBP17.11■□□□□ 0.33
NEK3-202ENST00000550841 C19orf24Q9BVV8 132 aa17.11■□□□□ 0.33
NEK3-202ENST00000550841 KIAA1456Q9P272 454 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms