RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 RCN1Q15293 331 aa16.59■□□□□ 0.25
SMARCC2-210ENST00000550519 P2RY14Q15391 338 aa16.59■□□□□ 0.25
SMARCC2-210ENST00000550519 OGFRL1Q5TC84 451 aaPredicted RBP16.59■□□□□ 0.25
SMARCC2-210ENST00000550519 OR5T1Q8NG75 326 aa16.59■□□□□ 0.25
SMARCC2-210ENST00000550519 GAR1Q9NY12 217 aaKnown RBP16.59■□□□□ 0.25
SMARCC2-210ENST00000550519 A0A0G2JLM5 398 aa16.58■□□□□ 0.24
SMARCC2-210ENST00000550519 C13orf42A0A1B0GVH6 325 aa16.58■□□□□ 0.24
SMARCC2-210ENST00000550519 SLC17A2O00624 439 aa16.58■□□□□ 0.24
SMARCC2-210ENST00000550519 IGLV2-23P01705 113 aa16.58■□□□□ 0.24
SMARCC2-210ENST00000550519 MOGAT2Q3SYC2 334 aa16.58■□□□□ 0.24
SMARCC2-210ENST00000550519 SGPP2Q8IWX5 399 aa16.58■□□□□ 0.24
SMARCC2-210ENST00000550519 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.58■□□□□ 0.24
SMARCC2-210ENST00000550519 ARHGAP5-AS1Q96IT6 56 aa16.58■□□□□ 0.24
SMARCC2-210ENST00000550519 RDH8Q9NYR8 311 aa16.58■□□□□ 0.24
SMARCC2-210ENST00000550519 PTGES3LE9PB15 166 aa16.57■□□□□ 0.24
SMARCC2-210ENST00000550519 BRI3O95415 125 aa16.57■□□□□ 0.24
SMARCC2-210ENST00000550519 CRYGBP07316 175 aa16.57■□□□□ 0.24
SMARCC2-210ENST00000550519 PJVKQ0ZLH3 352 aa16.57■□□□□ 0.24
SMARCC2-210ENST00000550519 ZFAND6Q6FIF0 208 aa16.57■□□□□ 0.24
SMARCC2-210ENST00000550519 IL34Q6ZMJ4 242 aa16.57■□□□□ 0.24
SMARCC2-210ENST00000550519 TMEM91Q6ZNR0 172 aa16.57■□□□□ 0.24
SMARCC2-210ENST00000550519 TMEM68Q96MH6 324 aa16.57■□□□□ 0.24
SMARCC2-210ENST00000550519 CMSS1Q9BQ75 279 aaKnown RBP16.57■□□□□ 0.24
SMARCC2-210ENST00000550519 PECRQ9BY49 303 aa16.57■□□□□ 0.24
SMARCC2-210ENST00000550519 PLGRKTQ9HBL7 147 aa16.57■□□□□ 0.24
SMARCC2-210ENST00000550519 SLC35D1Q9NTN3 355 aa16.57■□□□□ 0.24
SMARCC2-210ENST00000550519 TRDCB7Z8K6 153 aa16.56■□□□□ 0.24
SMARCC2-210ENST00000550519 M0R1X1 148 aa16.56■□□□□ 0.24
SMARCC2-210ENST00000550519 CASQ2O14958 399 aaPredicted RBP16.56■□□□□ 0.24
SMARCC2-210ENST00000550519 CNIH1O95406 144 aa16.56■□□□□ 0.24
SMARCC2-210ENST00000550519 LGALS7P47929 136 aa16.56■□□□□ 0.24
SMARCC2-210ENST00000550519 VEGFCP49767 419 aa16.56■□□□□ 0.24
SMARCC2-210ENST00000550519 MED22Q15528 200 aa16.56■□□□□ 0.24
SMARCC2-210ENST00000550519 LIPKQ5VXJ0 399 aa16.56■□□□□ 0.24
SMARCC2-210ENST00000550519 OR9G4Q8NGQ1 327 aa16.56■□□□□ 0.24
SMARCC2-210ENST00000550519 TMEM203Q969S6 136 aa16.56■□□□□ 0.24
SMARCC2-210ENST00000550519 ISOC1Q96CN7 298 aa16.56■□□□□ 0.24
SMARCC2-210ENST00000550519 CSMD3Q7Z407 3707 aa16.55■□□□□ 0.24
SMARCC2-210ENST00000550519 ANKRD34BA5PLL1 514 aa16.55■□□□□ 0.24
SMARCC2-210ENST00000550519 SERPINB10P48595 397 aa16.55■□□□□ 0.24
SMARCC2-210ENST00000550519 IRF3Q14653 427 aa16.55■□□□□ 0.24
SMARCC2-210ENST00000550519 PLAC9Q5JTB6 97 aa16.55■□□□□ 0.24
SMARCC2-210ENST00000550519 UFD1Q92890 307 aa16.55■□□□□ 0.24
SMARCC2-210ENST00000550519 TINAGL1Q9GZM7 467 aaPredicted RBP16.55■□□□□ 0.24
SMARCC2-210ENST00000550519 AK6Q9Y3D8 172 aaKnown RBP16.55■□□□□ 0.24
SMARCC2-210ENST00000550519 H0Y980 276 aa16.54■□□□□ 0.24
SMARCC2-210ENST00000550519 RAB11BQ15907 218 aa16.54■□□□□ 0.24
SMARCC2-210ENST00000550519 ZNF343Q6P1L6 599 aa16.54■□□□□ 0.24
SMARCC2-210ENST00000550519 OR56B1Q8NGI3 324 aa16.54■□□□□ 0.24
SMARCC2-210ENST00000550519 OR4A4PQ8NGN8 299 aa16.54■□□□□ 0.24
SMARCC2-210ENST00000550519 THAP7Q9BT49 309 aaPredicted RBP16.54■□□□□ 0.24
SMARCC2-210ENST00000550519 AADACP22760 399 aa16.53■□□□□ 0.24
SMARCC2-210ENST00000550519 CLDN12P56749 244 aa16.53■□□□□ 0.24
SMARCC2-210ENST00000550519 SYNJ2BPP57105 145 aa16.53■□□□□ 0.24
SMARCC2-210ENST00000550519 TPBGQ13641 420 aa16.53■□□□□ 0.24
SMARCC2-210ENST00000550519 FAM3DQ96BQ1 224 aa16.53■□□□□ 0.24
SMARCC2-210ENST00000550519 SPATA25Q9BR10 227 aa16.53■□□□□ 0.24
SMARCC2-210ENST00000550519 SDHAF2Q9NX18 166 aa16.53■□□□□ 0.24
SMARCC2-210ENST00000550519 SIGLEC8Q9NYZ4 499 aa16.53■□□□□ 0.24
SMARCC2-210ENST00000550519 PEF1Q9UBV8 284 aaKnown RBP16.53■□□□□ 0.24
SMARCC2-210ENST00000550519 KCNK7Q9Y2U2 307 aa16.53■□□□□ 0.24
SMARCC2-210ENST00000550519 LYSTQ99698 3801 aa16.53■□□□□ 0.24
SMARCC2-210ENST00000550519 DNAH1Q9P2D7 4330 aa16.53■□□□□ 0.24
SMARCC2-210ENST00000550519 STARD9Q9P2P6 4700 aa16.53■□□□□ 0.24
SMARCC2-210ENST00000550519 SRRM4A7MD48 611 aaKnown RBP16.52■□□□□ 0.24
SMARCC2-210ENST00000550519 FABP7O15540 132 aa16.52■□□□□ 0.24
SMARCC2-210ENST00000550519 ARL6IP5O75915 188 aa16.52■□□□□ 0.24
SMARCC2-210ENST00000550519 CD3GP09693 182 aa16.52■□□□□ 0.24
SMARCC2-210ENST00000550519 RPS25P62851 125 aaKnown RBP16.52■□□□□ 0.24
SMARCC2-210ENST00000550519 DYRK1AQ13627 763 aa16.52■□□□□ 0.24
SMARCC2-210ENST00000550519 HAGHQ16775 308 aa16.52■□□□□ 0.24
SMARCC2-210ENST00000550519 MRGPRG-AS1Q2M3A8 158 aa16.52■□□□□ 0.24
SMARCC2-210ENST00000550519 C2orf76Q3KRA6 126 aa16.52■□□□□ 0.24
SMARCC2-210ENST00000550519 TMEM177Q53S58 311 aa16.52■□□□□ 0.24
SMARCC2-210ENST00000550519 C5orf30Q96GV9 206 aa16.52■□□□□ 0.24
SMARCC2-210ENST00000550519 USMG5Q96IX5 58 aa16.52■□□□□ 0.24
SMARCC2-210ENST00000550519 HARBI1Q96MB7 349 aa16.52■□□□□ 0.24
SMARCC2-210ENST00000550519 CABLES2Q9BTV7 478 aa16.52■□□□□ 0.24
SMARCC2-210ENST00000550519 OR2D2Q9H210 308 aa16.52■□□□□ 0.24
SMARCC2-210ENST00000550519 SCN3BQ9NY72 215 aa16.52■□□□□ 0.24
SMARCC2-210ENST00000550519 TRBV12-3P01733 135 aa16.51■□□□□ 0.23
SMARCC2-210ENST00000550519 CSN3P07498 182 aa16.51■□□□□ 0.23
SMARCC2-210ENST00000550519 DEFA5Q01523 94 aa16.51■□□□□ 0.23
SMARCC2-210ENST00000550519 TAGLNQ01995 201 aaKnown RBP16.51■□□□□ 0.23
SMARCC2-210ENST00000550519 TRAM1Q15629 374 aa16.51■□□□□ 0.23
SMARCC2-210ENST00000550519 IGSF11Q5DX21 431 aa16.51■□□□□ 0.23
SMARCC2-210ENST00000550519 ADAM30Q9UKF2 790 aa16.51■□□□□ 0.23
SMARCC2-210ENST00000550519 TNCP24821 2201 aa16.51■□□□□ 0.23
SMARCC2-210ENST00000550519 EPPK1P58107 5090 aaKnown RBP16.51■□□□□ 0.23
SMARCC2-210ENST00000550519 TRBV6-7A0A0A0MS04 114 aa16.5■□□□□ 0.23
SMARCC2-210ENST00000550519 BET1O15155 118 aa16.5■□□□□ 0.23
SMARCC2-210ENST00000550519 DENRO43583 198 aaKnown RBP16.5■□□□□ 0.23
SMARCC2-210ENST00000550519 RBMXL2O75526 392 aaKnown RBP16.5■□□□□ 0.23
SMARCC2-210ENST00000550519 DIRAS3O95661 229 aa16.5■□□□□ 0.23
SMARCC2-210ENST00000550519 PLA2G7Q13093 441 aa16.5■□□□□ 0.23
SMARCC2-210ENST00000550519 BVESQ8NE79 360 aa16.5■□□□□ 0.23
SMARCC2-210ENST00000550519 COA4Q9NYJ1 87 aa16.5■□□□□ 0.23
SMARCC2-210ENST00000550519 SHOXO15266 292 aa16.49■□□□□ 0.23
SMARCC2-210ENST00000550519 FCGR3AP08637 254 aa16.49■□□□□ 0.23
SMARCC2-210ENST00000550519 GSTT2P0CG29 244 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms