RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 RSRP1Q9BUV0 290 aa10.42□□□□□ -0.74
RAB5C-206ENST00000550406 PLSCR3Q9NRY6 295 aa10.42□□□□□ -0.74
RAB5C-206ENST00000550406 FAM181BA6NEQ2 426 aa10.41□□□□□ -0.74
RAB5C-206ENST00000550406 DISC1C4P0D8 188 aa10.41□□□□□ -0.74
RAB5C-206ENST00000550406 PLA2G10O15496 165 aa10.41□□□□□ -0.74
RAB5C-206ENST00000550406 AMY1AP04745 511 aa10.41□□□□□ -0.74
RAB5C-206ENST00000550406 FAM106CPP0CH98 169 aa10.41□□□□□ -0.74
RAB5C-206ENST00000550406 CNTFRP26992 372 aa10.41□□□□□ -0.74
RAB5C-206ENST00000550406 ARHGDIBP52566 201 aa10.41□□□□□ -0.74
RAB5C-206ENST00000550406 F2RL1P55085 397 aa10.41□□□□□ -0.74
RAB5C-206ENST00000550406 ZNF846Q147U1 533 aa10.41□□□□□ -0.74
RAB5C-206ENST00000550406 ZNF57Q68EA5 555 aaPredicted RBP10.41□□□□□ -0.74
RAB5C-206ENST00000550406 BVESQ8NE79 360 aa10.41□□□□□ -0.74
RAB5C-206ENST00000550406 RBM14Q96PK6 669 aaKnown RBP10.41□□□□□ -0.74
RAB5C-206ENST00000550406 JMJD1CQ15652 2540 aa10.41□□□□□ -0.74
RAB5C-206ENST00000550406 LINC00854A0A1B0GVQ3 168 aa10.4□□□□□ -0.74
RAB5C-206ENST00000550406 BTBD17A6NE02 478 aa10.4□□□□□ -0.74
RAB5C-206ENST00000550406 TRIM77I1YAP6 450 aa10.4□□□□□ -0.74
RAB5C-206ENST00000550406 TNFSF12O43508 249 aa10.4□□□□□ -0.74
RAB5C-206ENST00000550406 IGKV1-16P04430 117 aa10.4□□□□□ -0.74
RAB5C-206ENST00000550406 TMEM11P17152 192 aa10.4□□□□□ -0.74
RAB5C-206ENST00000550406 CD40LGP29965 261 aa10.4□□□□□ -0.74
RAB5C-206ENST00000550406 THBS3P49746 956 aa10.4□□□□□ -0.74
RAB5C-206ENST00000550406 RELBQ01201 579 aa10.4□□□□□ -0.74
RAB5C-206ENST00000550406 IFITM3Q01628 133 aa10.4□□□□□ -0.74
RAB5C-206ENST00000550406 HES1Q14469 280 aa10.4□□□□□ -0.74
RAB5C-206ENST00000550406 KRTAP24-1Q3LI83 254 aa10.4□□□□□ -0.74
RAB5C-206ENST00000550406 SCGB2B2Q4G0G5 96 aa10.4□□□□□ -0.74
RAB5C-206ENST00000550406 TRIQKQ629K1 86 aa10.4□□□□□ -0.74
RAB5C-206ENST00000550406 Q6ZS46 218 aa10.4□□□□□ -0.74
RAB5C-206ENST00000550406 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.4□□□□□ -0.74
RAB5C-206ENST00000550406 ZBTB34Q8NCN2 500 aa10.4□□□□□ -0.74
RAB5C-206ENST00000550406 OR2T10Q8NGZ9 312 aa10.4□□□□□ -0.74
RAB5C-206ENST00000550406 MARCH1Q8TCQ1 289 aa10.4□□□□□ -0.74
RAB5C-206ENST00000550406 AKR1E2Q96JD6 320 aa10.4□□□□□ -0.74
RAB5C-206ENST00000550406 SLC25A33Q9BSK2 321 aa10.4□□□□□ -0.74
RAB5C-206ENST00000550406 CCDC32Q9BV29 185 aa10.4□□□□□ -0.74
RAB5C-206ENST00000550406 SLC2A8Q9NY64 477 aa10.4□□□□□ -0.74
RAB5C-206ENST00000550406 GPR31O00270 319 aa10.39□□□□□ -0.75
RAB5C-206ENST00000550406 PGLYRP1O75594 196 aaPredicted RBP10.39□□□□□ -0.75
RAB5C-206ENST00000550406 OR2F2O95006 317 aa10.39□□□□□ -0.75
RAB5C-206ENST00000550406 MOSP00540 346 aa10.39□□□□□ -0.75
RAB5C-206ENST00000550406 PI3P19957 117 aa10.39□□□□□ -0.75
RAB5C-206ENST00000550406 MC5RP33032 325 aa10.39□□□□□ -0.75
RAB5C-206ENST00000550406 BTCP35070 178 aa10.39□□□□□ -0.75
RAB5C-206ENST00000550406 AP3S2P59780 193 aa10.39□□□□□ -0.75
RAB5C-206ENST00000550406 BLCAPP62952 87 aa10.39□□□□□ -0.75
RAB5C-206ENST00000550406 PHLDA2Q53GA4 152 aa10.39□□□□□ -0.75
RAB5C-206ENST00000550406 ZNF66Q6ZN08 573 aa10.39□□□□□ -0.75
RAB5C-206ENST00000550406 IDO2Q6ZQW0 420 aa10.39□□□□□ -0.75
RAB5C-206ENST00000550406 ZFAND2BQ8WV99 257 aa10.39□□□□□ -0.75
RAB5C-206ENST00000550406 ADTRPQ96IZ2 230 aa10.39□□□□□ -0.75
RAB5C-206ENST00000550406 RTBDNQ9BSG5 229 aaPredicted RBP10.39□□□□□ -0.75
RAB5C-206ENST00000550406 WDR12Q9GZL7 423 aaKnown RBP10.39□□□□□ -0.75
RAB5C-206ENST00000550406 SLC35D1Q9NTN3 355 aa10.39□□□□□ -0.75
RAB5C-206ENST00000550406 MCUBQ9NWR8 336 aa10.39□□□□□ -0.75
RAB5C-206ENST00000550406 C1RLQ9NZP8 487 aa10.39□□□□□ -0.75
RAB5C-206ENST00000550406 PITPNC1Q9UKF7 332 aa10.39□□□□□ -0.75
RAB5C-206ENST00000550406 GPR132Q9UNW8 380 aa10.39□□□□□ -0.75
RAB5C-206ENST00000550406 WASHC3Q9Y3C0 194 aa10.39□□□□□ -0.75
RAB5C-206ENST00000550406 PLXNB1O43157 2135 aa10.39□□□□□ -0.75
RAB5C-206ENST00000550406 C2CD3Q4AC94 2353 aa10.38□□□□□ -0.75
RAB5C-206ENST00000550406 SRRM4A7MD48 611 aaKnown RBP10.38□□□□□ -0.75
RAB5C-206ENST00000550406 LPCAT3Q6P1A2 487 aa10.38□□□□□ -0.75
RAB5C-206ENST00000550406 LIAT1Q6ZQX7 453 aa10.38□□□□□ -0.75
RAB5C-206ENST00000550406 Q6ZSV7 163 aa10.38□□□□□ -0.75
RAB5C-206ENST00000550406 SLC38A6Q8IZM9 456 aa10.38□□□□□ -0.75
RAB5C-206ENST00000550406 Q8N9W7 124 aa10.38□□□□□ -0.75
RAB5C-206ENST00000550406 DEDD2Q8WXF8 326 aa10.38□□□□□ -0.75
RAB5C-206ENST00000550406 HSD17B10Q99714 261 aaKnown RBP10.38□□□□□ -0.75
RAB5C-206ENST00000550406 PRRT1Q99946 306 aa10.38□□□□□ -0.75
RAB5C-206ENST00000550406 VSIG4Q9Y279 399 aa10.38□□□□□ -0.75
RAB5C-206ENST00000550406 SH2D7A6NKC9 451 aaPredicted RBP10.37□□□□□ -0.75
RAB5C-206ENST00000550406 H7C2Y5 167 aa10.37□□□□□ -0.75
RAB5C-206ENST00000550406 FCGR3BO75015 233 aa10.37□□□□□ -0.75
RAB5C-206ENST00000550406 IGLV2-23P01705 113 aa10.37□□□□□ -0.75
RAB5C-206ENST00000550406 APOA2P02652 100 aa10.37□□□□□ -0.75
RAB5C-206ENST00000550406 VSIG10L2P0DP72 767 aa10.37□□□□□ -0.75
RAB5C-206ENST00000550406 PGAM2P15259 253 aa10.37□□□□□ -0.75
RAB5C-206ENST00000550406 CCR6P51684 374 aa10.37□□□□□ -0.75
RAB5C-206ENST00000550406 RND3P61587 244 aa10.37□□□□□ -0.75
RAB5C-206ENST00000550406 TAGLNQ01995 201 aaKnown RBP10.37□□□□□ -0.75
RAB5C-206ENST00000550406 TMEM177Q53S58 311 aa10.37□□□□□ -0.75
RAB5C-206ENST00000550406 OR2B11Q5JQS5 317 aa10.37□□□□□ -0.75
RAB5C-206ENST00000550406 C11orf88Q6PI97 169 aa10.37□□□□□ -0.75
RAB5C-206ENST00000550406 KCTD9Q7L273 389 aa10.37□□□□□ -0.75
RAB5C-206ENST00000550406 C16orf82Q7Z2V1 217 aa10.37□□□□□ -0.75
RAB5C-206ENST00000550406 PDPNQ86YL7 162 aa10.37□□□□□ -0.75
RAB5C-206ENST00000550406 C5orf56Q8N8D9 126 aa10.37□□□□□ -0.75
RAB5C-206ENST00000550406 NPBQ8NG41 125 aa10.37□□□□□ -0.75
RAB5C-206ENST00000550406 TCTEX1D2Q8WW35 142 aa10.37□□□□□ -0.75
RAB5C-206ENST00000550406 C5orf66Q9H5L9 145 aa10.37□□□□□ -0.75
RAB5C-206ENST00000550406 SCP2D1Q9UJQ7 156 aa10.37□□□□□ -0.75
RAB5C-206ENST00000550406 TBC1D24Q9ULP9 559 aa10.37□□□□□ -0.75
RAB5C-206ENST00000550406 MOB4Q9Y3A3 225 aa10.37□□□□□ -0.75
RAB5C-206ENST00000550406 RAMP3O60896 148 aa10.36□□□□□ -0.75
RAB5C-206ENST00000550406 PEX14O75381 377 aa10.36□□□□□ -0.75
RAB5C-206ENST00000550406 UPK1BO75841 260 aa10.36□□□□□ -0.75
RAB5C-206ENST00000550406 NDUFA3O95167 84 aa10.36□□□□□ -0.75
RAB5C-206ENST00000550406 RLN1P04808 185 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms