RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 IGKV1D-39P04432 117 aa6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 CD99P14209 185 aa6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 USF1P22415 310 aaPredicted RBP6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 COX7A1P24310 79 aa6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 F2RP25116 425 aa6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 UCP1P25874 307 aa6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 DUTP33316 252 aaKnown RBP6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 ZNF137PP52743 207 aa6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 BRWD1-AS2P59051 145 aa6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 CD83Q01151 205 aa6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 DIAPH2-AS1Q14236 149 aa6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 HLA-DRB5Q30154 266 aa6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 KRTAP21-3Q3LHN1 58 aa6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 ZNF585BQ52M93 769 aa6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 DCAF12L2Q5VW00 463 aa6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 KCTD9Q7L273 389 aa6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 CMTM1Q8IZ96 169 aa6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 LYG1Q8N1E2 194 aa6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 ABHD12Q8N2K0 398 aa6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 OR9G1Q8NH87 305 aa6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 ST6GALNAC6Q969X2 333 aa6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 C1orf159Q96HA4 380 aa6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 TBX15Q96SF7 602 aa6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 PHB2Q99623 299 aa6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 TMEM222Q9H0R3 208 aa6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 RANGRFQ9HD47 186 aaPredicted RBP6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 PIPOXQ9P0Z9 390 aa6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 SHPKQ9UHJ6 478 aa6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 KPTNQ9Y664 436 aa6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 CSMD2Q7Z408 3487 aa6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 TET2Q6N021 2002 aaPredicted RBP6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 MPTX1A8MV57 137 aa6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 ODF3BA8MYP8 253 aa6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 RNASEK-C17orf49H0YIS7 233 aa6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 M0R1X1 148 aa6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 RAB29O14966 203 aa6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 PFDN1O60925 122 aa6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 CCNKO75909 580 aa6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 IGLV1-47P01700 117 aa6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 HLA-GP17693 338 aa6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 PRTN3P24158 256 aa6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 DVL1P1P54792 670 aaPredicted RBP6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 H2BFSP57053 126 aa6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 OR2B11Q5JQS5 317 aa6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 LDLRAD2Q5SZI1 272 aa6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 NCR3LG1Q68D85 454 aa6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 PRSS57Q6UWY2 283 aa6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 ZNF66Q6ZN08 573 aa6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 C1orf122Q6ZSJ8 110 aa6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 ZNF833PQ6ZTB9 187 aa6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 VMO1Q7Z5L0 202 aa6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 AKAP14Q86UN6 197 aa6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 SELENOHQ8IZQ5 122 aaKnown RBP6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 PNKDQ8N490 385 aa6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 LRTM2Q8N967 370 aa6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 DRAXINQ8NBI3 349 aaPredicted RBP6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 UXS1Q8NBZ7 420 aa6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 MAPK1IP1LQ8NDC0 245 aa6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 OR4P4Q8NGL7 312 aa6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 OR5M8Q8NGP6 311 aa6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 COQ8AQ8NI60 647 aa6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 TCTEX1D2Q8WW35 142 aa6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 DDB2Q92466 427 aa6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 RBMXL1Q96E39 390 aaKnown RBP6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 C18orf12Q96KH6 178 aa6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 Q96MF0 132 aa6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 FYTTD1Q96QD9 318 aaKnown RBP6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 HSD17B10Q99714 261 aaKnown RBP6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 FOXC2Q99958 501 aa6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 CLEC7AQ9BXN2 247 aa6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 MRPL20Q9BYC9 149 aaKnown RBP6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 METTL8Q9H825 291 aaKnown RBP6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 UNKLQ9H9P5 680 aaKnown RBP6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 KCNIP3Q9Y2W7 256 aa6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 INSIG2Q9Y5U4 225 aa6.57□□□□□ -1.36
DEPDC4-207ENST00000549249 A0A0G2JRQ6 117 aa6.56□□□□□ -1.36
DEPDC4-207ENST00000549249 hCG_1809904A0A1W2PP81 198 aa6.56□□□□□ -1.36
DEPDC4-207ENST00000549249 A0A1W2PPE2 198 aa6.56□□□□□ -1.36
DEPDC4-207ENST00000549249 A0A1W2PR64 198 aa6.56□□□□□ -1.36
DEPDC4-207ENST00000549249 A0A1W2PRV1 198 aa6.56□□□□□ -1.36
DEPDC4-207ENST00000549249 G3V3Q6 166 aa6.56□□□□□ -1.36
DEPDC4-207ENST00000549249 BOLA2-SMG1P6H3BVE0 249 aa6.56□□□□□ -1.36
DEPDC4-207ENST00000549249 RAMP3O60896 148 aa6.56□□□□□ -1.36
DEPDC4-207ENST00000549249 CDS2O95674 445 aa6.56□□□□□ -1.36
DEPDC4-207ENST00000549249 MSMBP08118 114 aa6.56□□□□□ -1.36
DEPDC4-207ENST00000549249 ANXA3P12429 323 aa6.56□□□□□ -1.36
DEPDC4-207ENST00000549249 ZNF16P17020 682 aaPredicted RBP6.56□□□□□ -1.36
DEPDC4-207ENST00000549249 S100GP29377 79 aa6.56□□□□□ -1.36
DEPDC4-207ENST00000549249 PAX8Q06710 450 aa6.56□□□□□ -1.36
DEPDC4-207ENST00000549249 LOXL1Q08397 574 aaPredicted RBP6.56□□□□□ -1.36
DEPDC4-207ENST00000549249 GGNBP1Q5YKI7 109 aa6.56□□□□□ -1.36
DEPDC4-207ENST00000549249 LYZL2Q7Z4W2 148 aa6.56□□□□□ -1.36
DEPDC4-207ENST00000549249 LGI3Q8N145 548 aa6.56□□□□□ -1.36
DEPDC4-207ENST00000549249 SLC35G3Q8N808 338 aa6.56□□□□□ -1.36
DEPDC4-207ENST00000549249 ZNF383Q8NA42 475 aa6.56□□□□□ -1.36
DEPDC4-207ENST00000549249 BEND2Q8NDZ0 799 aa6.56□□□□□ -1.36
DEPDC4-207ENST00000549249 OR11H6Q8NGC7 330 aa6.56□□□□□ -1.36
DEPDC4-207ENST00000549249 TMEM56Q96MV1 263 aa6.56□□□□□ -1.36
DEPDC4-207ENST00000549249 REG4Q9BYZ8 158 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms