RNA–Protein interactions for RNA: ENST00000549076.1

ARFGAP1-222, Transcript of ADP ribosylation factor GTPase activating protein 1, human

TSL 2

Gene ARFGAP1, Length 913 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARFGAP1-222	ENST00000549076	STUB1	Q9UNE7	303 aa		13.17	□□□□□ -0.3
ARFGAP1-222	ENST00000549076	SSR3	Q9UNL2	185 aa		13.17	□□□□□ -0.3
ARFGAP1-222	ENST00000549076	GAB2	Q9UQC2	676 aa		13.17	□□□□□ -0.3
ARFGAP1-222	ENST00000549076	TRBV6-7	A0A0A0MS04	114 aa		13.16	□□□□□ -0.3
ARFGAP1-222	ENST00000549076	NOTO	A8MTQ0	251 aa		13.16	□□□□□ -0.3
ARFGAP1-222	ENST00000549076	FCN1	O00602	326 aa		13.16	□□□□□ -0.3
ARFGAP1-222	ENST00000549076	SCGN	O76038	276 aa		13.16	□□□□□ -0.3
ARFGAP1-222	ENST00000549076	GSTT2	P0CG29	244 aa		13.16	□□□□□ -0.3
ARFGAP1-222	ENST00000549076	GSTT2B	P0CG30	244 aa		13.16	□□□□□ -0.3
ARFGAP1-222	ENST00000549076	LUM	P51884	338 aa	Predicted RBP	13.16	□□□□□ -0.3
ARFGAP1-222	ENST00000549076	CRIP2	P52943	208 aa	Predicted RBP	13.16	□□□□□ -0.3
ARFGAP1-222	ENST00000549076	NDP	Q00604	133 aa		13.16	□□□□□ -0.3
ARFGAP1-222	ENST00000549076	CD69	Q07108	199 aa		13.16	□□□□□ -0.3
ARFGAP1-222	ENST00000549076	KIAA0141	Q14154	515 aa	Predicted RBP	13.16	□□□□□ -0.3
ARFGAP1-222	ENST00000549076	SRSF7	Q16629	238 aa	Known RBP eCLIP	13.16	□□□□□ -0.3
ARFGAP1-222	ENST00000549076	AKIRIN2	Q53H80	203 aa		13.16	□□□□□ -0.3
ARFGAP1-222	ENST00000549076	ACTBL2	Q562R1	376 aa		13.16	□□□□□ -0.3
ARFGAP1-222	ENST00000549076	IGSF11	Q5DX21	431 aa		13.16	□□□□□ -0.3
ARFGAP1-222	ENST00000549076	UNQ5815/PRO19632	Q6UWF5	114 aa		13.16	□□□□□ -0.3
ARFGAP1-222	ENST00000549076	TPRA1	Q86W33	373 aa		13.16	□□□□□ -0.3
ARFGAP1-222	ENST00000549076	OR5B12	Q96R08	314 aa		13.16	□□□□□ -0.3
ARFGAP1-222	ENST00000549076	CABLES2	Q9BTV7	478 aa		13.16	□□□□□ -0.3
ARFGAP1-222	ENST00000549076	OR2D2	Q9H210	308 aa		13.16	□□□□□ -0.3
ARFGAP1-222	ENST00000549076	SLC35D1	Q9NTN3	355 aa		13.16	□□□□□ -0.3
ARFGAP1-222	ENST00000549076	TXNL4B	Q9NX01	149 aa	Known RBP	13.16	□□□□□ -0.3
ARFGAP1-222	ENST00000549076	NUBP2	Q9Y5Y2	271 aa		13.16	□□□□□ -0.3
ARFGAP1-222	ENST00000549076		A0A0B4J203	849 aa		13.15	□□□□□ -0.3
ARFGAP1-222	ENST00000549076		I3L521	148 aa		13.15	□□□□□ -0.3
ARFGAP1-222	ENST00000549076	PROP1	O75360	226 aa		13.15	□□□□□ -0.3
ARFGAP1-222	ENST00000549076	IGKV1-16	P04430	117 aa		13.15	□□□□□ -0.3
ARFGAP1-222	ENST00000549076	LGALS7	P47929	136 aa		13.15	□□□□□ -0.3
ARFGAP1-222	ENST00000549076	INSL3	P51460	131 aa		13.15	□□□□□ -0.3
ARFGAP1-222	ENST00000549076	RTL8B	Q17RB0	113 aa		13.15	□□□□□ -0.3
ARFGAP1-222	ENST00000549076	ZNF230	Q9UIE0	474 aa	Predicted RBP	13.15	□□□□□ -0.3
ARFGAP1-222	ENST00000549076	SLC25A17	O43808	307 aa		13.14	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	CNIH1	O95406	144 aa		13.14	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	CA2	P00918	260 aa		13.14	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	RRAS	P10301	218 aa		13.14	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	DTYMK	P23919	212 aa		13.14	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	ZNF260	Q3ZCT1	412 aa		13.14	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	CDNF	Q49AH0	187 aa		13.14	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	C19orf54	Q5BKX5	351 aa		13.14	□□□□□ -0.31
ARFGAP1-222	ENST00000549076		Q6ZS49	121 aa		13.14	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	MAFIP	Q8WZ33	124 aa		13.14	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	ARPC1A	Q92747	370 aa		13.14	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	ADTRP	Q96IZ2	230 aa		13.14	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	SLA2	Q9H6Q3	261 aa		13.14	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	SDHAF2	Q9NX18	166 aa		13.14	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	FBXO7	Q9Y3I1	522 aa		13.14	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	SMIM30	A4D0T7	59 aa		13.13	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	CTXN2	P0C2S0	81 aa		13.13	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	ECI1	P42126	302 aa		13.13	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	LINC00205	P59089	165 aa		13.13	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	GNB1	P62873	340 aa		13.13	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	PITPNA	Q00169	270 aa		13.13	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	FXYD3	Q14802	87 aa		13.13	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	ZNF773	Q6PK81	442 aa		13.13	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	NR2C2AP	Q86WQ0	139 aa		13.13	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	LFNG	Q8NES3	379 aa		13.13	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	GRPEL2	Q8TAA5	225 aa		13.13	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	FAM103A1	Q9BTL3	118 aa	Known RBP	13.13	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	13.13	□□□□□ -0.31	7e-6	■□□□□ 11
ARFGAP1-222	ENST00000549076	DAPK2	Q9UIK4	370 aa		13.13	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	RRP15	Q9Y3B9	282 aa	Known RBP	13.13	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	LINC01619	G3V211	115 aa		13.12	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	SHOX	O15266	292 aa		13.12	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	SOX15	O60248	233 aa		13.12	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	LGALS1	P09382	135 aa	Known RBP	13.12	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	EGR2	P11161	476 aa	Predicted RBP	13.12	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	VAX1	Q5SQQ9	334 aa		13.12	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	HACD4	Q5VWC8	232 aa		13.12	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	HARBI1	Q96MB7	349 aa		13.12	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	B9D2	Q9BPU9	175 aa		13.12	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	ST6GALNAC5	Q9BVH7	336 aa		13.12	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	DCSTAMP	Q9H295	470 aa		13.12	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	ZNF355P	Q9NSJ1	428 aa		13.12	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	OVOL1	O14753	267 aa		13.11	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	ARPC1B	O15143	372 aa	Known RBP	13.11	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	TPPP2	P59282	170 aa		13.11	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	SFXN4	Q6P4A7	337 aa		13.11	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	ZNF429	Q86V71	674 aa		13.11	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	H1FOO	Q8IZA3	346 aa	Predicted RBP	13.11	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	CASTOR1	Q8WTX7	329 aa		13.11	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	TMEM68	Q96MH6	324 aa		13.11	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	MS4A10	Q96PG2	267 aa		13.11	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	SCOC	Q9UIL1	159 aa		13.11	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	SORL1	Q92673	2214 aa		13.11	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	TRGV3	P03979	118 aa		13.1	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	GNG2	P59768	71 aa		13.1	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	VMA21	Q3ZAQ7	101 aa		13.1	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	TMEM177	Q53S58	311 aa		13.1	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	BVES	Q8NE79	360 aa		13.1	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	DCUN1D4	Q92564	292 aa		13.1	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	ALX4	Q9H161	411 aa	Predicted RBP	13.1	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	ZNF256	Q9Y2P7	627 aa	Predicted RBP	13.1	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	COL7A1	Q02388	2944 aa		13.09	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	LOC100506127	A0A0U1RQW1	187 aa		13.09	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	C13orf42	A0A1B0GVH6	325 aa		13.09	□□□□□ -0.31
ARFGAP1-222	ENST00000549076		H3BUA1	57 aa		13.09	□□□□□ -0.31
ARFGAP1-222	ENST00000549076	SLC22A5	O76082	557 aa		13.09	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms