RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 RPS23P62266 143 aaKnown RBP2.41□□□□□ -2.02
PTCH1-216ENST00000548379 STX3Q13277 289 aa2.41□□□□□ -2.02
PTCH1-216ENST00000548379 COTL1Q14019 142 aa2.41□□□□□ -2.02
PTCH1-216ENST00000548379 KIR2DS1Q14954 304 aa2.41□□□□□ -2.02
PTCH1-216ENST00000548379 TOMM34Q15785 309 aaPredicted RBP2.41□□□□□ -2.02
PTCH1-216ENST00000548379 MOGQ16653 247 aa2.41□□□□□ -2.02
PTCH1-216ENST00000548379 ORMDL2Q53FV1 153 aa2.41□□□□□ -2.02
PTCH1-216ENST00000548379 ZNF678Q5SXM1 525 aa2.41□□□□□ -2.02
PTCH1-216ENST00000548379 RPS27LQ71UM5 84 aaKnown RBP2.41□□□□□ -2.02
PTCH1-216ENST00000548379 GRINAQ7Z429 371 aa2.41□□□□□ -2.02
PTCH1-216ENST00000548379 ZNF695Q8IW36 515 aa2.41□□□□□ -2.02
PTCH1-216ENST00000548379 VKORC1L1Q8N0U8 176 aa2.41□□□□□ -2.02
PTCH1-216ENST00000548379 CCNYL1Q8N7R7 359 aa2.41□□□□□ -2.02
PTCH1-216ENST00000548379 WDR31Q8NA23 367 aa2.41□□□□□ -2.02
PTCH1-216ENST00000548379 CLDND2Q8NHS1 167 aa2.41□□□□□ -2.02
PTCH1-216ENST00000548379 RPEQ96AT9 228 aa2.41□□□□□ -2.02
PTCH1-216ENST00000548379 NDFIP1Q9BT67 221 aa2.41□□□□□ -2.02
PTCH1-216ENST00000548379 SYT4Q9H2B2 425 aa2.41□□□□□ -2.02
PTCH1-216ENST00000548379 ARMC7Q9H6L4 198 aa2.41□□□□□ -2.02
PTCH1-216ENST00000548379 ZNF355PQ9NSJ1 428 aa2.41□□□□□ -2.02
PTCH1-216ENST00000548379 ACER3Q9NUN7 267 aa2.41□□□□□ -2.02
PTCH1-216ENST00000548379 C1orf109Q9NX04 203 aa2.41□□□□□ -2.02
PTCH1-216ENST00000548379 ZNRD1Q9P1U0 126 aa2.41□□□□□ -2.02
PTCH1-216ENST00000548379 TIMM22Q9Y584 194 aa2.41□□□□□ -2.02
PTCH1-216ENST00000548379 V9GYY9 64 aa2.41□□□□□ -2.02
PTCH1-216ENST00000548379 A0A1B0GW15 77 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 LRCOL1A6NCL2 159 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 DNASE2O00115 360 aaPredicted RBP2.4□□□□□ -2.03
PTCH1-216ENST00000548379 MED6O75586 246 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 YIF1AO95070 293 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 VAMP5O95183 116 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 MPZL1O95297 269 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 RAB36O95755 333 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 HPRT1P00492 218 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 CECR9P0C854 216 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 CD79AP11912 226 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 CBR1P16152 277 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 CXCR1P25024 350 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 SSTR5P35346 364 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 IDH2P48735 452 aaKnown RBP2.4□□□□□ -2.03
PTCH1-216ENST00000548379 EVX1P49640 407 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 POLR2HP52434 150 aaKnown RBP2.4□□□□□ -2.03
PTCH1-216ENST00000548379 SYNJ2BPP57105 145 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 ZNF121P58317 390 aaPredicted RBP2.4□□□□□ -2.03
PTCH1-216ENST00000548379 UBA52P62987 128 aaKnown RBP2.4□□□□□ -2.03
PTCH1-216ENST00000548379 RPL38P63173 70 aaKnown RBP2.4□□□□□ -2.03
PTCH1-216ENST00000548379 MRPS25P82663 173 aaKnown RBP2.4□□□□□ -2.03
PTCH1-216ENST00000548379 BAMBIQ13145 260 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 SKP2Q13309 424 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 C1DQ13901 141 aaKnown RBP2.4□□□□□ -2.03
PTCH1-216ENST00000548379 ZNF141Q15928 474 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 ATP6V1FQ16864 119 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 NDUFAF6Q330K2 333 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 LINC00483Q53H64 154 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 TPTE2P1Q5T6R2 138 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 SAXO2Q658L1 398 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 C8orf74Q6P047 294 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 WDR82Q6UXN9 313 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 RIMKLAQ8IXN7 391 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 SELENOHQ8IZQ5 122 aaKnown RBP2.4□□□□□ -2.03
PTCH1-216ENST00000548379 RIBC1Q8N443 379 aaPredicted RBP2.4□□□□□ -2.03
PTCH1-216ENST00000548379 OR6N2Q8NGY6 317 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 LGALS14Q8TCE9 139 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 PIFOQ8TCI5 191 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 SFXN5Q8TD22 340 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 APH1BQ8WW43 257 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 OR5P2Q8WZ92 322 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 ANP32BQ92688 251 aaKnown RBP2.4□□□□□ -2.03
PTCH1-216ENST00000548379 RAB8BQ92930 207 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 L3HYPDHQ96EM0 354 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 PPP3R2Q96LZ3 170 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 DOK1Q99704 481 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 AGMATQ9BSE5 352 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 DPY30Q9C005 99 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 VCX3AQ9NNX9 186 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 NECAP2Q9NVZ3 263 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 MTFP1Q9UDX5 166 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 ENPP5Q9UJA9 477 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 FBXL3Q9UKT7 428 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 FIS1Q9Y3D6 152 aa2.4□□□□□ -2.03
PTCH1-216ENST00000548379 TSSC4Q9Y5U2 329 aaPredicted RBP2.4□□□□□ -2.03
PTCH1-216ENST00000548379 FN1P02751 2386 aaKnown RBP2.4□□□□□ -2.03
PTCH1-216ENST00000548379 OBSCNQ5VST9 7968 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 ZNF469Q96JG9 3925 aaPredicted RBP2.39□□□□□ -2.03
PTCH1-216ENST00000548379 CPAMD8Q8IZJ3 1885 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 STAB1Q9NY15 2570 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 A0A096LPI6 279 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 TMED7-TICAM2A0A0A6YYA0 188 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 IGHV1-69-2A0A0G2JMI3 117 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 EXOC1LA0A1B0GW35 172 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 TMEM223A0PJW6 202 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 TMEM72A0PK05 275 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 ISPDA4D126 451 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 TRPC5OSA6NMA1 111 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 CLDN25C9JDP6 229 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 LYNX1G3V0Z9 82 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 NME4O00746 187 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 BPY2O14599 106 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 MAGEB4O15481 346 aaPredicted RBP2.39□□□□□ -2.03
PTCH1-216ENST00000548379 NDUFS6O75380 124 aaKnown RBP2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms