RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 CNBD2Q96M20 576 aa5.2□□□□□ -1.58
SCAF11-211ENST00000547950 FANCD2OSQ96PS1 177 aa5.2□□□□□ -1.58
SCAF11-211ENST00000547950 RNF5Q99942 180 aa5.2□□□□□ -1.58
SCAF11-211ENST00000547950 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.2□□□□□ -1.58
SCAF11-211ENST00000547950 ZNF355PQ9NSJ1 428 aa5.2□□□□□ -1.58
SCAF11-211ENST00000547950 RDH8Q9NYR8 311 aa5.2□□□□□ -1.58
SCAF11-211ENST00000547950 METTL1Q9UBP6 276 aaKnown RBP5.2□□□□□ -1.58
SCAF11-211ENST00000547950 ZNF580Q9UK33 172 aa5.2□□□□□ -1.58
SCAF11-211ENST00000547950 RAB22AQ9UL26 194 aa5.2□□□□□ -1.58
SCAF11-211ENST00000547950 MGAT4AQ9UM21 535 aa5.2□□□□□ -1.58
SCAF11-211ENST00000547950 GAB2Q9UQC2 676 aa5.2□□□□□ -1.58
SCAF11-211ENST00000547950 FOXA2Q9Y261 457 aaPredicted RBP5.2□□□□□ -1.58
SCAF11-211ENST00000547950 LSM4Q9Y4Z0 139 aaKnown RBP5.2□□□□□ -1.58
SCAF11-211ENST00000547950 NUBP2Q9Y5Y2 271 aa5.2□□□□□ -1.58
SCAF11-211ENST00000547950 TMEM272A0A1B0GTI8 110 aa5.19□□□□□ -1.58
SCAF11-211ENST00000547950 TMEM238LA0A1B0GVL6 79 aa5.19□□□□□ -1.58
SCAF11-211ENST00000547950 M0R1X1 148 aa5.19□□□□□ -1.58
SCAF11-211ENST00000547950 ITGB1BP1O14713 200 aa5.19□□□□□ -1.58
SCAF11-211ENST00000547950 PDCD5O14737 125 aa5.19□□□□□ -1.58
SCAF11-211ENST00000547950 OVOL1O14753 267 aa5.19□□□□□ -1.58
SCAF11-211ENST00000547950 BET1O15155 118 aa5.19□□□□□ -1.58
SCAF11-211ENST00000547950 SLC25A17O43808 307 aa5.19□□□□□ -1.58
SCAF11-211ENST00000547950 SAP30O75446 220 aa5.19□□□□□ -1.58
SCAF11-211ENST00000547950 RBBP9O75884 186 aa5.19□□□□□ -1.58
SCAF11-211ENST00000547950 CNIH1O95406 144 aa5.19□□□□□ -1.58
SCAF11-211ENST00000547950 IGHV3-11P01762 117 aa5.19□□□□□ -1.58
SCAF11-211ENST00000547950 IGKV1-16P04430 117 aa5.19□□□□□ -1.58
SCAF11-211ENST00000547950 TFAP2AP05549 437 aa5.19□□□□□ -1.58
SCAF11-211ENST00000547950 OR8U9P0C7N5 309 aa5.19□□□□□ -1.58
SCAF11-211ENST00000547950 NHLRC4P0CG21 123 aaPredicted RBP5.19□□□□□ -1.58
SCAF11-211ENST00000547950 GSTT2P0CG29 244 aa5.19□□□□□ -1.58
SCAF11-211ENST00000547950 GSTT2BP0CG30 244 aa5.19□□□□□ -1.58
SCAF11-211ENST00000547950 EGR2P11161 476 aaPredicted RBP5.19□□□□□ -1.58
SCAF11-211ENST00000547950 GNB3P16520 340 aa5.19□□□□□ -1.58
SCAF11-211ENST00000547950 CD40LGP29965 261 aa5.19□□□□□ -1.58
SCAF11-211ENST00000547950 TALDO1P37837 337 aa5.19□□□□□ -1.58
SCAF11-211ENST00000547950 RANBP1P43487 201 aa5.19□□□□□ -1.58
SCAF11-211ENST00000547950 SLURP1P55000 103 aa5.19□□□□□ -1.58
SCAF11-211ENST00000547950 OR10A3P58181 314 aa5.19□□□□□ -1.58
SCAF11-211ENST00000547950 TPPP2P59282 170 aa5.19□□□□□ -1.58
SCAF11-211ENST00000547950 RUNX1Q01196 453 aa5.19□□□□□ -1.58
SCAF11-211ENST00000547950 ID3Q02535 119 aa5.19□□□□□ -1.58
SCAF11-211ENST00000547950 FXYD3Q14802 87 aa5.19□□□□□ -1.58
SCAF11-211ENST00000547950 MOGAT2Q3SYC2 334 aa5.19□□□□□ -1.58
SCAF11-211ENST00000547950 IGSF11Q5DX21 431 aa5.19□□□□□ -1.58
SCAF11-211ENST00000547950 IZUMO2Q6UXV1 221 aa5.19□□□□□ -1.58
SCAF11-211ENST00000547950 ZNF562Q6V9R5 426 aa5.19□□□□□ -1.58
SCAF11-211ENST00000547950 OR5T1Q8NG75 326 aa5.19□□□□□ -1.58
SCAF11-211ENST00000547950 GRPEL2Q8TAA5 225 aa5.19□□□□□ -1.58
SCAF11-211ENST00000547950 MAFIPQ8WZ33 124 aa5.19□□□□□ -1.58
SCAF11-211ENST00000547950 DLX4Q92988 240 aaPredicted RBP5.19□□□□□ -1.58
SCAF11-211ENST00000547950 PTX4Q96A99 478 aa5.19□□□□□ -1.58
SCAF11-211ENST00000547950 FLYWCH2Q96CP2 140 aaKnown RBP5.19□□□□□ -1.58
SCAF11-211ENST00000547950 RAB3CQ96E17 227 aa5.19□□□□□ -1.58
SCAF11-211ENST00000547950 TSNAXQ99598 290 aaKnown RBP5.19□□□□□ -1.58
SCAF11-211ENST00000547950 KRTAP4-7Q9BYR0 210 aa5.19□□□□□ -1.58
SCAF11-211ENST00000547950 VCX3BQ9H321 246 aa5.19□□□□□ -1.58
SCAF11-211ENST00000547950 ZNF230Q9UIE0 474 aaPredicted RBP5.19□□□□□ -1.58
SCAF11-211ENST00000547950 ZNF256Q9Y2P7 627 aaPredicted RBP5.19□□□□□ -1.58
SCAF11-211ENST00000547950 IGHV4OR15-8A0A075B7B6 117 aa5.18□□□□□ -1.58
SCAF11-211ENST00000547950 A0A087WW49 117 aa5.18□□□□□ -1.58
SCAF11-211ENST00000547950 A0A0B4J203 849 aa5.18□□□□□ -1.58
SCAF11-211ENST00000547950 SMIM30A4D0T7 59 aa5.18□□□□□ -1.58
SCAF11-211ENST00000547950 ERICH4A6NGS2 130 aa5.18□□□□□ -1.58
SCAF11-211ENST00000547950 IFITM5A6NNB3 132 aa5.18□□□□□ -1.58
SCAF11-211ENST00000547950 LINC01619G3V211 115 aa5.18□□□□□ -1.58
SCAF11-211ENST00000547950 J3QRK9 145 aa5.18□□□□□ -1.58
SCAF11-211ENST00000547950 LDLRAD4O15165 306 aa5.18□□□□□ -1.58
SCAF11-211ENST00000547950 FABP7O15540 132 aa5.18□□□□□ -1.58
SCAF11-211ENST00000547950 CA2P00918 260 aa5.18□□□□□ -1.58
SCAF11-211ENST00000547950 APOA2P02652 100 aa5.18□□□□□ -1.58
SCAF11-211ENST00000547950 TRGV3P03979 118 aa5.18□□□□□ -1.58
SCAF11-211ENST00000547950 HSPB1P04792 205 aaKnown RBP5.18□□□□□ -1.58
SCAF11-211ENST00000547950 GADD45AP24522 165 aa5.18□□□□□ -1.58
SCAF11-211ENST00000547950 MYL9P24844 172 aa5.18□□□□□ -1.58
SCAF11-211ENST00000547950 SERPINB10P48595 397 aa5.18□□□□□ -1.58
SCAF11-211ENST00000547950 INSL3P51460 131 aa5.18□□□□□ -1.58
SCAF11-211ENST00000547950 CRIP2P52943 208 aaPredicted RBP5.18□□□□□ -1.58
SCAF11-211ENST00000547950 PJVKQ0ZLH3 352 aa5.18□□□□□ -1.58
SCAF11-211ENST00000547950 ARFRP1Q13795 201 aa5.18□□□□□ -1.58
SCAF11-211ENST00000547950 SSX1Q16384 188 aa5.18□□□□□ -1.58
SCAF11-211ENST00000547950 AKIRIN2Q53H80 203 aa5.18□□□□□ -1.58
SCAF11-211ENST00000547950 C19orf54Q5BKX5 351 aa5.18□□□□□ -1.58
SCAF11-211ENST00000547950 LCE1DQ5T752 114 aa5.18□□□□□ -1.58
SCAF11-211ENST00000547950 CD200R1LQ6Q8B3 271 aa5.18□□□□□ -1.58
SCAF11-211ENST00000547950 ZNF367Q7RTV3 350 aa5.18□□□□□ -1.58
SCAF11-211ENST00000547950 ZNF429Q86V71 674 aa5.18□□□□□ -1.58
SCAF11-211ENST00000547950 TCTEX1D1Q8N7M0 179 aa5.18□□□□□ -1.58
SCAF11-211ENST00000547950 OR4A4PQ8NGN8 299 aa5.18□□□□□ -1.58
SCAF11-211ENST00000547950 OR10R2Q8NGX6 335 aa5.18□□□□□ -1.58
SCAF11-211ENST00000547950 OR10J5Q8NHC4 309 aa5.18□□□□□ -1.58
SCAF11-211ENST00000547950 ARPC1AQ92747 370 aa5.18□□□□□ -1.58
SCAF11-211ENST00000547950 MISP3Q96FF7 219 aa5.18□□□□□ -1.58
SCAF11-211ENST00000547950 WWC2-AS2Q96NR7 200 aa5.18□□□□□ -1.58
SCAF11-211ENST00000547950 TOLLIPQ9H0E2 274 aa5.18□□□□□ -1.58
SCAF11-211ENST00000547950 ATG5Q9H1Y0 275 aa5.18□□□□□ -1.58
SCAF11-211ENST00000547950 SLC35D1Q9NTN3 355 aa5.18□□□□□ -1.58
SCAF11-211ENST00000547950 SDHAF2Q9NX18 166 aa5.18□□□□□ -1.58
SCAF11-211ENST00000547950 KCNK7Q9Y2U2 307 aa5.18□□□□□ -1.58
SCAF11-211ENST00000547950 RBM7Q9Y580 266 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms