RNA–Protein interactions for RNA: ENST00000547701.5

CTDSP2-203, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 988 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-203ENST00000547701 R3HDM4Q96D70 268 aa18.28■□□□□ 0.52
CTDSP2-203ENST00000547701 C5orf30Q96GV9 206 aa18.28■□□□□ 0.52
CTDSP2-203ENST00000547701 TNCP24821 2201 aa18.27■□□□□ 0.52
CTDSP2-203ENST00000547701 H7C2Y5 167 aa18.27■□□□□ 0.52
CTDSP2-203ENST00000547701 DUTP33316 252 aaKnown RBP18.27■□□□□ 0.52
CTDSP2-203ENST00000547701 RORCP51449 518 aa18.27■□□□□ 0.52
CTDSP2-203ENST00000547701 RPL23AP62750 156 aaKnown RBP18.27■□□□□ 0.52
CTDSP2-203ENST00000547701 TMEM177Q53S58 311 aa18.27■□□□□ 0.52
CTDSP2-203ENST00000547701 ZNF645Q8N7E2 425 aa18.27■□□□□ 0.52
CTDSP2-203ENST00000547701 DRAXINQ8NBI3 349 aaPredicted RBP18.27■□□□□ 0.52
CTDSP2-203ENST00000547701 FLYWCH2Q96CP2 140 aaKnown RBP18.27■□□□□ 0.52
CTDSP2-203ENST00000547701 RBMXL1Q96E39 390 aaKnown RBP18.27■□□□□ 0.52
CTDSP2-203ENST00000547701 NAT1P18440 290 aa18.26■□□□□ 0.51
CTDSP2-203ENST00000547701 LUMP51884 338 aaPredicted RBP18.26■□□□□ 0.51
CTDSP2-203ENST00000547701 C19orf54Q5BKX5 351 aa18.26■□□□□ 0.51
CTDSP2-203ENST00000547701 MYOZ3Q8TDC0 251 aa18.26■□□□□ 0.51
CTDSP2-203ENST00000547701 BCL7BQ9BQE9 202 aa18.26■□□□□ 0.51
CTDSP2-203ENST00000547701 SLC35D1Q9NTN3 355 aa18.26■□□□□ 0.51
CTDSP2-203ENST00000547701 LINC00527Q9UJ94 153 aa18.26■□□□□ 0.51
CTDSP2-203ENST00000547701 TPPPO94811 219 aa18.25■□□□□ 0.51
CTDSP2-203ENST00000547701 IGLV2-14P01704 120 aa18.25■□□□□ 0.51
CTDSP2-203ENST00000547701 PSMB8P28062 276 aa18.25■□□□□ 0.51
CTDSP2-203ENST00000547701 LINC00205P59089 165 aa18.25■□□□□ 0.51
CTDSP2-203ENST00000547701 PSG5Q15238 335 aa18.25■□□□□ 0.51
CTDSP2-203ENST00000547701 ZNF562Q6V9R5 426 aa18.25■□□□□ 0.51
CTDSP2-203ENST00000547701 GVQW1Q8N7I0 195 aa18.25■□□□□ 0.51
CTDSP2-203ENST00000547701 TCTEX1D1Q8N7M0 179 aa18.25■□□□□ 0.51
CTDSP2-203ENST00000547701 NAA50Q9GZZ1 169 aaKnown RBP18.25■□□□□ 0.51
CTDSP2-203ENST00000547701 RBM7Q9Y580 266 aaKnown RBP18.25■□□□□ 0.51
CTDSP2-203ENST00000547701 IGLV1-40P01703 118 aa18.24■□□□□ 0.51
CTDSP2-203ENST00000547701 CRYGBP07316 175 aa18.24■□□□□ 0.51
CTDSP2-203ENST00000547701 VDAC1P21796 283 aa18.24■□□□□ 0.51
CTDSP2-203ENST00000547701 CDX1P47902 265 aaPredicted RBP18.24■□□□□ 0.51
CTDSP2-203ENST00000547701 EIF4EBP1Q13541 118 aaPredicted RBP18.24■□□□□ 0.51
CTDSP2-203ENST00000547701 TMEM69Q5SWH9 247 aa18.24■□□□□ 0.51
CTDSP2-203ENST00000547701 KPRPQ5T749 579 aaPredicted RBP18.24■□□□□ 0.51
CTDSP2-203ENST00000547701 GPR107Q5VW38 600 aa18.24■□□□□ 0.51
CTDSP2-203ENST00000547701 OVCH2Q7RTZ1 564 aa18.24■□□□□ 0.51
CTDSP2-203ENST00000547701 GPR141Q7Z602 305 aa18.24■□□□□ 0.51
CTDSP2-203ENST00000547701 MINDY2Q8NBR6 621 aa18.24■□□□□ 0.51
CTDSP2-203ENST00000547701 OR5AP2Q8NGF4 316 aa18.24■□□□□ 0.51
CTDSP2-203ENST00000547701 GIMAP1Q8WWP7 306 aa18.24■□□□□ 0.51
CTDSP2-203ENST00000547701 SNAPC3Q92966 411 aa18.24■□□□□ 0.51
CTDSP2-203ENST00000547701 FBXL15Q9H469 300 aa18.24■□□□□ 0.51
CTDSP2-203ENST00000547701 NECAP2Q9NVZ3 263 aa18.24■□□□□ 0.51
CTDSP2-203ENST00000547701 NUBP2Q9Y5Y2 271 aa18.24■□□□□ 0.51
CTDSP2-203ENST00000547701 IGLV2-23P01705 113 aa18.23■□□□□ 0.51
CTDSP2-203ENST00000547701 ZNF182P17025 639 aaPredicted RBP18.23■□□□□ 0.51
CTDSP2-203ENST00000547701 NFYAP23511 347 aaPredicted RBP18.23■□□□□ 0.51
CTDSP2-203ENST00000547701 TAS2R20P59543 309 aa18.23■□□□□ 0.51
CTDSP2-203ENST00000547701 RPS16P62249 146 aaKnown RBP18.23■□□□□ 0.51
CTDSP2-203ENST00000547701 CX3CL1P78423 397 aa18.23■□□□□ 0.51
CTDSP2-203ENST00000547701 RTL8BQ17RB0 113 aa18.23■□□□□ 0.51
CTDSP2-203ENST00000547701 CXorf66Q5JRM2 361 aaPredicted RBP18.23■□□□□ 0.51
CTDSP2-203ENST00000547701 SAMD5Q5TGI4 173 aa18.23■□□□□ 0.51
CTDSP2-203ENST00000547701 AP3S1Q92572 193 aa18.23■□□□□ 0.51
CTDSP2-203ENST00000547701 RBMX2Q9Y388 322 aaKnown RBP18.23■□□□□ 0.51
CTDSP2-203ENST00000547701 LINC00473A8K010 186 aa18.22■□□□□ 0.51
CTDSP2-203ENST00000547701 ATP6V0E1O15342 81 aa18.22■□□□□ 0.51
CTDSP2-203ENST00000547701 AKIRIN2Q53H80 203 aa18.22■□□□□ 0.51
CTDSP2-203ENST00000547701 DHRS11Q6UWP2 260 aa18.22■□□□□ 0.51
CTDSP2-203ENST00000547701 ZBTB34Q8NCN2 500 aa18.22■□□□□ 0.51
CTDSP2-203ENST00000547701 OSR1Q8TAX0 266 aaPredicted RBP18.22■□□□□ 0.51
CTDSP2-203ENST00000547701 HSD17B10Q99714 261 aaKnown RBP18.22■□□□□ 0.51
CTDSP2-203ENST00000547701 ADAM30Q9UKF2 790 aa18.22■□□□□ 0.51
CTDSP2-203ENST00000547701 IGKV1D-13A0A0B4J2D9 117 aa18.21■□□□□ 0.51
CTDSP2-203ENST00000547701 FCN1O00602 326 aa18.21■□□□□ 0.51
CTDSP2-203ENST00000547701 EIF4EP06730 217 aaKnown RBP18.21■□□□□ 0.51
CTDSP2-203ENST00000547701 IGKV1-13P0DP09 117 aa18.21■□□□□ 0.51
CTDSP2-203ENST00000547701 PF4V1P10720 104 aa18.21■□□□□ 0.51
CTDSP2-203ENST00000547701 EGR2P11161 476 aaPredicted RBP18.21■□□□□ 0.51
CTDSP2-203ENST00000547701 ARPC4P59998 168 aa18.21■□□□□ 0.51
CTDSP2-203ENST00000547701 CBX3Q13185 183 aa18.21■□□□□ 0.51
CTDSP2-203ENST00000547701 MZT2AQ6P582 158 aa18.21■□□□□ 0.51
CTDSP2-203ENST00000547701 PPP1R27Q86WC6 154 aa18.21■□□□□ 0.51
CTDSP2-203ENST00000547701 GPX8Q8TED1 209 aa18.21■□□□□ 0.51
CTDSP2-203ENST00000547701 SCPEP1Q9HB40 452 aa18.21■□□□□ 0.51
CTDSP2-203ENST00000547701 COMMD3Q9UBI1 195 aa18.21■□□□□ 0.51
CTDSP2-203ENST00000547701 METTL1Q9UBP6 276 aaKnown RBP18.21■□□□□ 0.51
CTDSP2-203ENST00000547701 TRAV41A0A0B4J266 112 aa18.2■□□□□ 0.5
CTDSP2-203ENST00000547701 SMIM31A0A1B0GVY4 71 aa18.2■□□□□ 0.5
CTDSP2-203ENST00000547701 SULT1C2O00338 296 aa18.2■□□□□ 0.5
CTDSP2-203ENST00000547701 PTHLHP12272 177 aa18.2■□□□□ 0.5
CTDSP2-203ENST00000547701 PRSS3P35030 304 aa18.2■□□□□ 0.5
CTDSP2-203ENST00000547701 RPL5P46777 297 aaKnown RBP18.2■□□□□ 0.5
CTDSP2-203ENST00000547701 TMBIM6P55061 237 aa18.2■□□□□ 0.5
CTDSP2-203ENST00000547701 NDPQ00604 133 aa18.2■□□□□ 0.5
CTDSP2-203ENST00000547701 TMEM267Q0VDI3 215 aaPredicted RBP18.2■□□□□ 0.5
CTDSP2-203ENST00000547701 ZNF66Q6ZN08 573 aa18.2■□□□□ 0.5
CTDSP2-203ENST00000547701 ZNF695Q8IW36 515 aa18.2■□□□□ 0.5
CTDSP2-203ENST00000547701 TEX45Q8NA69 505 aa18.2■□□□□ 0.5
CTDSP2-203ENST00000547701 A0A1W2PRX2 142 aa18.19■□□□□ 0.5
CTDSP2-203ENST00000547701 MYCNOSP40205 109 aa18.19■□□□□ 0.5
CTDSP2-203ENST00000547701 KIAA0141Q14154 515 aaPredicted RBP18.19■□□□□ 0.5
CTDSP2-203ENST00000547701 CDK10Q15131 360 aa18.19■□□□□ 0.5
CTDSP2-203ENST00000547701 ETV3LQ6ZN32 361 aa18.19■□□□□ 0.5
CTDSP2-203ENST00000547701 BVESQ8NE79 360 aa18.19■□□□□ 0.5
CTDSP2-203ENST00000547701 RAB2BQ8WUD1 216 aa18.19■□□□□ 0.5
CTDSP2-203ENST00000547701 P2RX4Q99571 388 aa18.19■□□□□ 0.5
CTDSP2-203ENST00000547701 PRELID3BQ9Y3B1 194 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms