RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 LY6HO94772 140 aa10.59□□□□□ -0.71
SCAF11-209ENST00000547018 ARG1P05089 322 aa10.59□□□□□ -0.71
SCAF11-209ENST00000547018 ZNF134P52741 427 aa10.59□□□□□ -0.71
SCAF11-209ENST00000547018 CATR1Q13166 79 aa10.59□□□□□ -0.71
SCAF11-209ENST00000547018 PRAMEF5Q5TYX0 476 aa10.59□□□□□ -0.71
SCAF11-209ENST00000547018 SMIM8Q96KF7 97 aa10.59□□□□□ -0.71
SCAF11-209ENST00000547018 CABLES2Q9BTV7 478 aa10.59□□□□□ -0.71
SCAF11-209ENST00000547018 GCM1Q9NP62 436 aa10.59□□□□□ -0.71
SCAF11-209ENST00000547018 URGCP-MRPS24S4R325 110 aa10.59□□□□□ -0.71
SCAF11-209ENST00000547018 IGHV1-46P01743 117 aa10.59□□□□□ -0.71
SCAF11-209ENST00000547018 UBE2KP61086 200 aa10.59□□□□□ -0.71
SCAF11-209ENST00000547018 HMGN3Q15651 99 aa10.59□□□□□ -0.71
SCAF11-209ENST00000547018 OR5T1Q8NG75 326 aa10.59□□□□□ -0.71
SCAF11-209ENST00000547018 SAV1Q9H4B6 383 aaPredicted RBP10.59□□□□□ -0.71
SCAF11-209ENST00000547018 MBNL3Q9NUK0 354 aaKnown RBP10.59□□□□□ -0.71
SCAF11-209ENST00000547018 FLNCQ14315 2725 aa10.59□□□□□ -0.71
SCAF11-209ENST00000547018 RAB19A4D1S5 217 aa10.59□□□□□ -0.71
SCAF11-209ENST00000547018 MMP23AO75900 390 aa10.59□□□□□ -0.71
SCAF11-209ENST00000547018 GAPDHP04406 335 aaKnown RBP10.59□□□□□ -0.71
SCAF11-209ENST00000547018 RND3P61587 244 aa10.59□□□□□ -0.71
SCAF11-209ENST00000547018 ZNF645Q8N7E2 425 aa10.59□□□□□ -0.71
SCAF11-209ENST00000547018 RBKSQ9H477 322 aa10.59□□□□□ -0.71
SCAF11-209ENST00000547018 TRAV3A0A0B4J244 114 aa10.58□□□□□ -0.72
SCAF11-209ENST00000547018 DNASE2O00115 360 aaPredicted RBP10.58□□□□□ -0.72
SCAF11-209ENST00000547018 IFNA10P01566 189 aa10.58□□□□□ -0.72
SCAF11-209ENST00000547018 DANCRP0C864 163 aa10.58□□□□□ -0.72
SCAF11-209ENST00000547018 HOXB1P14653 301 aaPredicted RBP10.58□□□□□ -0.72
SCAF11-209ENST00000547018 KRTCAP3Q53RY4 240 aa10.58□□□□□ -0.72
SCAF11-209ENST00000547018 SLC35E4Q6ICL7 350 aa10.58□□□□□ -0.72
SCAF11-209ENST00000547018 ZNF880Q6PDB4 577 aa10.58□□□□□ -0.72
SCAF11-209ENST00000547018 Q6ZS49 121 aa10.58□□□□□ -0.72
SCAF11-209ENST00000547018 ODF3L1Q8IXM7 274 aa10.58□□□□□ -0.72
SCAF11-209ENST00000547018 WFIKKN1Q96NZ8 548 aa10.58□□□□□ -0.72
SCAF11-209ENST00000547018 OR4C12Q96R67 309 aa10.58□□□□□ -0.72
SCAF11-209ENST00000547018 RNF7Q9UBF6 113 aa10.58□□□□□ -0.72
SCAF11-209ENST00000547018 LRRK2Q5S007 2527 aa10.58□□□□□ -0.72
SCAF11-209ENST00000547018 SRRM5B3KS81 715 aa10.58□□□□□ -0.72
SCAF11-209ENST00000547018 UMAD1C9J7I0 102 aa10.58□□□□□ -0.72
SCAF11-209ENST00000547018 PLAUP00749 431 aa10.58□□□□□ -0.72
SCAF11-209ENST00000547018 SPP1P10451 314 aa10.58□□□□□ -0.72
SCAF11-209ENST00000547018 CCL3L1P16619 93 aa10.58□□□□□ -0.72
SCAF11-209ENST00000547018 TNFSF4P23510 183 aa10.58□□□□□ -0.72
SCAF11-209ENST00000547018 NKX6-1P78426 367 aaPredicted RBP10.58□□□□□ -0.72
SCAF11-209ENST00000547018 BTNL8Q6UX41 500 aa10.58□□□□□ -0.72
SCAF11-209ENST00000547018 PPP1R35Q8TAP8 253 aa10.58□□□□□ -0.72
SCAF11-209ENST00000547018 SFXN3Q9BWM7 321 aa10.58□□□□□ -0.72
SCAF11-209ENST00000547018 MLXQ9UH92 298 aa10.58□□□□□ -0.72
SCAF11-209ENST00000547018 WSB1Q9Y6I7 421 aa10.58□□□□□ -0.72
SCAF11-209ENST00000547018 CSPG4Q6UVK1 2322 aa10.57□□□□□ -0.72
SCAF11-209ENST00000547018 J3QW42 95 aa10.57□□□□□ -0.72
SCAF11-209ENST00000547018 APELAP0DMC3 54 aa10.57□□□□□ -0.72
SCAF11-209ENST00000547018 BAXQ07812 192 aa10.57□□□□□ -0.72
SCAF11-209ENST00000547018 MARVELD3Q96A59 401 aa10.57□□□□□ -0.72
SCAF11-209ENST00000547018 SAT2Q96F10 170 aaPredicted RBP10.57□□□□□ -0.72
SCAF11-209ENST00000547018 HEYLQ9NQ87 328 aaPredicted RBP10.57□□□□□ -0.72
SCAF11-209ENST00000547018 A0A1B0GU03 582 aa10.57□□□□□ -0.72
SCAF11-209ENST00000547018 MBNL2Q5VZF2 373 aaKnown RBP10.57□□□□□ -0.72
SCAF11-209ENST00000547018 OR10Z1Q8NGY1 313 aa10.57□□□□□ -0.72
SCAF11-209ENST00000547018 R3HDM4Q96D70 268 aa10.57□□□□□ -0.72
SCAF11-209ENST00000547018 RNF115Q9Y4L5 304 aa10.57□□□□□ -0.72
SCAF11-209ENST00000547018 MARCH11A6NNE9 402 aa10.57□□□□□ -0.72
SCAF11-209ENST00000547018 H7C2Y5 167 aa10.57□□□□□ -0.72
SCAF11-209ENST00000547018 ZNF737O75373 536 aa10.57□□□□□ -0.72
SCAF11-209ENST00000547018 SEC11BP0C7V7 166 aa10.57□□□□□ -0.72
SCAF11-209ENST00000547018 TIMP3P35625 211 aa10.57□□□□□ -0.72
SCAF11-209ENST00000547018 SLC38A11Q08AI6 406 aa10.57□□□□□ -0.72
SCAF11-209ENST00000547018 C14orf79Q96F83 325 aa10.57□□□□□ -0.72
SCAF11-209ENST00000547018 QTRT1Q9BXR0 403 aaKnown RBP10.57□□□□□ -0.72
SCAF11-209ENST00000547018 ZNF665Q9H7R5 613 aa10.57□□□□□ -0.72
SCAF11-209ENST00000547018 SLC25A22Q9H936 323 aa10.57□□□□□ -0.72
SCAF11-209ENST00000547018 SAP30LQ9HAJ7 183 aa10.57□□□□□ -0.72
SCAF11-209ENST00000547018 PARP11Q9NR21 331 aa10.57□□□□□ -0.72
SCAF11-209ENST00000547018 CALYQ9NYX4 217 aa10.57□□□□□ -0.72
SCAF11-209ENST00000547018 TRIM77I1YAP6 450 aa10.56□□□□□ -0.72
SCAF11-209ENST00000547018 SULT1A1P50225 295 aa10.56□□□□□ -0.72
SCAF11-209ENST00000547018 LY6DQ14210 128 aa10.56□□□□□ -0.72
SCAF11-209ENST00000547018 ZNF674Q2M3X9 581 aa10.56□□□□□ -0.72
SCAF11-209ENST00000547018 FAM122CQ6P4D5 195 aa10.56□□□□□ -0.72
SCAF11-209ENST00000547018 ABHD12Q8N2K0 398 aa10.56□□□□□ -0.72
SCAF11-209ENST00000547018 EIF4E3Q8N5X7 224 aaKnown RBP10.56□□□□□ -0.72
SCAF11-209ENST00000547018 GINS3Q9BRX5 216 aa10.56□□□□□ -0.72
SCAF11-209ENST00000547018 HES4Q9HCC6 221 aa10.56□□□□□ -0.72
SCAF11-209ENST00000547018 RPRMQ9NS64 109 aa10.56□□□□□ -0.72
SCAF11-209ENST00000547018 RNF212BA8MTL3 300 aa10.56□□□□□ -0.72
SCAF11-209ENST00000547018 MGST3O14880 152 aa10.56□□□□□ -0.72
SCAF11-209ENST00000547018 DVL1P1P54792 670 aaPredicted RBP10.56□□□□□ -0.72
SCAF11-209ENST00000547018 BRWD1-AS2P59051 145 aa10.56□□□□□ -0.72
SCAF11-209ENST00000547018 MSMO1Q15800 293 aa10.56□□□□□ -0.72
SCAF11-209ENST00000547018 IL34Q6ZMJ4 242 aa10.56□□□□□ -0.72
SCAF11-209ENST00000547018 ZNF295-AS1Q8N0V1 137 aa10.56□□□□□ -0.72
SCAF11-209ENST00000547018 OR4A16Q8NH70 328 aa10.56□□□□□ -0.72
SCAF11-209ENST00000547018 TMPRSS5Q9H3S3 457 aa10.56□□□□□ -0.72
SCAF11-209ENST00000547018 ITPR1Q14643 2758 aa10.56□□□□□ -0.72
SCAF11-209ENST00000547018 TRBV6-6A0A0A6YYG2 114 aa10.55□□□□□ -0.72
SCAF11-209ENST00000547018 SNAPINO95295 136 aa10.55□□□□□ -0.72
SCAF11-209ENST00000547018 IFNA4P05014 189 aa10.55□□□□□ -0.72
SCAF11-209ENST00000547018 SNCAP37840 140 aa10.55□□□□□ -0.72
SCAF11-209ENST00000547018 TNFRSF9Q07011 255 aa10.55□□□□□ -0.72
SCAF11-209ENST00000547018 PEA15Q15121 130 aa10.55□□□□□ -0.72
SCAF11-209ENST00000547018 CLEC12BQ2HXU8 276 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms