RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 RPLP1P05386 114 aaKnown RBP11.57□□□□□ -0.56
CCDC38-205ENST00000546947 PSMB8P28062 276 aa11.57□□□□□ -0.56
CCDC38-205ENST00000546947 PPIFP30405 207 aaKnown RBP11.57□□□□□ -0.56
CCDC38-205ENST00000546947 TGFBR1P36897 503 aa11.57□□□□□ -0.56
CCDC38-205ENST00000546947 CDX1P47902 265 aaPredicted RBP11.57□□□□□ -0.56
CCDC38-205ENST00000546947 CRIP2P52943 208 aaPredicted RBP11.57□□□□□ -0.56
CCDC38-205ENST00000546947 RPS16P62249 146 aaKnown RBP11.57□□□□□ -0.56
CCDC38-205ENST00000546947 CNIH2Q6PI25 160 aa11.57□□□□□ -0.56
CCDC38-205ENST00000546947 C18orf65Q6ZTR6 163 aa11.57□□□□□ -0.56
CCDC38-205ENST00000546947 C8orf86Q6ZUL3 223 aa11.57□□□□□ -0.56
CCDC38-205ENST00000546947 LINC00482Q8N8I6 264 aa11.57□□□□□ -0.56
CCDC38-205ENST00000546947 FLYWCH2Q96CP2 140 aaKnown RBP11.57□□□□□ -0.56
CCDC38-205ENST00000546947 TRAV18A0A075B6X5 111 aa11.56□□□□□ -0.56
CCDC38-205ENST00000546947 TRAV41A0A0B4J266 112 aa11.56□□□□□ -0.56
CCDC38-205ENST00000546947 G3V318 75 aa11.56□□□□□ -0.56
CCDC38-205ENST00000546947 SSX5O60225 188 aa11.56□□□□□ -0.56
CCDC38-205ENST00000546947 RRASP10301 218 aa11.56□□□□□ -0.56
CCDC38-205ENST00000546947 IGLL1P15814 213 aa11.56□□□□□ -0.56
CCDC38-205ENST00000546947 RPS19P39019 145 aaKnown RBP11.56□□□□□ -0.56
CCDC38-205ENST00000546947 LINC00205P59089 165 aa11.56□□□□□ -0.56
CCDC38-205ENST00000546947 LSM3P62310 102 aaKnown RBP11.56□□□□□ -0.56
CCDC38-205ENST00000546947 CX3CL1P78423 397 aa11.56□□□□□ -0.56
CCDC38-205ENST00000546947 CBX3Q13185 183 aa11.56□□□□□ -0.56
CCDC38-205ENST00000546947 PSG5Q15238 335 aa11.56□□□□□ -0.56
CCDC38-205ENST00000546947 REC114Q7Z4M0 266 aa11.56□□□□□ -0.56
CCDC38-205ENST00000546947 MRPL41Q8IXM3 137 aaKnown RBP11.56□□□□□ -0.56
CCDC38-205ENST00000546947 ADTRPQ96IZ2 230 aa11.56□□□□□ -0.56
CCDC38-205ENST00000546947 METTL1Q9UBP6 276 aaKnown RBP11.56□□□□□ -0.56
CCDC38-205ENST00000546947 ANXA10Q9UJ72 324 aa11.56□□□□□ -0.56
CCDC38-205ENST00000546947 WSB1Q9Y6I7 421 aa11.56□□□□□ -0.56
CCDC38-205ENST00000546947 SLC22A5O76082 557 aa11.55□□□□□ -0.56
CCDC38-205ENST00000546947 LGALS7P47929 136 aa11.55□□□□□ -0.56
CCDC38-205ENST00000546947 LUMP51884 338 aaPredicted RBP11.55□□□□□ -0.56
CCDC38-205ENST00000546947 NDPQ00604 133 aa11.55□□□□□ -0.56
CCDC38-205ENST00000546947 TMEM267Q0VDI3 215 aaPredicted RBP11.55□□□□□ -0.56
CCDC38-205ENST00000546947 TMEM65Q6PI78 240 aa11.55□□□□□ -0.56
CCDC38-205ENST00000546947 LCNL1Q6ZST4 164 aa11.55□□□□□ -0.56
CCDC38-205ENST00000546947 ZNF645Q8N7E2 425 aa11.55□□□□□ -0.56
CCDC38-205ENST00000546947 TCTEX1D1Q8N7M0 179 aa11.55□□□□□ -0.56
CCDC38-205ENST00000546947 MYOZ3Q8TDC0 251 aa11.55□□□□□ -0.56
CCDC38-205ENST00000546947 C5orf30Q96GV9 206 aa11.55□□□□□ -0.56
CCDC38-205ENST00000546947 P2RX4Q99571 388 aa11.55□□□□□ -0.56
CCDC38-205ENST00000546947 OR2W1Q9Y3N9 320 aa11.55□□□□□ -0.56
CCDC38-205ENST00000546947 FCN1O00602 326 aa11.54□□□□□ -0.56
CCDC38-205ENST00000546947 CA2P00918 260 aa11.54□□□□□ -0.56
CCDC38-205ENST00000546947 IGLV1-40P01703 118 aa11.54□□□□□ -0.56
CCDC38-205ENST00000546947 HLA-DQB1P01920 261 aa11.54□□□□□ -0.56
CCDC38-205ENST00000546947 NFYAP23511 347 aaPredicted RBP11.54□□□□□ -0.56
CCDC38-205ENST00000546947 DUTP33316 252 aaKnown RBP11.54□□□□□ -0.56
CCDC38-205ENST00000546947 RTL8BQ17RB0 113 aa11.54□□□□□ -0.56
CCDC38-205ENST00000546947 TMEM177Q53S58 311 aa11.54□□□□□ -0.56
CCDC38-205ENST00000546947 C19orf54Q5BKX5 351 aa11.54□□□□□ -0.56
CCDC38-205ENST00000546947 UBE2NLQ5JXB2 153 aa11.54□□□□□ -0.56
CCDC38-205ENST00000546947 ZNF562Q6V9R5 426 aa11.54□□□□□ -0.56
CCDC38-205ENST00000546947 MINDY2Q8NBR6 621 aa11.54□□□□□ -0.56
CCDC38-205ENST00000546947 BEST4Q8NFU0 473 aa11.54□□□□□ -0.56
CCDC38-205ENST00000546947 OR13F1Q8NGS4 319 aa11.54□□□□□ -0.56
CCDC38-205ENST00000546947 S100A16Q96FQ6 103 aaKnown RBP11.54□□□□□ -0.56
CCDC38-205ENST00000546947 HARBI1Q96MB7 349 aa11.54□□□□□ -0.56
CCDC38-205ENST00000546947 CLCC1Q96S66 551 aa11.54□□□□□ -0.56
CCDC38-205ENST00000546947 FUNDC2Q9BWH2 189 aa11.54□□□□□ -0.56
CCDC38-205ENST00000546947 GPR61Q9BZJ8 451 aa11.54□□□□□ -0.56
CCDC38-205ENST00000546947 AUNIPQ9H7T9 357 aa11.54□□□□□ -0.56
CCDC38-205ENST00000546947 NECAP2Q9NVZ3 263 aa11.54□□□□□ -0.56
CCDC38-205ENST00000546947 FBXO7Q9Y3I1 522 aa11.54□□□□□ -0.56
CCDC38-205ENST00000546947 NUBP2Q9Y5Y2 271 aa11.54□□□□□ -0.56
CCDC38-205ENST00000546947 CCL24O00175 119 aa11.53□□□□□ -0.56
CCDC38-205ENST00000546947 XRCC3O43542 346 aa11.53□□□□□ -0.56
CCDC38-205ENST00000546947 SLC25A17O43808 307 aa11.53□□□□□ -0.56
CCDC38-205ENST00000546947 EGR2P11161 476 aaPredicted RBP11.53□□□□□ -0.56
CCDC38-205ENST00000546947 CBX5P45973 191 aa11.53□□□□□ -0.56
CCDC38-205ENST00000546947 ARPC4P59998 168 aa11.53□□□□□ -0.56
CCDC38-205ENST00000546947 ECSCRQ19T08 205 aa11.53□□□□□ -0.56
CCDC38-205ENST00000546947 FOXB2Q5VYV0 432 aa11.53□□□□□ -0.56
CCDC38-205ENST00000546947 PPP1R27Q86WC6 154 aa11.53□□□□□ -0.56
CCDC38-205ENST00000546947 HOGA1Q86XE5 327 aa11.53□□□□□ -0.56
CCDC38-205ENST00000546947 GVQW1Q8N7I0 195 aa11.53□□□□□ -0.56
CCDC38-205ENST00000546947 ZNF491Q8N8L2 437 aa11.53□□□□□ -0.56
CCDC38-205ENST00000546947 BVESQ8NE79 360 aa11.53□□□□□ -0.56
CCDC38-205ENST00000546947 ABHD5Q8WTS1 349 aa11.53□□□□□ -0.56
CCDC38-205ENST00000546947 C4orf3Q8WVX3 66 aa11.53□□□□□ -0.56
CCDC38-205ENST00000546947 DDB2Q92466 427 aa11.53□□□□□ -0.56
CCDC38-205ENST00000546947 SLC25A46Q96AG3 418 aa11.53□□□□□ -0.56
CCDC38-205ENST00000546947 RAX2Q96IS3 184 aa11.53□□□□□ -0.56
CCDC38-205ENST00000546947 UBE2E2Q96LR5 201 aa11.53□□□□□ -0.56
CCDC38-205ENST00000546947 MCRIP2Q9BUT9 160 aaKnown RBP11.53□□□□□ -0.56
CCDC38-205ENST00000546947 NOTCH1P46531 2555 aa11.53□□□□□ -0.56
CCDC38-205ENST00000546947 A0A1W2PN81 502 aa11.52□□□□□ -0.57
CCDC38-205ENST00000546947 LINC00473A8K010 186 aa11.52□□□□□ -0.57
CCDC38-205ENST00000546947 J3QRK9 145 aa11.52□□□□□ -0.57
CCDC38-205ENST00000546947 SHOXO15266 292 aa11.52□□□□□ -0.57
CCDC38-205ENST00000546947 TUSC2O75896 110 aa11.52□□□□□ -0.57
CCDC38-205ENST00000546947 IGLV2-23P01705 113 aa11.52□□□□□ -0.57
CCDC38-205ENST00000546947 SMIM18P0DKX4 95 aa11.52□□□□□ -0.57
CCDC38-205ENST00000546947 CHRNA7P36544 502 aa11.52□□□□□ -0.57
CCDC38-205ENST00000546947 RAB9AP51151 201 aa11.52□□□□□ -0.57
CCDC38-205ENST00000546947 KIAA0141Q14154 515 aaPredicted RBP11.52□□□□□ -0.57
CCDC38-205ENST00000546947 AKIRIN2Q53H80 203 aa11.52□□□□□ -0.57
CCDC38-205ENST00000546947 PYHIN1Q6K0P9 492 aa11.52□□□□□ -0.57
CCDC38-205ENST00000546947 OR5M8Q8NGP6 311 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms