RNA–Protein interactions for RNA: ENST00000546942.1

SRSF9-202, Transcript of serine and arginine rich splicing factor 9, humanhuman

TSL 1 (best)

Gene SRSF9, Length 946 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF9-202ENST00000546942 OR2D2Q9H210 308 aa20.58■□□□□ 0.89
SRSF9-202ENST00000546942 ELF5Q9UKW6 265 aaPredicted RBP20.58■□□□□ 0.89
SRSF9-202ENST00000546942 GAB2Q9UQC2 676 aa20.58■□□□□ 0.89
SRSF9-202ENST00000546942 VSIG4Q9Y279 399 aa20.58■□□□□ 0.89
SRSF9-202ENST00000546942 APOA2P02652 100 aa20.57■□□□□ 0.88
SRSF9-202ENST00000546942 KIAA0141Q14154 515 aaPredicted RBP20.57■□□□□ 0.88
SRSF9-202ENST00000546942 MINDY2Q8NBR6 621 aa20.57■□□□□ 0.88
SRSF9-202ENST00000546942 MYOZ3Q8TDC0 251 aa20.57■□□□□ 0.88
SRSF9-202ENST00000546942 RNF5Q99942 180 aa20.57■□□□□ 0.88
SRSF9-202ENST00000546942 GINS4Q9BRT9 223 aa20.57■□□□□ 0.88
SRSF9-202ENST00000546942 FAM103A1Q9BTL3 118 aaKnown RBP20.57■□□□□ 0.88
SRSF9-202ENST00000546942 RBM7Q9Y580 266 aaKnown RBP20.57■□□□□ 0.88
SRSF9-202ENST00000546942 TRBV6-7A0A0A0MS04 114 aa20.56■□□□□ 0.88
SRSF9-202ENST00000546942 LOC100506127A0A0U1RQW1 187 aa20.56■□□□□ 0.88
SRSF9-202ENST00000546942 SDC2P34741 201 aa20.56■□□□□ 0.88
SRSF9-202ENST00000546942 SCAND1P57086 179 aa20.56■□□□□ 0.88
SRSF9-202ENST00000546942 ARL6IP1Q15041 203 aa20.56■□□□□ 0.88
SRSF9-202ENST00000546942 OR1N2Q8NGR9 330 aa20.56■□□□□ 0.88
SRSF9-202ENST00000546942 TSNAXQ99598 290 aaKnown RBP20.56■□□□□ 0.88
SRSF9-202ENST00000546942 CABLES2Q9BTV7 478 aa20.56■□□□□ 0.88
SRSF9-202ENST00000546942 SLC35D1Q9NTN3 355 aa20.56■□□□□ 0.88
SRSF9-202ENST00000546942 DAPK2Q9UIK4 370 aa20.56■□□□□ 0.88
SRSF9-202ENST00000546942 COL7A1Q02388 2944 aa20.55■□□□□ 0.88
SRSF9-202ENST00000546942 GNB1P62873 340 aa20.55■□□□□ 0.88
SRSF9-202ENST00000546942 CDNFQ49AH0 187 aa20.55■□□□□ 0.88
SRSF9-202ENST00000546942 SFXN4Q6P4A7 337 aa20.55■□□□□ 0.88
SRSF9-202ENST00000546942 PPP1R27Q86WC6 154 aa20.55■□□□□ 0.88
SRSF9-202ENST00000546942 ZNF436-AS1Q8NC38 126 aaPredicted RBP20.55■□□□□ 0.88
SRSF9-202ENST00000546942 FLYWCH2Q96CP2 140 aaKnown RBP20.55■□□□□ 0.88
SRSF9-202ENST00000546942 SDHAF2Q9NX18 166 aa20.55■□□□□ 0.88
SRSF9-202ENST00000546942 FOXA2Q9Y261 457 aaPredicted RBP20.55■□□□□ 0.88
SRSF9-202ENST00000546942 SEC14L6B5MCN3 397 aa20.54■□□□□ 0.88
SRSF9-202ENST00000546942 I3L521 148 aa20.54■□□□□ 0.88
SRSF9-202ENST00000546942 SOX15O60248 233 aa20.54■□□□□ 0.88
SRSF9-202ENST00000546942 SCGNO76038 276 aa20.54■□□□□ 0.88
SRSF9-202ENST00000546942 CA2P00918 260 aa20.54■□□□□ 0.88
SRSF9-202ENST00000546942 EGR2P11161 476 aaPredicted RBP20.54■□□□□ 0.88
SRSF9-202ENST00000546942 DGCR2P98153 550 aa20.54■□□□□ 0.88
SRSF9-202ENST00000546942 TMEM267Q0VDI3 215 aaPredicted RBP20.54■□□□□ 0.88
SRSF9-202ENST00000546942 UNQ5815/PRO19632Q6UWF5 114 aa20.54■□□□□ 0.88
SRSF9-202ENST00000546942 PDPNQ86YL7 162 aa20.54■□□□□ 0.88
SRSF9-202ENST00000546942 YIPF6Q96EC8 236 aa20.54■□□□□ 0.88
SRSF9-202ENST00000546942 TOLLIPQ9H0E2 274 aa20.54■□□□□ 0.88
SRSF9-202ENST00000546942 ALX4Q9H161 411 aaPredicted RBP20.54■□□□□ 0.88
SRSF9-202ENST00000546942 TPSG1Q9NRR2 321 aa20.54■□□□□ 0.88
SRSF9-202ENST00000546942 NUBP2Q9Y5Y2 271 aa20.54■□□□□ 0.88
SRSF9-202ENST00000546942 IGKV1D-8A0A087WSZ0 117 aa20.53■□□□□ 0.88
SRSF9-202ENST00000546942 SLC25A17O43808 307 aa20.53■□□□□ 0.88
SRSF9-202ENST00000546942 AIREO43918 545 aa20.53■□□□□ 0.88
SRSF9-202ENST00000546942 MXD1Q05195 221 aa20.53■□□□□ 0.88
SRSF9-202ENST00000546942 FHL3Q13643 280 aa20.53■□□□□ 0.88
SRSF9-202ENST00000546942 ACTBL2Q562R1 376 aa20.53■□□□□ 0.88
SRSF9-202ENST00000546942 C19orf54Q5BKX5 351 aa20.53■□□□□ 0.88
SRSF9-202ENST00000546942 C9orf66Q5T8R8 295 aa20.53■□□□□ 0.88
SRSF9-202ENST00000546942 CROCCP3Q8IVE0 287 aa20.53■□□□□ 0.88
SRSF9-202ENST00000546942 LFNGQ8NES3 379 aa20.53■□□□□ 0.88
SRSF9-202ENST00000546942 CENPOQ9BU64 300 aa20.53■□□□□ 0.88
SRSF9-202ENST00000546942 ST6GALNAC5Q9BVH7 336 aa20.53■□□□□ 0.88
SRSF9-202ENST00000546942 J3QRK9 145 aa20.52■□□□□ 0.88
SRSF9-202ENST00000546942 ZNF616Q08AN1 781 aa20.52■□□□□ 0.88
SRSF9-202ENST00000546942 ZNF562Q6V9R5 426 aa20.52■□□□□ 0.88
SRSF9-202ENST00000546942 C5orf30Q96GV9 206 aa20.52■□□□□ 0.88
SRSF9-202ENST00000546942 MS4A10Q96PG2 267 aa20.52■□□□□ 0.88
SRSF9-202ENST00000546942 RNF167Q9H6Y7 350 aa20.52■□□□□ 0.88
SRSF9-202ENST00000546942 ZMAT5Q9UDW3 170 aaKnown RBP20.52■□□□□ 0.88
SRSF9-202ENST00000546942 CRIP2P52943 208 aaPredicted RBP20.51■□□□□ 0.87
SRSF9-202ENST00000546942 ZNF260Q3ZCT1 412 aa20.51■□□□□ 0.87
SRSF9-202ENST00000546942 GRPEL2Q8TAA5 225 aa20.51■□□□□ 0.87
SRSF9-202ENST00000546942 LGALS14Q8TCE9 139 aa20.51■□□□□ 0.87
SRSF9-202ENST00000546942 SPDEFO95238 335 aa20.5■□□□□ 0.87
SRSF9-202ENST00000546942 CLEC2LP0C7M8 214 aa20.5■□□□□ 0.87
SRSF9-202ENST00000546942 OR8U8P0C7N1 319 aa20.5■□□□□ 0.87
SRSF9-202ENST00000546942 RUNX1Q01196 453 aa20.5■□□□□ 0.87
SRSF9-202ENST00000546942 FXYD3Q14802 87 aa20.5■□□□□ 0.87
SRSF9-202ENST00000546942 TCTEX1D1Q8N7M0 179 aa20.5■□□□□ 0.87
SRSF9-202ENST00000546942 BVESQ8NE79 360 aa20.5■□□□□ 0.87
SRSF9-202ENST00000546942 ARPC1AQ92747 370 aa20.5■□□□□ 0.87
SRSF9-202ENST00000546942 ETV7Q9Y603 341 aa20.5■□□□□ 0.87
SRSF9-202ENST00000546942 CNIH1O95406 144 aa20.49■□□□□ 0.87
SRSF9-202ENST00000546942 DIRAS3O95661 229 aa20.49■□□□□ 0.87
SRSF9-202ENST00000546942 CBX3Q13185 183 aa20.49■□□□□ 0.87
SRSF9-202ENST00000546942 SRSF7Q16629 238 aaKnown RBP eCLIP20.49■□□□□ 0.87
SRSF9-202ENST00000546942 AKIRIN2Q53H80 203 aa20.49■□□□□ 0.87
SRSF9-202ENST00000546942 ASPHD1Q5U4P2 390 aa20.49■□□□□ 0.87
SRSF9-202ENST00000546942 HACD4Q5VWC8 232 aa20.49■□□□□ 0.87
SRSF9-202ENST00000546942 H1FOOQ8IZA3 346 aaPredicted RBP20.49■□□□□ 0.87
SRSF9-202ENST00000546942 NUDCD2Q8WVJ2 157 aa20.49■□□□□ 0.87
SRSF9-202ENST00000546942 HARBI1Q96MB7 349 aa20.49■□□□□ 0.87
SRSF9-202ENST00000546942 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.49■□□□□ 0.87
SRSF9-202ENST00000546942 TMEM235A6NFC5 223 aa20.48■□□□□ 0.87
SRSF9-202ENST00000546942 SHOXO15266 292 aa20.48■□□□□ 0.87
SRSF9-202ENST00000546942 IGHV3-11P01762 117 aa20.48■□□□□ 0.87
SRSF9-202ENST00000546942 DTYMKP23919 212 aa20.48■□□□□ 0.87
SRSF9-202ENST00000546942 ECI1P42126 302 aa20.48■□□□□ 0.87
SRSF9-202ENST00000546942 PJVKQ0ZLH3 352 aa20.48■□□□□ 0.87
SRSF9-202ENST00000546942 Q6ZS49 121 aa20.48■□□□□ 0.87
SRSF9-202ENST00000546942 PRR25Q96S07 402 aa20.48■□□□□ 0.87
SRSF9-202ENST00000546942 ZNF355PQ9NSJ1 428 aa20.48■□□□□ 0.87
SRSF9-202ENST00000546942 SCOCQ9UIL1 159 aa20.48■□□□□ 0.87
SRSF9-202ENST00000546942 ARPC1BO15143 372 aaKnown RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms