RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 JAGN1Q8N5M9 183 aa10.99□□□□□ -0.65
RTN3-214ENST00000545432 DRAXINQ8NBI3 349 aaPredicted RBP10.99□□□□□ -0.65
RTN3-214ENST00000545432 IL1F10Q8WWZ1 152 aa10.99□□□□□ -0.65
RTN3-214ENST00000545432 EDARADDQ8WWZ3 215 aa10.99□□□□□ -0.65
RTN3-214ENST00000545432 Q96MT0 163 aa10.99□□□□□ -0.65
RTN3-214ENST00000545432 RPL36Q9Y3U8 105 aaKnown RBP10.99□□□□□ -0.65
RTN3-214ENST00000545432 FAT2Q9NYQ8 4349 aa10.98□□□□□ -0.65
RTN3-214ENST00000545432 LOC102724200A0A096LPH7 203 aaPredicted RBP10.98□□□□□ -0.65
RTN3-214ENST00000545432 FAM223BA6NKX1 122 aa10.98□□□□□ -0.65
RTN3-214ENST00000545432 LALBAP00709 142 aa10.98□□□□□ -0.65
RTN3-214ENST00000545432 BMI1P35226 326 aa10.98□□□□□ -0.65
RTN3-214ENST00000545432 YIF1BQ5BJH7 314 aa10.98□□□□□ -0.65
RTN3-214ENST00000545432 SLC16A13Q7RTY0 426 aa10.98□□□□□ -0.65
RTN3-214ENST00000545432 LYG2Q86SG7 212 aa10.98□□□□□ -0.65
RTN3-214ENST00000545432 FAM223AQ8IWN6 122 aa10.98□□□□□ -0.65
RTN3-214ENST00000545432 ZNF485Q8NCK3 441 aa10.98□□□□□ -0.65
RTN3-214ENST00000545432 WDR89Q96FK6 387 aaPredicted RBP10.98□□□□□ -0.65
RTN3-214ENST00000545432 PGLYRP3Q96LB9 341 aa10.98□□□□□ -0.65
RTN3-214ENST00000545432 UQCC2Q9BRT2 126 aa10.98□□□□□ -0.65
RTN3-214ENST00000545432 FAAP24Q9BTP7 215 aa10.98□□□□□ -0.65
RTN3-214ENST00000545432 AKIP1Q9NQ31 210 aa10.98□□□□□ -0.65
RTN3-214ENST00000545432 CKLFQ9UBR5 152 aa10.98□□□□□ -0.65
RTN3-214ENST00000545432 SAC3D1A6NKF1 404 aa10.97□□□□□ -0.65
RTN3-214ENST00000545432 SRRM4A7MD48 611 aaKnown RBP10.97□□□□□ -0.65
RTN3-214ENST00000545432 OR9G9P0C7N8 305 aa10.97□□□□□ -0.65
RTN3-214ENST00000545432 ETV1P50549 477 aa10.97□□□□□ -0.65
RTN3-214ENST00000545432 ZNF45Q02386 682 aa10.97□□□□□ -0.65
RTN3-214ENST00000545432 TMEM177Q53S58 311 aa10.97□□□□□ -0.65
RTN3-214ENST00000545432 FAM209BQ5JX69 171 aa10.97□□□□□ -0.65
RTN3-214ENST00000545432 OR2G6Q5TZ20 316 aa10.97□□□□□ -0.65
RTN3-214ENST00000545432 MOB1BQ7L9L4 216 aa10.97□□□□□ -0.65
RTN3-214ENST00000545432 KCNG3Q8TAE7 436 aa10.97□□□□□ -0.65
RTN3-214ENST00000545432 NEDD4LQ96PU5 975 aa10.97□□□□□ -0.65
RTN3-214ENST00000545432 RIMS4Q9H426 269 aaPredicted RBP10.97□□□□□ -0.65
RTN3-214ENST00000545432 COA4Q9NYJ1 87 aa10.97□□□□□ -0.65
RTN3-214ENST00000545432 DYNC1H1Q14204 4646 aaKnown RBP10.97□□□□□ -0.65
RTN3-214ENST00000545432 APOA2P02652 100 aa10.96□□□□□ -0.65
RTN3-214ENST00000545432 CD37P11049 281 aa10.96□□□□□ -0.65
RTN3-214ENST00000545432 EDN2P20800 178 aa10.96□□□□□ -0.65
RTN3-214ENST00000545432 ZBTB25P24278 435 aa10.96□□□□□ -0.65
RTN3-214ENST00000545432 DCKP27707 260 aa10.96□□□□□ -0.65
RTN3-214ENST00000545432 CEACAM6P40199 344 aa10.96□□□□□ -0.65
RTN3-214ENST00000545432 GUCA2BQ16661 112 aa10.96□□□□□ -0.65
RTN3-214ENST00000545432 ZIK1Q3SY52 487 aaPredicted RBP10.96□□□□□ -0.65
RTN3-214ENST00000545432 TMPRSS11AQ6ZMR5 421 aa10.96□□□□□ -0.65
RTN3-214ENST00000545432 C6orf201Q7Z4U5 140 aa10.96□□□□□ -0.65
RTN3-214ENST00000545432 GPHB5Q86YW7 130 aa10.96□□□□□ -0.65
RTN3-214ENST00000545432 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.96□□□□□ -0.65
RTN3-214ENST00000545432 DYNLRB2Q8TF09 96 aa10.96□□□□□ -0.65
RTN3-214ENST00000545432 APH1BQ8WW43 257 aa10.96□□□□□ -0.65
RTN3-214ENST00000545432 TM2D1Q9BX74 207 aa10.96□□□□□ -0.65
RTN3-214ENST00000545432 OR1A1Q9P1Q5 309 aa10.96□□□□□ -0.65
RTN3-214ENST00000545432 DNAH11Q96DT5 4516 aa10.96□□□□□ -0.66
RTN3-214ENST00000545432 DNAH2Q9P225 4427 aa10.96□□□□□ -0.66
RTN3-214ENST00000545432 PKHD1P08F94 4074 aa10.95□□□□□ -0.66
RTN3-214ENST00000545432 UBE2CO00762 179 aa10.95□□□□□ -0.66
RTN3-214ENST00000545432 EI24O14681 340 aa10.95□□□□□ -0.66
RTN3-214ENST00000545432 CBLN1P23435 193 aa10.95□□□□□ -0.66
RTN3-214ENST00000545432 HTR2CP28335 458 aa10.95□□□□□ -0.66
RTN3-214ENST00000545432 RPS27AP62979 156 aaKnown RBP10.95□□□□□ -0.66
RTN3-214ENST00000545432 RHOGP84095 191 aa10.95□□□□□ -0.66
RTN3-214ENST00000545432 ATP5G2Q06055 141 aa10.95□□□□□ -0.66
RTN3-214ENST00000545432 EXOSC2Q13868 293 aaKnown RBP10.95□□□□□ -0.66
RTN3-214ENST00000545432 KLK9Q2XQG4 91 aa10.95□□□□□ -0.66
RTN3-214ENST00000545432 TMEM61Q8N0U2 210 aa10.95□□□□□ -0.66
RTN3-214ENST00000545432 TTC9CQ8N5M4 171 aa10.95□□□□□ -0.66
RTN3-214ENST00000545432 SLC29A1Q99808 456 aa10.95□□□□□ -0.66
RTN3-214ENST00000545432 SLC35D1Q9NTN3 355 aa10.95□□□□□ -0.66
RTN3-214ENST00000545432 KLK9Q9UKQ9 250 aa10.95□□□□□ -0.66
RTN3-214ENST00000545432 ORC6Q9Y5N6 252 aa10.95□□□□□ -0.66
RTN3-214ENST00000545432 SPRY2O43597 315 aa10.94□□□□□ -0.66
RTN3-214ENST00000545432 GGCTO75223 188 aaKnown RBP10.94□□□□□ -0.66
RTN3-214ENST00000545432 CD1AP06126 327 aa10.94□□□□□ -0.66
RTN3-214ENST00000545432 UBBP0CG47 229 aa10.94□□□□□ -0.66
RTN3-214ENST00000545432 PRR20EP86478 221 aa10.94□□□□□ -0.66
RTN3-214ENST00000545432 PRR20CP86479 221 aa10.94□□□□□ -0.66
RTN3-214ENST00000545432 PRR20DP86480 221 aa10.94□□□□□ -0.66
RTN3-214ENST00000545432 PRR20BP86481 221 aa10.94□□□□□ -0.66
RTN3-214ENST00000545432 PRR20AP86496 221 aa10.94□□□□□ -0.66
RTN3-214ENST00000545432 TAGLNQ01995 201 aaKnown RBP10.94□□□□□ -0.66
RTN3-214ENST00000545432 NKAIN3Q8N8D7 197 aa10.94□□□□□ -0.66
RTN3-214ENST00000545432 TEX45Q8NA69 505 aa10.94□□□□□ -0.66
RTN3-214ENST00000545432 NECAP1Q8NC96 275 aa10.94□□□□□ -0.66
RTN3-214ENST00000545432 PHLDA1Q8WV24 401 aaPredicted RBP10.94□□□□□ -0.66
RTN3-214ENST00000545432 RNF183Q96D59 192 aa10.94□□□□□ -0.66
RTN3-214ENST00000545432 DERL3Q96Q80 235 aa10.94□□□□□ -0.66
RTN3-214ENST00000545432 ZNF221Q9UK13 617 aa10.94□□□□□ -0.66
RTN3-214ENST00000545432 MGAT4AQ9UM21 535 aa10.94□□□□□ -0.66
RTN3-214ENST00000545432 DNAH17Q9UFH2 4485 aa10.94□□□□□ -0.66
RTN3-214ENST00000545432 TRAV25A0A0B4J276 109 aa10.93□□□□□ -0.66
RTN3-214ENST00000545432 IGKV1-6A0A0C4DH72 117 aa10.93□□□□□ -0.66
RTN3-214ENST00000545432 KIR2DL5BA0A0G2JN68 375 aa10.93□□□□□ -0.66
RTN3-214ENST00000545432 KIR2DL5BA0A0G2JPC4 375 aa10.93□□□□□ -0.66
RTN3-214ENST00000545432 TMEM213A2RRL7 107 aa10.93□□□□□ -0.66
RTN3-214ENST00000545432 A8MWP6 167 aa10.93□□□□□ -0.66
RTN3-214ENST00000545432 TUSC2O75896 110 aa10.93□□□□□ -0.66
RTN3-214ENST00000545432 C8orf88P0DMB2 117 aa10.93□□□□□ -0.66
RTN3-214ENST00000545432 QRFPP83859 136 aa10.93□□□□□ -0.66
RTN3-214ENST00000545432 PRSS8Q16651 343 aa10.93□□□□□ -0.66
RTN3-214ENST00000545432 ANKRD55Q3KP44 614 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms