RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 IRF1P10914 325 aa4.36□□□□□ -1.71
UBE4A-203ENST00000545354 PPICP45877 212 aa4.36□□□□□ -1.71
UBE4A-203ENST00000545354 RPS24P62847 133 aaKnown RBP4.36□□□□□ -1.71
UBE4A-203ENST00000545354 MEF2CQ06413 473 aaPredicted RBP4.36□□□□□ -1.71
UBE4A-203ENST00000545354 TUSC3Q13454 348 aa4.36□□□□□ -1.71
UBE4A-203ENST00000545354 GGTLC2Q14390 218 aa4.36□□□□□ -1.71
UBE4A-203ENST00000545354 MPV17L2Q567V2 206 aa4.36□□□□□ -1.71
UBE4A-203ENST00000545354 TMEM64Q6YI46 380 aa4.36□□□□□ -1.71
UBE4A-203ENST00000545354 MEX3DQ86XN8 651 aaKnown RBP4.36□□□□□ -1.71
UBE4A-203ENST00000545354 ABHD12Q8N2K0 398 aa4.36□□□□□ -1.71
UBE4A-203ENST00000545354 SUMF1Q8NBK3 374 aa4.36□□□□□ -1.71
UBE4A-203ENST00000545354 OR51H1Q8NH63 302 aa4.36□□□□□ -1.71
UBE4A-203ENST00000545354 C2orf15Q8WU43 125 aaKnown RBP4.36□□□□□ -1.71
UBE4A-203ENST00000545354 TMEM37Q8WXS4 190 aa4.36□□□□□ -1.71
UBE4A-203ENST00000545354 PLEKHB2Q96CS7 222 aa4.36□□□□□ -1.71
UBE4A-203ENST00000545354 VGLL1Q99990 258 aa4.36□□□□□ -1.71
UBE4A-203ENST00000545354 NDC1Q9BTX1 674 aa4.36□□□□□ -1.71
UBE4A-203ENST00000545354 TM2D2Q9BX73 214 aa4.36□□□□□ -1.71
UBE4A-203ENST00000545354 COMMD5Q9GZQ3 224 aa4.36□□□□□ -1.71
UBE4A-203ENST00000545354 UBE2TQ9NPD8 197 aaPredicted RBP4.36□□□□□ -1.71
UBE4A-203ENST00000545354 MRPL17Q9NRX2 175 aaKnown RBP4.36□□□□□ -1.71
UBE4A-203ENST00000545354 C20orf141Q9NUB4 165 aa4.36□□□□□ -1.71
UBE4A-203ENST00000545354 LAMTOR3Q9UHA4 124 aa4.36□□□□□ -1.71
UBE4A-203ENST00000545354 LAMP3Q9UQV4 416 aa4.36□□□□□ -1.71
UBE4A-203ENST00000545354 INSIG2Q9Y5U4 225 aa4.36□□□□□ -1.71
UBE4A-203ENST00000545354 MICAL3Q7RTP6 2002 aa4.36□□□□□ -1.71
UBE4A-203ENST00000545354 ARFGEF1Q9Y6D6 1849 aa4.36□□□□□ -1.71
UBE4A-203ENST00000545354 SBF1O95248 1867 aa4.35□□□□□ -1.71
UBE4A-203ENST00000545354 TRAV24A0A0B4J272 114 aa4.35□□□□□ -1.71
UBE4A-203ENST00000545354 OR4C45A6NMZ5 311 aa4.35□□□□□ -1.71
UBE4A-203ENST00000545354 NEURL1BA8MQ27 555 aa4.35□□□□□ -1.71
UBE4A-203ENST00000545354 GGTLC3B5MD39 225 aa4.35□□□□□ -1.71
UBE4A-203ENST00000545354 USP17L23D6RBM5 183 aa4.35□□□□□ -1.71
UBE4A-203ENST00000545354 STK17BO94768 372 aa4.35□□□□□ -1.71
UBE4A-203ENST00000545354 SRP19P09132 144 aaKnown RBP4.35□□□□□ -1.71
UBE4A-203ENST00000545354 ACP5P13686 325 aa4.35□□□□□ -1.71
UBE4A-203ENST00000545354 HOXB4P17483 251 aaPredicted RBP4.35□□□□□ -1.71
UBE4A-203ENST00000545354 SLC25A1P53007 311 aa4.35□□□□□ -1.71
UBE4A-203ENST00000545354 ID3Q02535 119 aa4.35□□□□□ -1.71
UBE4A-203ENST00000545354 FOXF1Q12946 379 aa4.35□□□□□ -1.71
UBE4A-203ENST00000545354 GGTA1PQ4G0N0 100 aa4.35□□□□□ -1.71
UBE4A-203ENST00000545354 HLA-DQA1Q5Y7H0 255 aa4.35□□□□□ -1.71
UBE4A-203ENST00000545354 AMTNQ6UX39 209 aa4.35□□□□□ -1.71
UBE4A-203ENST00000545354 DNM1P46Q6ZS02 220 aa4.35□□□□□ -1.71
UBE4A-203ENST00000545354 FAM214BQ7L5A3 538 aa4.35□□□□□ -1.71
UBE4A-203ENST00000545354 BCDIN3DQ7Z5W3 292 aaKnown RBP4.35□□□□□ -1.71
UBE4A-203ENST00000545354 ANKRD37Q7Z713 158 aa4.35□□□□□ -1.71
UBE4A-203ENST00000545354 SLC25A42Q86VD7 318 aa4.35□□□□□ -1.71
UBE4A-203ENST00000545354 MRPL30Q8TCC3 161 aaKnown RBP4.35□□□□□ -1.71
UBE4A-203ENST00000545354 AGMATQ9BSE5 352 aa4.35□□□□□ -1.71
UBE4A-203ENST00000545354 CST11Q9H112 138 aa4.35□□□□□ -1.71
UBE4A-203ENST00000545354 TRAPPC1Q9Y5R8 145 aa4.35□□□□□ -1.71
UBE4A-203ENST00000545354 MPC1Q9Y5U8 109 aa4.35□□□□□ -1.71
UBE4A-203ENST00000545354 CACNA1SQ13698 1873 aa4.35□□□□□ -1.71
UBE4A-203ENST00000545354 DDX60Q8IY21 1712 aaKnown RBP4.35□□□□□ -1.71
UBE4A-203ENST00000545354 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 RIIAD1A6NNX1 92 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 PITX3O75364 302 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 KLF7O75840 302 aaPredicted RBP4.34□□□□□ -1.71
UBE4A-203ENST00000545354 DPM2O94777 84 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 ZNF682O95780 498 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 CXorf1O96002 111 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 PRH1P02810 166 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 NHLRC4P0CG21 123 aaPredicted RBP4.34□□□□□ -1.71
UBE4A-203ENST00000545354 LINC00694P0DN24 101 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 LEPP41159 167 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 GALR1P47211 349 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 MYBPHQ13203 477 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 IL17AQ16552 155 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 ZNF672Q499Z4 452 aaPredicted RBP4.34□□□□□ -1.71
UBE4A-203ENST00000545354 MFSD12Q6NUT3 480 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 FAM231DQ6ZW35 169 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 LINC00471Q8N535 108 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 TMEM86BQ8N661 226 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 OR10G2Q8NGC3 310 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 OR5D14Q8NGL3 314 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 OR2I1PQ8NGU4 316 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 OVCA2Q8WZ82 227 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 C1RLQ9NZP8 487 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 PROCRQ9UNN8 238 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 POLR1DQ9Y2S0 133 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 CSAG2Q9Y5P2 127 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 PXMP4Q9Y6I8 212 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 ARAP2Q8WZ64 1704 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 CUL9Q8IWT3 2517 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 LOC102723971A0A1B0GUV8 181 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 CEACAM18A8MTB9 384 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 CCDC179H3BU77 68 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 NKX2-2O95096 273 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 HOXB7P09629 217 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 NBL1P41271 181 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 MTCP1P56278 107 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 RBM11P57052 281 aaKnown RBP4.34□□□□□ -1.71
UBE4A-203ENST00000545354 KRTDAPP60985 99 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 WDR5P61964 334 aaKnown RBP4.34□□□□□ -1.71
UBE4A-203ENST00000545354 C4orf26Q17RF5 130 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 DCAF12Q5T6F0 453 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 GJB7Q6PEY0 223 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 ZNF841Q6ZN19 808 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 MOB3BQ86TA1 216 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms